1.Influence of fermented red ginseng extract in proliferation of rat glomerular mesangial cells and extracellular matrix degradation under high sugar stimulation
Meng QU ; Jiajing DONG ; Rui JIANG ; Jichun CUI ; Kunyang SUN ; Zhiheng DONG ; Liwei SUN
Journal of Jilin University(Medicine Edition) 2017;43(2):245-249
Objective:To explore the influence of fermented red ginseng extract (FRGE) in the proliferation of rat glomerular mesangial cells (GMCs) and the degradation of extracellular matrix(ECM)under high sugar stimulation, and to clarify the prevention and treatment effects of FRGE on diabetic nephropathy (DN) and the possible mechanism.Methods:The rat GMCs were cultured and divided into normal concentration of D-glucose (NG) group, high concentration of D-glucose (HG) group and high concentration of D-glucose plus different concentrations (3.75, 7.50, 15.00 mg·L-1) of FRGE groups. The proliferation rates of rat GMCs were detected with MTT,and the type Ⅳcollagen(Col Ⅳ) levels in supernatants of the GMCs were detected by ELISA. The protein expressions levels of matrix metalloproteinase-2(MMP-2) and tissue inhibitor of metalloproteinase-2 (TIMP-2) were detected with Western blotting m ethod.Results:Compared with NG group, the proliferation rate of GMCs in HG group was increased(P<0.01), the Col Ⅳ level was increased(P<0.01),the MMP-2 expression level was decreased, and the TIMP-2 expression level was up-regulated(P<0.01).Compared with HG group, the proliferation rates of GMCs in various FRGE groups were decreased(P<0.01), the Col Ⅳ levels were decreased(P<0.01),the expression levels of TIMP-2 were reduced(P<0.01),and the expression levels of MMP-2 were increased(P<0.01).Conclusion:FRGE can inhibit the proliferation of rat GMCs induced by high sugar and promote the ECM degradation to delay the occurrence and development of DN.
2.Clinical study on expression and methylation of SOX17 gene in chronic myeloid leukemia
Chunyan TANG ; Cui AN ; Dongming YAO ; Qing LIU ; Hong GUO ; Xiangmei WEN ; Jiang LIN ; Jichun MA ; Ming ZHANG ; Gaofei XIAO ; Lei YANG ; Jun QIAN
The Journal of Practical Medicine 2014;(19):3070-3072
Objective To investigate the expression level and promoter methylation of SOX17 gene and the clinical correlations in Chinese patients with chronic myeloid leukemia ( CML ) . Methods The levels of SOX17 expression and methylation were detected by RQ-PCR and RQ-MSP. Results SOX17 expression level was significantly lower in CML compared with 30 controls (P=0.001). The area under the receiver operating characteristic (ROC) curve (AUC) was 0.748 to differentiate CML from control (P=0.001). There was a trend of correlation between SOX17 expression and bcr/abl transcript (r = 0.439,P = 0.068) in CML patients. Hypermethylation of SOX17 promoter was detected in 3 (4%) CML patients, however, there was no difference as compared with 32 controls. In our study, SOX17 hypermethylation was not corrected with its expression. Conclusion Decreased SOX17 expression is a common molecular event in CML and may be considered as an available biomarker to diagnose CML. Dysregulated SOX17 is not caused by promoter hypermethylation in CML.
3.Identification of corium stomachium galli by molecular taxonomy.
Meng QU ; Jichun CUI ; Zhiheng DONG ; Lihua ZHANG ; Bingmei WANG ; Jilin ZHANG ; Cai LI
China Journal of Chinese Materia Medica 2009;34(24):3192-3194
OBJECTIVETo establish a convenient and accurate method of DNA molecular marker for the identification of corium stomachium galli.
METHODCytb mtDNA sequences of Gallus gallus domestica and three other species of poultry were downloaded from Genbank. Species-specific PCR primers were designed according to the differential DNA fragments of the cytb genes. PCR tests were performed with the DNAs extracted from G. gallus domestica, three other poultry species and domestic mammal animals.
RESULTThe specific primers of G. gallus domestica could only amplify the cytb mtDNA of G. gallus domestica.
CONCLUSIONThe primers are specific to G. gallus domestica mtDNA and can used to discern Corium stomachium from the false medicine.
Animals ; Chickens ; classification ; genetics ; DNA, Mitochondrial ; genetics ; Liver ; metabolism ; Polymerase Chain Reaction
4.Identification and Analysis of Human Sex-biased MicroRNAs.
Chunmei CUI ; Weili YANG ; Jiangcheng SHI ; Yong ZHOU ; Jichun YANG ; Qinghua CUI ; Yuan ZHOU
Genomics, Proteomics & Bioinformatics 2018;16(3):200-211
Sex differences are widely observed under various circumstances ranging from physiological processes to therapeutic responses, and a myriad of sex-biased genes have been identified. In recent years, transcriptomic datasets of microRNAs (miRNAs), an important class of non-coding RNAs, become increasingly accessible. However, comprehensive analysis of sex difference in miRNA expression has not been performed. Here, we identified the differentially-expressed miRNAs between males and females by examining the transcriptomic datasets available in public databases and conducted a systemic analysis of their biological characteristics. Consequently, we identified 73 female-biased miRNAs (FmiRs) and 163 male-biased miRNAs (MmiRs) across four tissues including brain, colorectal mucosa, peripheral blood, and cord blood. Our results suggest that compared to FmiRs, MmiRs tend to be clustered in the human genome and exhibit higher evolutionary rate, higher expression tissue specificity, and lower disease spectrum width. In addition, functional enrichment analysis of miRNAs show that FmiR genes are significantly associated with metabolism process and cell cycle process, whereas MmiR genes tend to be enriched for functions like histone modification and circadian rhythm. In all, the identification and analysis of sex-biased miRNAs together could provide new insights into the biological differences between females and males and facilitate the exploration of sex-biased disease susceptibility and therapy.
Biological Evolution
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Female
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Genome, Human
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Humans
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Male
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MicroRNAs
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blood
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genetics
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Organ Specificity
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Sex Characteristics
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Transcriptome