1.MELD score in the prediction of perioperative risks in patients who underwent partial hepatectomy for hepatocellular carcinoma
Ying ZHU ; Jian DONG ; Wanli WANG ; Bo WANG ; Yi LYU
Chinese Journal of Hepatobiliary Surgery 2014;20(3):165-169
Objective To determine the perioperative risks of partial hepatectomy by determining the preoperative liver functional reserve in patients with hepatocellular carcinoma (HCC),and to compare the model for end-stage liver disease (MELD) score with the Child-Pugh classification in predicting prognosis.Methods We reviewed the clinical data of 202 patients with HCC who underwent partial hepatectomy.The MELD score and the Child-Pugh classification were determined preoperatively.Results The incidence of postoperative liver dysfunction happened in 44.0% of Child A patients,50% in Child B patients,41.6%in patients with a MELD score below 14,and 91.7% in patients with a MELD score of > 14.The difference between the rates of postoperative liver dysfunction in patients with a preoperative MELD score above 14 and below 14 was significant (P < 0.05),while that between patients with Child-Pugh A and B was insignificant (P > 0.05).The incidences of postoperative liver dysfunction in patient with a MELD < 8,8 ≤ MELD ≤ 14,MELD > 14 were 38.2%,57.6% and 91.7%,respectively,indicating that there was a positive co-relationship between the MELD score and the incidences of liver dysfunction.The Spearman rank correlation test showed the MELD score was significant correlated with the Child-Pugh score (r =0.404 ; P < 0.05).The areas under the ROC curves of the MELD score and the Child-Pugh score were 0.703 and 0.587 (P < 0.05).Conclusions The MELD score predicted postoperative liver dysfunction more accurately than the Child-Pugh classification.HCC patients undergoing partial hepatectomy with a preoperative MELD score > 14 had a high perioperative risk.To ensure the safety of partial hepatectomy,HCC patients with a preoperative MELD score > 14 requires active preoperative preparation,bringing the score near to or less than 14.
2.Identification of a GNB1 gene variant in a child with autosomal dominant mental retardation 42.
Ying REN ; Yuqiang LYU ; Jian MA ; Dong WANG ; Guangye ZHANG ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2021;38(6):565-568
OBJECTIVE:
To explore the genetic basis for a child featuring global developmental delay.
METHODS:
DNA was extracted from peripheral blood sample taken from the patient and subjected to whole exome sequencing. Suspected variants were verified by Sanger sequencing of his family members.
RESULTS:
A heterozygous c.239T>C (p.Ile80Thr) variant of the GNB1 gene was detected in the proband, which was a verified to be de novo in origin.
CONCLUSION
The heterozygous c.239T>C (p.Ile80Thr) variant of the GNB1 gene probably underlay the disease in this child.
Arthrogryposis
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Child
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Family
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GTP-Binding Protein beta Subunits
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Heterozygote
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Humans
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Intellectual Disability/genetics*
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Whole Exome Sequencing
3.Clinical and genetic analysis of a patient with rare nephronophthisis.
Dong WANG ; Guixia TONG ; Rui DONG ; Yuqiang LYU ; Min GAO ; Jian MA ; Ya WAN ; Huanping PANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(7):743-746
OBJECTIVE:
To explore the genetic basis for a child with clinically suspected nephronophthisis (NPHP).
METHODS:
Peripheral blood samples of the patient and her parents were collected subjected to high-throughput sequencing. Sanger sequencing was used to verify the gene variants.
RESULTS:
The patient, a 7-year-old girl with congenital blindness, was admitted to a local hospital due to repeated vomiting for 7-8 days and then transferred to author's hospital due to renal failure. Her urine occult bloods (3+) and urine protein (1+) were abnormal. Her blood urea nitrogen and creatinine showed a significant progressive increase. Renal ultrasound showed a mild enlargement in bilateral renal, increased echogenicity, loss of corticomedullary differentiation, and the presence of cysts in both kidneys. No familial genetic history was found in the family of patient and the child was clinically diagnosed with nephronophthisis. The proband was found to harbor compound heterozygous variants of the CEP290 gene, namely c.2587-2A>T and c.2251C>T, which were inherited from her mother and father, respectively. Based on the ACMG guidelines, both variants were predicted to be pathogenic.
