1.In silico Analysis of Downstream Target Genes of Transcription Factors.
Sang Joon HWANG ; Sang Young CHUN ; Kyung Ah LEE
Korean Journal of Fertility and Sterility 2006;33(2):125-132
OBJECTIVE: In the previous study, we compiled the differentially expressed genes during early folliculogenesis.1 Objective of the present study was to identify downstream target genes of transcription factors (TFs) using bioinformatics for selecting the target TFs among the gene lists for further functional analysis. MATERIALS AND METHODS: By using bioinformatics tools, constituent domains were identified from database searches using Gene Ontology, MGI, and Entrez Gene. Downstream target proteins/genes of each TF were identified from database searches using TF database (TRANSFAC(R) 6.0) and eukaryotic promoter database (EPD). RESULTS: DNA binding and trans-activation domains of all TFs listed previously were identified, and the list of downstream target proteins/genes was obtained from searche of TF database and promoter database. Based on the known function of identified downstream genes and the domains, 3 (HNF4, PPARg, and TBX2) out of 26 TFs were selected for further functional analysis. The genes of wee1-like protein kinase and p21WAF1 (cdk inhibitor) were identified as potential downstream target genes of HNF4 and TBX2, respectively. PPARg, through protein-protein interaction with other protein partners, acts as a transcription regulator of genes of EGFR, p21WAF1, cycD1, p53, and VEGF. Among the selected 3 TFs, further study is in progress for HNF4 and TBX2, since wee1-like protein kinase and cdk inhibitor may involved in regulating maturation promoting factor (MPF) activity during early folliculogenesis. CONCLUSIONS: Approach used in the present study, in silico analysis of downstream target genes, was useful for analyzing list of TFs obtained from high-throughput cDNA microarray study. To verify its binding and functions of the selected TFs in early folliculogenesis, EMSA and further relevant characterizations are under investigation.
Computational Biology
;
Computer Simulation*
;
DNA
;
Gene Ontology
;
Maturation-Promoting Factor
;
Oligonucleotide Array Sequence Analysis
;
Protein Kinases
;
Transcription Factors*
;
Vascular Endothelial Growth Factor A
2.Traumatic Intracranial Aneurysm: A Case Report.
Kyung Ah CHUN ; Kyung Sub SHINN ; Si Won KANG ; Joon Hyun BALK
Journal of the Korean Radiological Society 1994;31(6):1029-1032
PURPOSE: The occurrence of traumatic aneurysm is rare in head injury, but this complication is important as it is a potentially treatable cause delayed onset of intracranial hemorrhage. Authors report one case of traumatic aneurysm involving A1 and A2 junction of anterior cerebral artery. MATERIALS AND METHODS: A-28-year-old man with traffic accident was examined with brain CT & cerebral angiography. RESULTS: l) Brain CT:lnitial scan shows multiple skull fractures involving right frontal bones with subarachnoid hemorrhage and pneumocephalus. Follow-up scan shows intracerebral hemorrhage at bilateral frontal lobes. 2) Cerebral angiography:A traumatic aneurysm which is slowly filling and delayed emptying is noted at the junctional portion of A1 and A2 segment of the anterior cerebral artery. CONCLUSION: This report demonstrates radiologic findings of traumatic aneurysm at anterior cerebral artery with the brief review of the literatures.
Accidents, Traffic
;
Aneurysm
;
Anterior Cerebral Artery
;
Brain
;
Cerebral Angiography
;
Cerebral Hemorrhage
;
Craniocerebral Trauma
;
Follow-Up Studies
;
Frontal Bone
;
Frontal Lobe
;
Intracranial Aneurysm*
;
Intracranial Hemorrhages
;
Pneumocephalus
;
Skull Fractures
;
Subarachnoid Hemorrhage
3.Replantation of 135 fingertip amputations.
Joon Hee LEE ; Jae Ho LIM ; Jong Moon LEE ; Woo Kyung KIM ; Chun Eun CHUNG
Journal of the Korean Society of Plastic and Reconstructive Surgeons 1993;20(5):1136-1144
No abstract available.
