1.Regression Models for Haplotype-Based Association Studies.
So Hee OH ; Jung Hyun NAMKUNG ; Tae Sung PARK
Genomics & Informatics 2007;5(1):19-23
In this paper, we provide an overview of statistical models for haplotype-based association studies, and summarize their features based on the design matrix. We classify the design matrix into the two types: direct and indirect. For these two kinds of matrices, we present and compare characteristics using a simple hypothetical example, and a real data set. The motivation behind this study was to provide practitioners with an improved understanding, to facilitate the informed selection of the appropriate haplotype-based model and to improve the interpretability of the models.
Case-Control Studies
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Dataset
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Haplotypes
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Models, Statistical
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Motivation
2.Are Podoplanin Gene Polymorphisms Associated with Atopic Dermatitis in Koreans?.
Jung Hyun NAMKUNG ; Eugene KIM ; Yong Doo PARK ; Geontae PARK ; Jun Mo YANG
Annals of Dermatology 2015;27(3):275-282
BACKGROUND: The histologic characteristics of atopic dermatitis (AD) include perivascular edema and dilated tortuous vessels in the papillary dermis. A single nucleotide polymorphism (SNP) of the fms-related tyrosine kinase 4 (FLT4) gene is associated with AD. OBJECTIVE: To investigate the associations between podoplanin (PDPN) gene SNPs and AD. METHODS: We genotyped 9 SNPs from 5 genes of 1,119 subjects (646 AD patients and 473 controls). We determined the promoter activity of 1 SNP (rs355022) by luciferase assay; this SNP was further investigated using 1,133 independent samples (441 AD patients and 692 controls). RESULTS: The rs355022 and rs425187 SNPs and the C-A haplotype in the PDPN gene were significantly associated with intrinsic AD in the initial experiment. The rs355022 SNP significantly affected promoter activity in the luciferase assay. However, these results were not replicated in the replication study. CONCLUSION: Two SNPs and the C-A haplotype in the PDPN gene are significantly associated with intrinsic AD; although, the results were confirmed by luciferase assay, they could not be replicated with independent samples. Nevertheless, further replication experiments should be performed in future studies.
Dermatitis, Atopic*
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Dermis
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Edema
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Haplotypes
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Humans
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Luciferases
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Polymorphism, Genetic
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Polymorphism, Single Nucleotide
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Protein-Tyrosine Kinases
3.Persistent low-level elevation of serum human chorionic gonadotropin after termination of pregnancy: a rare case of peritoneal trophoblastic implant.
Hye Won SEO ; Min Jin JEONG ; Jung NAMKUNG ; Chan Joo KIM ; Ji Young KWON
Obstetrics & Gynecology Science 2017;60(6):616-620
Peritoneal trophoblastic implant can occur after treatment of ectopic pregnancy. Similarly, after termination of intrauterine pregnancy, trophoblastic implants are rare but can be a complication of perforation during dilatation and curettage. We report an extremely rare case of trophoblastic implant on the myometrium, ovarian surface, and peritoneal wall 4 months after uncomplicated dilatation and curettage. To the best of our knowledge, this is the first case of peritoneal trophoblastic implant following dilatation and curettage without uterine perforation. Knowledge of this case is useful for the management of patients with persistent low-level elevation of serum human chorionic gonadotropin after termination of pregnancy.
Animals
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Chorionic Gonadotropin*
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Dilatation and Curettage
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Female
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Humans*
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Mice
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Myometrium
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Pregnancy*
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Pregnancy, Ectopic
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Trophoblasts*
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Uterine Perforation
4.The Survey on Korean Menopausal Women's Behavior and Perception of Hormone Therapy.
Jeong NAMKUNG ; Youn Jee CHUNG ; Jae Eun HA ; Hyun Hee JO ; Eun Jung KIM ; Dong Jin KWON ; Young Ok LEW ; Jang Heub KIM ; Mee Ran KIM
The Journal of Korean Society of Menopause 2011;17(3):142-149
OBJECTIVES: After Women's Health Initiative (WHI) study had been published, the use of hormone therapy (HT) have been decreasing even though it is the most effective therapy for menopausal symptom. The survey was conducted to investigate Korean menopausal women's perception of HT and behavior when they are treated by HT. METHODS: During 4 weeks from September 2009 to October 2009, total 600 women aged 45~64 participated in the survey by face to face interview. Out of answering women, women who have visited clinic/hospital at least 1 time to treat their menopausal symptom during last 1 year were included. One hundred fifty women for each age group, 45~49, 50~54, 55~59 and 60~64, were recruited in consecutive order. RESULTS: Eighty percent women who have visited clinic/hospital to treat menopausal symptom, visited obstetrics and gynecology. Only 16% of these women were current user, and other 84% of these women had no experience of HT (53%) or stopped therapy (31%). Among current user, only 9% of women have used HT more than 5 years. Eighty percent of current user had used HT less than 2 years. Most distressing menopausal symptom is 'hot flush' regardless HT experience. When doctor recommend HT, 72% of patients accept HT in overall. Among women who had no experience of HT, the most common reason of not to take HT was concern of side effects (51%). And 67% of women who had concern of side effects worried about cancer incidence. CONCLUSION: Many women with menopausal symptom do not take HT even though it is the most effective therapy. Most of women who take HT stop treatment within 1 year. Most common reason of not to take HT is concern about side effect, increasing incidence of cancer related to HT. Therefore, HT should be considered to short-term relief of menopausal symptoms and at the minimal dose, if possible.
