1.Management and prevention of HBV reactivation in the context of immunosuppression
Kaihui DONG ; Yina FANG ; Yiwen KUI
Journal of Clinical Hepatology 2018;34(10):2213-2216
HBV reactivation is commonly seen during immunosuppressive therapy and is associated with high incidence and mortality rates due to hepatitis outbreak and liver decompensation, and therefore, it should be taken seriously. However, the prevention and management of this potential complication is still a difficulty in clinical practice. This article reviews the diagnostic criteria and clinical outcomes of HBV reactivation, discusses the association of immunosuppressive therapy with the risk of HBV reactivation, and outlines the strategies for the prevention of HBV reactivation and recent advances. It is pointed out that early identification of patients with HBV infection before immunosuppressive therapy is of vital importance, and the initiation of antiviral therapy at the right moment based on risk stratification can effectively reduce the risk of HBV reactivation. We hope that this review can increase the awareness of HBV reactivation among clinicians and provide an effective reference for optimizing the management and prevention of HBV infection.
2.Identification of two novel SLC19A3 variants in a Chinese patient with Biotin-thiamine responsive basal ganglia disease
Min GAO ; Yan HUANG ; Kaihui ZHANG ; Yuqing LYU ; Rui DONG ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(2):162-165
Objective To explore the genetic basis for a neonate featuring global developmental delay.Methods Clinical and laboratory tests were carried out for the patient.Peripheral venous blood samples were collected from the neonate and his parents for the extraction of DNA.Potential variant was detected by using targeted capture and next generation sequencing for a panel of genes associated with nervous system diseases.Suspected variant was validated by Sanger sequencing.Results The nine-month-old boy manifested global developmental delay and was unstable to sit alone and distinguish strangers from acquaintance.Genetic testing revealed two novel variants of the SLC19A3 gene in him,namely c.448G> A and c.169C>T.The amino acids encoded by the two codons are highly conservative,and both variants were predicted to be pathogenic by bioinformatic analysis.Conclusion The compound heterozygous c.448G>A and c.169C>T variants probably underlay the onset of disease in the patient.Above finding also enriched the variant spectrum of SLC19A3 gene underlying Biotin-thiamine responsive basal ganglia disease.
3.Clinical and molecular cytogenetic analysis of a family with mental retardation caused by an unbalanced translocation involving chromosomes 3 and 22.
Kaihui ZHANG ; Rui DONG ; Yan HUANG ; Yali YANG ; Ying WANG ; Haiyan ZHANG ; Yufeng ZHANG ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2017;34(1):30-34
OBJECTIVETo explore the genetic cause of a Chinese boy with unexplained mental retardation, and analyze the pattern of inheritance for his family.
METHODSRoutine karyotyping, chromosomal microarray analysis (CMA), and fluorescence in situ hybridization (FISH) were used to detect chromosome abnormalities in the patient and his families.
RESULTSChromosome analysis suggested that the proband and 7 affected individuals had an identical karyotype 46,XN,der(22)t(3;22)(q28;q13)pat, while his father and 5 other relatives carried a same karyotype of 46,XN,t(3;22)(q28;q13). His mother and other family members were normal. CMA analysis confirmed that the patient had a 9.0 Mb duplication at 3q28q29, in addition with a 1.7 Mb deletion at 22q13.3. Above results were confirmed by FISH.
CONCLUSIONThe abnormal phenotypes of the proband and his family members from five generations have conformed to those of 3q duplication and 22q13.3 deletion caused by unbalanced translocation involving chromosomes 3q and 22q. The presence of multiple patients in this family may be attributed to abnormal gametes produced by parental balanced translocations involving 3q and 22q.
Chromosome Deletion ; Chromosome Duplication ; Chromosomes, Human, Pair 22 ; genetics ; Chromosomes, Human, Pair 3 ; genetics ; Cytogenetic Analysis ; methods ; Family Health ; Female ; Humans ; In Situ Hybridization, Fluorescence ; Infant ; Intellectual Disability ; genetics ; Karyotyping ; Male ; Pedigree ; Translocation, Genetic
4.Molecular cytogenetic analysis of a case with ring chromosome 3 syndrome.
