1.Isolation of Vibrio cholerae and other enteric microbiota from patients.
Kas MP ; Horwood PF ; Laman M ; Manning L ; Atua V ; Siba PM ; Greenhill AR.
Papua New Guinea medical journal 2013;56(3-4):110-115
When cholera was first detected in Papua New Guinea (PNG) in mid-2009, national diagnostic capacity faced many challenges. This was in part due to the non-endemic status of the outbreak, resulting in few local staff experienced in Vibrio cholerae detection and poor access to the required consumables. The PNG Institute of Medical Research conducted culture on specimens from suspected cholera patients in Madang Province, with presumptive V. cholerae isolates sent to Goroka for confirmation. Of 98 samples analysed 15 were culture positive, with V. cholerae detected by polymerase chain reaction (PCR) in an additional 3 samples. Further analyses were conducted to identify other pathogenic bacteria from thiosulphate citrate bile salt sucrose (TCBS) agar. Molecular-based assays detected enteropathogenic (n = 1) and enterotoxigenic (n = 1) strains of Escherichia coli. No other major enteric pathogens were detected. The low detection rate of V. cholerae at the provincial level reflects challenges in the laboratory diagnosis of cholera and in-country challenges in responding to an outbreak of a non-endemic disease, such as lack of in-country diagnostic expertise and available consumables in the early stages. It also suggests that full aetiological investigations are warranted in future outbreaks of acute watery diarrhoea in PNG to fully elucidate the potentially complex aetiology, which could in turn guide diagnostic, treatment and prevention measures.
Cholera/*epidemiology/*microbiology
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*Disease Outbreaks
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Enterobacteriaceae/isolation & purification
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Feces/microbiology
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Humans
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Immunoassay
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Papua New Guinea/epidemiology
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Polymerase Chain Reaction
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Vibrio cholerae/*isolation & purification
2.Evaluation of a rapid immunochromatographic assay for the detection of rotavirus, norovirus and adenovirus from children hospitalized with acute watery diarrhoea.
Kas MP ; Maure T ; Soli KW ; Umezaki M ; Morita A ; Bebes S ; Jonduo MH ; Larkins JA ; Luang-Suarkia D ; Siba PM ; Greenhill AR ; Horwood PF.
Papua New Guinea medical journal 2013;56(3-4):141-144
We evaluated the IP-Triple I immunochromatographic rapid test for the detection of rotavirus, norovirus and adenovirus using stool samples from children with diarrhoea. The detection of norovirus and adenovirus was poor compared to polymerase chain reaction assays. However, high sensitivity (92%) and specificity (99%) were obtained for the detection of rotavirus.
Adenoviridae/*isolation & purification
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*Child, Hospitalized
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Child, Preschool
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Diarrhea/*virology
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Disease Outbreaks
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Feces/virology
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Female
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Humans
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Immunochromatography/*methods
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Infant
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Infant, Newborn
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Male
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Norovirus/*isolation & purification
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Polymerase Chain Reaction
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Rotavirus/*isolation & purification
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Sensitivity and Specificity