1.Frequency of FCGR3B Alleles in Thai Blood Donors.
Chollanot KASET ; Nipapan LEETRAKOOL ; Kamphon INTHARANUT ; Oytip NATHALANG
Annals of Laboratory Medicine 2013;33(6):426-430
BACKGROUND: Human neutrophil antigens (HNAs) are involved in autoimmune and alloimmune neutropenia and transfusion-related acute lung injury. The HNA-1 system is important in immunogenetics, and allele frequencies have been described in different populations. This study investigated the frequency of FCGR3B alleles encoding HNA-1a, HNA-1b, and HNA-1c among Thai blood donors and compared these frequencies with those previously reported for other populations. METHODS: Eight hundred DNA samples obtained from unrelated healthy blood donors at the National Blood Centre, Thai Red Cross Society, Bangkok, and the Blood Bank, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand, were included. Samples were simultaneously typed for each FCGR3B allele using an in-house polymerase chain reaction with sequence-specific primer (PCR-SSP) technique. RESULTS: The frequencies of FCGR3B*1, FCGR3B*2, and FCGR3B*3 alleles in central Thai blood donors were 0.548, 0.452, and 0.004, respectively; only FCGR3B*1 and FCGR3B*2 alleles were found in northern Thai blood donors (0.68 and 0.32, respectively). Compared with other Asian populations, central Thais had higher frequencies of the FCGR3B*2 allele (P<0.001), while the frequencies of the FCGR3B*1 and FCGR3B*2 alleles in northern Thais were similar to those previously reported in Taiwanese and Japanese populations. In contrast, the frequencies of the FCGR3B*1 and FCGR3B*2 alleles in the northern Thai population were statistically different from those observed in central Thai, Korean, German, and Turkish populations. CONCLUSIONS: FCGR3B allele frequencies were significantly different between central and northern Thai blood donors. Our in-house PCR-SSP method is a simple, cost-effective, and convenient method for FCGR3B allele detection.
Asian Continental Ancestry Group/*genetics
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*Blood Donors
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DNA/analysis
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DNA Primers/chemistry/metabolism
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GPI-Linked Proteins/genetics
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Gene Frequency
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Genotype
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Humans
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Polymerase Chain Reaction
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Receptors, IgG/*genetics
;
Thailand
2.Duffy Blood Group Genotyping in Thai Blood Donors.
Oytip NATHALANG ; Kamphon INTHARANUT ; Kanokpol SIRIPHANTHONG ; Siriporn NATHALANG ; Pawinee KUPATAWINTU
Annals of Laboratory Medicine 2015;35(6):618-623
BACKGROUND: Duffy (FY) blood group genotyping is important in transfusion medicine because Duffy alloantibodies are associated with delayed hemolytic transfusion reactions and hemolytic disease of the fetus and newborn. In this study, FY allele frequencies in Thai blood donors were determined by in-house PCR with sequence-specific primers (PCR-SSP), and the probability of obtaining compatible blood for alloimmunized patients was assessed. METHODS: Five hundred blood samples from Thai blood donors of the National Blood Centre, Thai Red Cross Society, were included. Only 200 samples were tested with anti-Fy(a) and anti-Fy(b) using the gel technique. All 500 samples and four samples from a Guinea family with the Fy(a-b-) phenotype were genotyped by using PCR-SSP. Additionally, the probability of obtaining antigen-negative red blood cells (RBCs) for alloimmunized patients was calculated according to the estimated FY allele frequencies. RESULTS: The FY phenotyping and genotyping results were in 100% concordance. The allele frequencies of FY*A and FY*B in 500 central Thais were 0.962 (962/1,000) and 0.038 (38/1,000), respectively. Although the Fy(a-b-) phenotype was not observed in this study, FY*B(ES)/FY*B(ES) was identified by PCR-SSP in the Guinea family and was confirmed by DNA sequencing. CONCLUSIONS: Our results confirm the high frequency of the FY*A allele in the Thai population, similar to that of Asian populations. At least 500 Thai blood donors are needed to obtain two units of antigen-negative RBCs for the Fy(a-b+) phenotype.