Amputation*
;
Replantation*
4.Clinical uses of scapular free flap.
Joon Hee LEE ; Seung Ha PARK ; Woo Kyung KIM ; Chun Eun CHUNG
Journal of the Korean Society of Plastic and Reconstructive Surgeons 1991;18(5):912-919
No abstract available.
Free Tissue Flaps*
5.Clinical uses of scapular free flap.
Joon Hee LEE ; Seung Ha PARK ; Woo Kyung KIM ; Chun Eun CHUNG
Journal of the Korean Society of Plastic and Reconstructive Surgeons 1991;18(5):912-919
No abstract available.
Free Tissue Flaps*
6.Risk Factors Influencing the Occurrence of Injuries in Koreans Requiring Hospitalization.
Kyung Won PAEK ; Ki Hong CHUN ; Joon Pil CHO
Yonsei Medical Journal 2007;48(2):164-170
PURPOSE: This study focused on local communities and the factors influencing injuries requiring hospital admission that affect the quality of life for Koreans. MATERIALS AND METHODS: This study used data collected from 4,400 households during the 2001 Korea National Health and Nutrition Examination Survey (KNHANES). A stratified multistage probability sampling method was applied and the final sample included 7,924 subjects over 20 years old who had completed the questionnaire regarding factors influencing injuries requiring hospital admission. Multiple logistic regression analysis was used to estimate the risk factors influencing injuries. RESULTS: The incidence of injuries requiring hospital admission in Koreans was higher in men than in women at 2.3% (95% CI: 1.8-2.8) and 1.7% (95% CI: 1.3-2.1), respectively. Statistically significant factors affecting the occurrence of injuries requiring hospital admission were marital status (OR: 2.60, 95% CI: 2.22- 5.56), state of health (OR: 0.63, 95% CI: 0.43-0.92), frequency of heavy drinking (OR: 1.96, 95% CI: 1.01-3.79), normal physical activities (OR: 1.68, 95% CI: 1.07-2.65), and sleep (OR: 1.54, 95% CI: 1.01-2.35). CONCLUSION: The results of this study can be used to develop measures to prevent fatal injuries and be used as basic data for community health programs.
7.A building database for emergency room and its use.
Joon Yang NOH ; Chang Soon JANG ; Seong Oung LEE ; Kyung Bin ROH ; Kee Chun HONG ; Doo Sun LEE
Journal of the Korean Society of Emergency Medicine 1993;4(1):53-66
No abstract available.
Emergencies*
;
Emergency Service, Hospital*
8.Analysis of Angiographic Findings and Clinical Impact of Anterior Clinoidectomy in Internal Carotid-Posterior Communicating Artery Aneurysm Surgery - Clinical Research -.
Kyung Cheul CHOI ; Tae Kyu LEE ; Joon Ki KANG ; Shin Soo JEUN ; Chun Kun PARK ; Moon Chan KIM
Korean Journal of Cerebrovascular Surgery 2005;7(1):18-23
OBJECTIVE: In the case of internal carotid-posterior communicating (ICPCom) artery aneurysm it is possible to successfully clip the aneurysmal neck without any difficulty. However, if the aneurysmal neck is wide, the aneurysmal sac is giant, the aneurysmal sac is hidden by the anterior clinoid process (ACP), or its dome is located in ventral portion or low-lying ICPCom aneurysm, it is difficult to open the proximal aneurysmal neck and we encounter a barrier in controlling bleeding in case of premature rupture of the aneurysm. They need to be resected the ACP for successful aneurysmal clipping. We propose angiographic criteria for predicting necessity of resection of the ACP before clipping of the ICPCom artery aneurysm. METHODS: Between 1999 and 2003, 16 patients with ICPCom artery aneurysm were treated with the resection of the ACP prior to applying the clip on the neck of the aneurysm. We retrospectively analyzed the preoperative cerebral angiographies, and the clinical and operative findings. We measured various radiometric parameters to reveal the angiographic characteristics. RESULTS: The mean value of the radiographic measurement in case of the cerebral angiography in 16 patients is as follows: angle A (the angle between the midline of the skull and the axis of the C1 segment on A-P view) ranged from 15 to 80 degrees (mean+/-SD, 42+/-5 degrees), angle B (the angle between the axes of the C1 and C2 segments on A-P view) ranged from 70 to 150 degrees (mean+/-SD, 110+/-15 degrees), and distance C (the distance between the tip of the ACP and the most proximal portion of the aneurysmal neck on the lateral view) ranged from 2 to 9 mm (mean+/-SD, 4.5+/-1 mm). CONCLUSION: We have resected the ACP in 16 of the 40 ICPCom aneurysms. The mean values of angle A, angle B, and distance C is 42+/-5 degrees, 110+/-15 degrees, and 4.5+/-1 mm, respectively. We did not encounter any difficulty in clipping in all the cases in which there was no premature rupture of the aneurysm. Most of cases had a good outcome.