Aged
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Female
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Gynecology
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Humans
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Incidence
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Menopause
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Obstetrics
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Women's Health
5.A case of successful laparoscopic surgical staging in patient of Sertoli-Leydig cell tumor.
Min Jung SUH ; Sie Hyun YOU ; Joo Hyuk CHOI ; Eun Kyeong OH ; Jeong NAMKUNG ; Mi Sun PARK ; Eun Young JI ; Young Hwa KANG ; Joo Hee YOON
Korean Journal of Obstetrics and Gynecology 2007;50(7):1033-1038
Sertoli-Leydig cell tumors are rare sex cord-stromal tumors. These tumors account for less than 0.5% of all ovarian tumors. Because these tumors appear predominantly in young women (between the age of 30 and 40) and are bilateral in less than 1% of cases, conservative removal of the tumor and adjacent fallopian tube is justifiable. Recently, we experienced a case of successful laparoscopic surgical staging in patient of Sertoli-Leydig cell tumor which was previously incompletely evaluated in local OBGY clinic. There are no solid data to suggest that usefulness and risk of laparoscopic surgical staging and adjuvant therapy with stage I disease of these tumors until now. So we present it with a brief review of literature.
Fallopian Tubes
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Female
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Humans
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Sertoli-Leydig Cell Tumor*
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Sex Cord-Gonadal Stromal Tumors
6.The Efficacy of Ultrasonography in Identifying Fracture Patterns of Nasal Bone.
Ji Yeun LEE ; Heung Cheol KIM ; Sook NAMKUNG ; Myung Sun HONG ; Hee Rok JEONG ; Kyung Bum NAM ; Jung Min KIM ; Su Young PARK ; Hae Sung KIM ; Im Kyung HWANG
Journal of the Korean Society of Medical Ultrasound 2011;30(4):257-265
PURPOSE: The purpose of this study was to know whether ultrasonography is proper diagnostic tool for decision of treatment method or not, as compared the efficacy of US in allowing identifying fracture patterns of nasal bone with that of CT. MATERIALS AND METHODS: Fifty patients with nasal trauma were investigated prospectively by CT and US. According to CT and ultrasonographic findings, each case of nasal bone injury were rated as grade 1 (nasal injury but not fracture), grade 2 (simple fracture without displacement), grade 3 (unilateral simple fracture with displacement), grade 4 (bilateral simple fractures with displacement), and grade 5 (bilateral comminuted fractures with depression). Assessment for ultrasonographic method were defined as overestimations or underestimation according to whether the nasal fracture had been assigned a higher or lower grade at the review of the findings of CT. The correlation between the results of CT and ultrasonography were measured. RESULTS: In ultrasonographic estimation of grade of 50 cases of nasal bone injuries, there were correctly graded in 42 cases, overestimated in 5 cases, underestimated in 3 cases. In allowing accurate grading of nasal bone injury, images of nasal ultrasonography correlated closely with those of CT (r = 0.796). CONCLUSION: Nasal ultrasonography is a reliable method that allows appropriate grading of nasal bone injury and would be a useful first line imaging method in providing the detail necessary for proper management of patients with mild simple nasal bone injury.
Fractures, Comminuted
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Humans
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Nasal Bone
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Prospective Studies
7.Comparison of the Effects of Hormone Replacement Therapy on Bone Mineral Density, Lipid Profiles, and Biochemical Markers of Bone Metabolism.