CONCLUSION
The patient was diagnosed with NPHP type 6 due to variants of the CEP290 gene. Above finding has provided new evidence for the genotype-phenotype correlation of this disease.
4.Analysis of clinical and genetic characteristics of a child with ring chromosome 4 syndrome.
Yuqiang LYU ; Fengling SONG ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Ya WAN ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2020;37(8):843-846
OBJECTIVE:
To explore the genetic basis for a child featuring short stature.
METHODS:
G-banded karyotyping, chromosomal microarray analysis (CMA) and high-throughput sequencing were carried out on peripheral blood sample from the child.
RESULTS:
The karyotype of the child was ascertained as 45,XY,-4[3]/46,XY,r(4)(p16q35)[84]/47,XY,-4,r(4)(p16q25)*2[7]/48,XY,-4,r(4)(p16q35)*3[1]/46,XY,dic r(4;4)(p16q35;p16q35)[2]/46,XY,add(4)(p16)[3]. A 647 kb deletion at 4p16.3 was identified by CMA, which encompassed 6 OMIM genes including ZNF141, PIGG, PDE6B, ATP5I, PCGF3 and MYL5. High-throughput sequencing has identified no pathogenic/likely pathogenic variants consistent with the clinical symptoms.
CONCLUSION
A rare ring chromosome 4 syndrome was identified by combined chromosomal karyotyping, CMA and high-throughput sequencing. Conventional cytogenetic analysis and genetic testing in combine have enabled the diagnosis in this case.
5.Variant analysis of CCBE1 gene in a case of Hennekam lymphangiectasia-lymphedema syndrome type 1.
Ying REN ; Yi LIU ; Yuqiang LYU ; Min GAO ; Dong WANG ; Ya WAN ; Jian MA ; Nan SHEN ; Zhongtao GAI
Chinese Journal of Medical Genetics 2020;37(6):669-672
OBJECTIVE:
To explore the genetic etiology of a child with lymphangiectasia and lymphedema.
METHODS:
DNA sample of the patient was extracted and subjected to whole exome sequencing. Suspected variants were verified by Sanger sequencing.
RESULTS:
The patient was found to carry compound heterozygote variants (c.521G>A and c.472C>T) of the CCBE1 gene, which were respectively inherited from his parents.
CONCLUSION
The compound heterozygote variants of the CCBE1 gene probably underlie the disease in this child.
6.A case with autosomal dominant mental retardation type 5 due to de novo SYNGAP1 variant.
Zaifen GAO ; Yuqiang LYU ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(6):661-664
OBJECTIVE:
To investigate the clinical and genetic features of a Chinese girl featuring mental retardation, intellectual disability, language development delay and epilepsy.
METHODS:
G-banded chromosomal karyotyping was carried out for the child. Genomic DNA of the patient and her parents was extracted and subjected to high-throughput sequencing. The results were analyzed with bioinformatic tools and validated by Sanger sequencing.
RESULTS:
The karyotype of the child was ascertained as 46,XX. Sequencing result showed that she has carried a de novo heterozygous c.1861C>T (p.R621X) variant of the SYNGAP1 gene.
CONCLUSION
The nonsense variant c.1861C>T (p.R621X) of the SYNGAP1 gene probably underlies the disease in this child. Above result has enabled genetic diagnosis and counseling for her family.
7.Analysis of a case with Mowat-Wilson syndrome caused by ZEB2 gene variant.