Kaihui ZHANG ; Fengling SONG ; Dongdong ZHANG ; Haiyan ZHANG ; Ying WANG ; Rui DONG ; Yufeng ZHANG ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2016;33(6):816-819
OBJECTIVETo investigate the genetic cause for a child with developmental delay and congenital heart disease through molecular cytogenetic analysis.
METHODSG-banded karyotyping and chromosomal microarray analysis (CMA) were performed for the patient and his parents.
RESULTSThe proband's karyotype was detected as ring chromosome 3, and a 3q26.3-25.3 deletion encompassing 45 genes has been found with CMA. Testing of both parents was normal.
CONCLUSIONClinical phenotype of the patient with ring chromosome 3 mainly depends on the involved genes. It is necessary to combine CMA and karyotyping for the diagnosis of ring chromosome, as CMA can provide more accurate information for variations of the genome.
Chromosomes, Human, Pair 3 ; genetics ; Cytogenetic Analysis ; methods ; Cytogenetics ; methods ; Developmental Disabilities ; genetics ; Female ; Heart Defects, Congenital ; genetics ; Humans ; Infant ; Karyotyping ; methods ; Ring Chromosomes ; Syndrome
5.Genetic analysis of a child with XYY syndrome mainly featuring mental retardation.
Yi LIU ; Rui DONG ; Kaihui ZHANG ; Ying WANG ; Haiyan ZHANG ; Yanqing ZHANG ; Dongmei ZHAO ; Zhongtao GAI
Chinese Journal of Medical Genetics 2016;33(5):686-689
OBJECTIVETo explore the genetic cause for a boy featuring mainly with mental retardation.
METHODSG-banding karyotyping and fluorescence in situ hybridization (FISH) were carried out for the child and his parents. The child was also analyzed with chromosome microarray (CMA). Suspected microdeletion was validated with quantitative PCR.
RESULTSThe proband was found to have a 47,XYY karyotype by both chromosome and FISH analyses, while both of his parents had a normal karyotype. CMA suggested that the proband had one copy of X chromosome and two copies of Y chromosome. In addition, CMA has also detected deletion of the KYNU gene (mapped at 2q22.2), which could be pathogenic. The result was confirmed by qPCR.
CONCLUSIONFor its high resolution, CMA can be used to identify potential microdeletion/duplications among children with chromosome aneuploidy and unusual phenotypes.
Adult ; Child, Preschool ; Chromosome Banding ; Female ; Humans ; In Situ Hybridization, Fluorescence ; Intellectual Disability ; genetics ; Karyotyping ; Male ; Oligonucleotide Array Sequence Analysis ; methods ; Polymorphism, Single Nucleotide ; Sex Chromosome Disorders ; diagnosis ; genetics ; XYY Karyotype ; diagnosis ; genetics
6.Analysis of ADNP gene variant in a child with Helsmoortel-van der Aa syndrome.
Jian MA ; Haixia MA ; Kaihui ZHANG ; Yuqiang LYU ; Min GAO ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2022;39(4):428-432
OBJECTIVE:
To explore the genetic basis for a child manifesting with intellectual disability, language delay and autism spectrum disorder.
METHODS:
Genomic DNA was extracted from peripheral blood samples of the child and his family members, and subjected to whole exome sequencing. Candidate variants were verified by Sanger sequencing and interpreted according to the guidelines of the American College of Medical Genetics and Genomics.
RESULTS:
The child was found to harbor a heterozygous c.568C>T (p.Q190X) nonsense variant of the ADNP gene, which was not detected in either parent by Sanger sequencing.
CONCLUSION
The clinical and genetic testing both suggested that the child has Helsmoortel-van der Aa syndrome due to ADNP gene mutation, which is extremely rare in China.
Abnormalities, Multiple/genetics*
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Autism Spectrum Disorder/genetics*
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Autistic Disorder/genetics*
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Child
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Heterozygote
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Homeodomain Proteins/genetics*
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Humans
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Intellectual Disability/genetics*
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Mutation
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Nerve Tissue Proteins/genetics*
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Rare Diseases
7.Analysis of clinical and genetic characteristics of a child with ring chromosome 4 syndrome.
Yuqiang LYU ; Fengling SONG ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Ya WAN ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2020;37(8):843-846
OBJECTIVE:
To explore the genetic basis for a child featuring short stature.