Adult
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Alleles
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Asian Continental Ancestry Group/genetics
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Base Sequence
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Blood Donors
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DNA/chemistry/genetics/metabolism
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Duffy Blood-Group System/*genetics/immunology
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Female
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Gene Frequency
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Genotype
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Humans
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Isoantibodies/blood/immunology
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Male
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Middle Aged
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Phenotype
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Polymerase Chain Reaction
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Receptors, Cell Surface/genetics/*immunology
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Sequence Analysis, DNA
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Thailand
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Young Adult
3.Impact of using genotyping to predict SERF negative phenotype in Thai blood donor populations
Oytip NATHALANG ; Kamphon INTHARANUT ; Nipapan LEETRAKOOL ; Supattra MITUNDEE ; Pawinee KUPATAWINTU
Blood Research 2020;55(2):107-111
Background:
SERF(+) is a high prevalence antigen in the Cromer blood group system that is encoded by a CROM*01.12 allele. The SERF(-) on red cells is caused by a single nucleotide variation, c.647C>T, in exon 5 of the Decay-accelerating factor, DAF gene. Alloanti-SERF was found in a pregnant Thai woman, and a SERF(-) individual was found among Thai blood donors. Since anti-SERF is commercially unavailable, this study aimed to develop appropriate genotyping methods for CROM*01.12 and CROM*01.-12 alleles and predict the SERF(-) phenotype in Thai blood donors.
Methods:
DNA samples obtained from 1,580 central, 300 northern, and 427 southern Thai blood donors were genotyped for CROM*01.12 and CROM*01.-12 allele detection using in-house PCR with sequence-specific primer (PCR-SSP) confirmed by DNA sequencing.
Results:
Validity of the PCR-SSP genotyping results agreed with DNA sequencing; CROM*01.12/ CROM*01.12 was the most common (98.42%, 98.00%, and 98.59%), followed by CROM*01.12/CROM*01.-12 (1.58%, 2.00%, and 1.41%) among central, northern, and southern Thais, respectively. CROM*01.-12/CROM*01.-12 was not detected in all three populations. The alleles found in central Thais did not significantly differ from those found in northern and southern Thais.
Conclusion
This study is the first to distinguish the predicted SERF phenotypes from genotyping results obtained using in-house PCR-SSP, confirming that the CROM*01.-12 allele frequency ranged from 0.007 to 0.010 in three Thai populations. This helps identify the SERF(-) phenotype among donors and patients, ultimately preventing adverse transfusion reactions.
4.Determining of JK*A and JK*B Allele Frequency Distribution among Muslim Blood Donors from Southern Thailand
Ubonwan Puobon ; Kamphon Intharanut ; Supattra Mitundee ; Oytip Nathalang
Malaysian Journal of Medical Sciences 2019;26(1):58-65
Background: The Kidd (JK) blood group system is of clinical importance in transfusion
medicine. JK*A and JK*B allele detections are useful in genetic anthropological studies. This study
aimed to determine the frequencies of JK*A and JK*B alleles among Muslim blood donors from
Southern Thailand and to compare how they differ from those of other populations that have been
recently studied.
Methods: A cross-sectional study was used. Totally, 427 samples of dissimilar Thai-
Muslim healthy blood donors living in three southern border provinces were selected via simple
random sampling (aged 17–65 years old) and donors found to be positive for infectious markers
were excluded. All samples were analysed for JK*A and JK*B alleles using PCR-SSP. The Pearson’s
chi-squared and Fisher exact tests were used to compare the JK frequencies among southern Thai-
Muslim with those among other populations previously reported.
Results: A total of 427 donors—315 males and 112 females, with a median age of 29 years
(interquartile range: 18 years)—were analysed. A JK*A/JK*B genotype was the most common, and
the JK*A and JK*B allele frequencies among the southern Thai-Muslims were 55.2% and 44.8%,
respectively. Their frequencies significantly differed from those of the central Thai, Korean,
Japanese, Brazilian–Japanese, Chinese, Filipino, Africans and American Natives populations
(P < 0.05). Predicted JK phenotypes were compared with different groups of Malaysians. The
Jk(a+b+) phenotype frequency among southern Thai-Muslims was significantly higher than that of
Malaysian Malays and Indians (P < 0.05).
Conclusions: The JK*A and JK*B allele frequencies in a southern Thai-Muslim population
were determined, which can be applied not only to solve problems in transfusion medicine but also
to provide tools for genetic anthropology and population studies.