Aneurysm*
;
Arteries*
;
Axis, Cervical Vertebra
;
Cerebral Angiography
;
Hemorrhage
;
Humans
;
Neck
;
Retrospective Studies
;
Rupture
;
Skull
9.A study on the change of urinary catecholamine sexcretion due to noise stress.
Hyung Suk KIM ; Joon Bae CHUN ; Ulf LUNDBERG
Korean Journal of Preventive Medicine 1993;26(4):565-573
Noise is not only affecting the ear and the auditory cortex locally, but its influence is widely spread throughout the brain structures, e. g., the reticular formation, the brain stem nuclei or the subcortical forebrain area. Hence, any of the organism's activities can be hindered or stimulated by noise. High noise is a stressor and the catecholamine level can be used both as a stress marker and as an indicator of modified sympathetic nervous system activity. Several recent studies have found that the urinary excretion of catecholamines is increased due to high noise intensity, especially unexpectedly high and long lasting noise. The present study was conducted in order to examine the effects of noise stress on urinary excretion of catecholamines in rats and humans. Rats were exposed to 90 dB noises for 10, 30, and 60 minutes, 3 and 12 hours. 24 hour urinary samples were collected and the catecholamines were extracted by alumina and analyzed by HPLC-ECD. Catecholamine levels increased with time of exposure up to 60 minutes: norepinephrine concentration at 60 min of noise=1.038 ng/ml, epinephrine=0.636 ng/ml. Urine catecholamines of blue collar workers exposed to 90 dB of noise at the workplace were collected between 2 and 4 p.m. and compared to that of white collar workers exposed to 70 dB. Mean norepinephrine level of the blue collar workers was 0.89 ng/ml(+/-0.25), epinephrine 0.24 ng/ml(+/-0.09), and that of the white collar workers 0.48 ng/ml(+/-0.12), epinephrine 0.19 ng/ml(+/-0.05). It was concluded that noise acts as a stressor and increases the catecholamine levels in both rats and humans.
Aluminum Oxide
;
Animals
;
Auditory Cortex
;
Brain
;
Brain Stem
;
Catecholamines
;
Ear
;
Epinephrine
;
Humans
;
Noise*
;
Norepinephrine
;
Prosencephalon
;
Rats
;
Reticular Formation
;
Sympathetic Nervous System
10.Supraclavicular Approach to a Lesion in the Cervico-Thoracic Junction.
Chun Kun PARK ; Kyung Suck CHO ; Joon Ki KANG ; Chang Rak CHOI
Journal of Korean Neurosurgical Society 1991;20(8):709-712
A lesion in the cervico-thoracic junction can be of interest to neurosugeons, not only because its incidence is quite low, but also because there is not a published proper anterior approach. Currently the authors have experienced two cases of degenerative disease and one case of traumatic dislocation of the cervico-thoracic junction, in which the main lesions were located in the interspace or posterior portion of vertebral bodies at the junction between the cervical and thoracic spines and an anterior approach to the lesions should be considered. A supraclavicular approach has applied to these cases, by which a good surgical field was obtained. Furthermore the surgical results were good without any serious complication.
Dislocations
;
Incidence
;
Spinal Fusion
;
Spine