Jeong NAMKUNG ; Jang Heub KIM ; Hyun Hee JO ; Eun Kyeong OH ; Keunyoung CHEON ; Dong Jin KWON ; Young Ok LEW ; Eun Jung KIM ; Seong Jin HWANG ; Jae Yen SONG ; Min Joung KIM ; Mee Ran KIM
The Journal of Korean Society of Menopause 2010;16(2):107-115
OBJECTIVES: To assess the effects of hormone replacement therapy on bone mineral density (BMD), biochemical markers of bone turnover, and lipid profiles in postmenopausal women. METHODS: We retrospectively reviewed the medical records of 199 postmenopausal women who had received care at the Department of Obstetrics and Gynecology of Catholic University Seoul St. Mary's Hospital between January 1994 and December 2008. The patients were divided into the following three groups: group 1 received combined estrogen and progesterone therapy (n = 91); group 2 received estrogen only (n = 65); and group 3 received tibolone (n = 43). We compared the changes in biochemical markers of bone turnover, lipid profiles, and BMD during therapy. RESULTS: The BMD of the lumbar spine increased in groups 1 and 3 by 2.0% and 1.2%, respectively, and the BMD of the total femur increased in groups 1 and 2 by 2.3% and 0.5% from the initial values after 3 years, respectively. However, the BMD of the femoral neck and total femur decreased significantly in group 3 by 4.8% and 1.9%, respectively, 3 years after treatment initiation (P < 0.05). Serum osteocalcin and urinary deoxypyridinoline decreased in all groups 1 year after treatment. In groups 1 and 3, the total cholesterol level decreased and the triglycerides level increased. However, there were no definite changes in the total cholesterol and triglycerides levels in group 2. The high density lipoprotein cholesterol (HDL)-cholesterol level increased in groups 1 and 2, but decreased in group 3. As a result, the BMD of the lumbar spine increased and the total cholesterol level decreased in the combined therapy and tibolone groups. Tibolone had no beneficial effect on the BMD of the femoral neck. CONCLUSION: Our results suggest that each therapy has different effects on BMD, biochemical markers of bone metabolism, and lipid profiles. A prospective study involving a larger group, and considering multiple factors, will be required to obtain more clinically meaningful conclusions.
Amino Acids
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Biomarkers
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Bone Density
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Cholesterol
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Cholesterol, HDL
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Estrogens
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Female
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Femur
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Femur Neck
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Gynecology
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Hormone Replacement Therapy
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Humans
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Lipoproteins
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Medical Records
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Norpregnenes
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Obstetrics
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Osteocalcin
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Progesterone
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Retrospective Studies
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Spine
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Triglycerides
8.Comparison of the Effects of Hormone Replacement Therapy on Bone Mineral Density, Lipid Profiles, and Biochemical Markers of Bone Metabolism.
Jeong NAMKUNG ; Jang Heub KIM ; Hyun Hee JO ; Eun Kyeong OH ; Keunyoung CHEON ; Dong Jin KWON ; Young Ok LEW ; Eun Jung KIM ; Seong Jin HWANG ; Jae Yen SONG ; Min Joung KIM ; Mee Ran KIM
The Journal of Korean Society of Menopause 2010;16(2):107-115
OBJECTIVES: To assess the effects of hormone replacement therapy on bone mineral density (BMD), biochemical markers of bone turnover, and lipid profiles in postmenopausal women. METHODS: We retrospectively reviewed the medical records of 199 postmenopausal women who had received care at the Department of Obstetrics and Gynecology of Catholic University Seoul St. Mary's Hospital between January 1994 and December 2008. The patients were divided into the following three groups: group 1 received combined estrogen and progesterone therapy (n = 91); group 2 received estrogen only (n = 65); and group 3 received tibolone (n = 43). We compared the changes in biochemical markers of bone turnover, lipid profiles, and BMD during therapy. RESULTS: The BMD of the lumbar spine increased in groups 1 and 3 by 2.0% and 1.2%, respectively, and the BMD of the total femur increased in groups 1 and 2 by 2.3% and 0.5% from the initial values after 3 years, respectively. However, the BMD of the femoral neck and total femur decreased significantly in group 3 by 4.8% and 1.9%, respectively, 3 years after treatment initiation (P < 0.05). Serum osteocalcin and urinary deoxypyridinoline decreased in all groups 1 year after treatment. In groups 1 and 3, the total cholesterol level decreased and the triglycerides level increased. However, there were no definite changes in the total cholesterol and triglycerides levels in group 2. The high density lipoprotein cholesterol (HDL)-cholesterol level increased in groups 1 and 2, but decreased in group 3. As a result, the BMD of the lumbar spine increased and the total cholesterol level decreased in the combined therapy and tibolone groups. Tibolone had no beneficial effect on the BMD of the femoral neck. CONCLUSION: Our results suggest that each therapy has different effects on BMD, biochemical markers of bone metabolism, and lipid profiles. A prospective study involving a larger group, and considering multiple factors, will be required to obtain more clinically meaningful conclusions.
Amino Acids
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Biomarkers
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Bone Density
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Cholesterol
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Cholesterol, HDL
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Estrogens
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Female
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Femur
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Femur Neck
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Gynecology
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Hormone Replacement Therapy
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Humans
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Lipoproteins
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Medical Records
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Norpregnenes
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Obstetrics
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Osteocalcin
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Progesterone
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Retrospective Studies
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Spine
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Triglycerides