METHODS:
G-banded karyotyping, chromosomal microarray analysis (CMA) and high-throughput sequencing were carried out on peripheral blood sample from the child.
RESULTS:
The karyotype of the child was ascertained as 45,XY,-4[3]/46,XY,r(4)(p16q35)[84]/47,XY,-4,r(4)(p16q25)*2[7]/48,XY,-4,r(4)(p16q35)*3[1]/46,XY,dic r(4;4)(p16q35;p16q35)[2]/46,XY,add(4)(p16)[3]. A 647 kb deletion at 4p16.3 was identified by CMA, which encompassed 6 OMIM genes including ZNF141, PIGG, PDE6B, ATP5I, PCGF3 and MYL5. High-throughput sequencing has identified no pathogenic/likely pathogenic variants consistent with the clinical symptoms.
CONCLUSION
A rare ring chromosome 4 syndrome was identified by combined chromosomal karyotyping, CMA and high-throughput sequencing. Conventional cytogenetic analysis and genetic testing in combine have enabled the diagnosis in this case.
8.A case with autosomal dominant mental retardation type 5 due to de novo SYNGAP1 variant.
Zaifen GAO ; Yuqiang LYU ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(6):661-664
OBJECTIVE:
To investigate the clinical and genetic features of a Chinese girl featuring mental retardation, intellectual disability, language development delay and epilepsy.
METHODS:
G-banded chromosomal karyotyping was carried out for the child. Genomic DNA of the patient and her parents was extracted and subjected to high-throughput sequencing. The results were analyzed with bioinformatic tools and validated by Sanger sequencing.
RESULTS:
The karyotype of the child was ascertained as 46,XX. Sequencing result showed that she has carried a de novo heterozygous c.1861C>T (p.R621X) variant of the SYNGAP1 gene.
CONCLUSION
The nonsense variant c.1861C>T (p.R621X) of the SYNGAP1 gene probably underlies the disease in this child. Above result has enabled genetic diagnosis and counseling for her family.
9.Analysis of a case with Mowat-Wilson syndrome caused by ZEB2 gene variant.
Jian MA ; Yong LIU ; Kaihui ZHANG ; Yuqiang LYU ; Min GAO ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(5):539-542
OBJECTIVE:
To explore the genetic basis of a proband with distinctive facial features, global developmental delay, seizures and hypoplasia of corpus callosum through next generation sequencing (NGS).
METHODS:
Genomic DNA was extracted from peripheral blood samples of the proband and his family members. Whole exome and flanking sequences were screened by NGS. Suspected variants were verified by Sanger sequencing.
RESULTS:
The proband was found to carry a heterozygous c.2824G>T (p.G942X) variant of the ZEB2 gene, which was verified by Sanger sequencing to be a de novo variant.
CONCLUSION
The heterozygous c.2824G>T (p.G942X) variant of the ZEB2 gene probably underlies the Mowat-Wilson syndrome in the proband.
Facies
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Genetic Variation
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Heterozygote
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Hirschsprung Disease
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genetics
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Humans
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Intellectual Disability
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genetics
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Microcephaly
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genetics
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Whole Exome Sequencing
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Zinc Finger E-box Binding Homeobox 2
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genetics
10.Diagnosis of Bainbridge-Ropers syndrome due to de novo ASXL3 variant by high throughput sequencing.
Yuqiang LYU ; Dongmei ZHAO ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(4):452-454
OBJECTIVE:
To explore the clinical and genetic features of a patient with mental retardation.
METHODS:
G-Banding chromosomal karyotyping and high-throughput sequencing was carried out for the child. Suspected variant was validated in his family by Sanger sequencing and bioinformatic analysis.
RESULTS:
The patient was found to carry a de novo heterozygous c.4090G>T (p.Gly1364X) variant of the ASXL3 gene, which was known to predispose to Bainbridge-Ropers syndrome.
CONCLUSION
The nonsense c.4090G>T (p.Gly1364X) variant probably accounts for the disease in this patient.
Child
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Codon, Nonsense
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Developmental Disabilities
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genetics
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High-Throughput Nucleotide Sequencing
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Humans
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Intellectual Disability
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genetics
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Phenotype
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Syndrome
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Transcription Factors
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genetics