Jian MA ; Yong LIU ; Kaihui ZHANG ; Yuqiang LYU ; Min GAO ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(5):539-542
OBJECTIVE:
To explore the genetic basis of a proband with distinctive facial features, global developmental delay, seizures and hypoplasia of corpus callosum through next generation sequencing (NGS).
METHODS:
Genomic DNA was extracted from peripheral blood samples of the proband and his family members. Whole exome and flanking sequences were screened by NGS. Suspected variants were verified by Sanger sequencing.
RESULTS:
The proband was found to carry a heterozygous c.2824G>T (p.G942X) variant of the ZEB2 gene, which was verified by Sanger sequencing to be a de novo variant.
CONCLUSION
The heterozygous c.2824G>T (p.G942X) variant of the ZEB2 gene probably underlies the Mowat-Wilson syndrome in the proband.
Facies
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Genetic Variation
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Heterozygote
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Hirschsprung Disease
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genetics
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Humans
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Intellectual Disability
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genetics
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Microcephaly
;
genetics
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Whole Exome Sequencing
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Zinc Finger E-box Binding Homeobox 2
;
genetics
8.Diagnosis of Bainbridge-Ropers syndrome due to de novo ASXL3 variant by high throughput sequencing.
Yuqiang LYU ; Dongmei ZHAO ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(4):452-454
OBJECTIVE:
To explore the clinical and genetic features of a patient with mental retardation.
METHODS:
G-Banding chromosomal karyotyping and high-throughput sequencing was carried out for the child. Suspected variant was validated in his family by Sanger sequencing and bioinformatic analysis.
RESULTS:
The patient was found to carry a de novo heterozygous c.4090G>T (p.Gly1364X) variant of the ASXL3 gene, which was known to predispose to Bainbridge-Ropers syndrome.
CONCLUSION
The nonsense c.4090G>T (p.Gly1364X) variant probably accounts for the disease in this patient.
Child
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Codon, Nonsense
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Developmental Disabilities
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genetics
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High-Throughput Nucleotide Sequencing
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Humans
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Intellectual Disability
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genetics
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Phenotype
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Syndrome
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Transcription Factors
;
genetics
9.Clinical and genetic analysis of a patient with Angelman syndrome due to a frameshift variant of UBE3A gene.
Zaifen GAO ; Yuqiang LYU ; Kaihui ZHANG ; Min GAO ; Jian MA ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(10):1120-1123
OBJECTIVE:
To explore the genetic basis for a Chinese boy featuring developmental delay and epilepsy.
METHODS:
Clinical data of the patient was collected. Genomic DNA of the patient and his parents was extracted and subjected to high-throughput sequencing. Pathogenicity of the variant was predicted and validated.
RESULTS:
Sequencing results showed that the patient has carried a de novo c.1470delA (p.V491Ffs*6) variant of the UBE3A gene, which was predicted to be pathogenic.
CONCLUSION
The frameshift variant c.1470delA (p.V491Ffs*6) probably underlay the disorders in this child.
10.Genetic analysis of a case with Pitt-Hopkins syndrome due to variant of TCF4 gene.
Jian MA ; Huawei ZHANG ; Kaihui ZHANG ; Yuqiang LYU ; Min GAO ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2020;37(11):1253-1256
OBJECTIVE:
To explore the genetic basis of a patient presenting with dysmorphism, intellectual disability, psychomotor delay and hypoplasia of corpus callosum by using next generation sequencing.
METHODS:
Genomic DNA was extracted from peripheral blood samples of the patient and his family members and subjected to exome sequencing. Suspected variants were verified with Sanger sequencing.
RESULTS:
The patient was found to carry a heterozygous c.1357delAinsGGA variant in exon 11 of the TCF4 gene, which was verified as de novo by Sanger sequencing. The variant may result in a truncated protein and affect its function.
CONCLUSION
The heterozygous c.1357delAinsGGA variant the TCF4 gene probably underlies the disease in the proband.
Facies
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Genetic Testing
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Humans
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Hyperventilation/genetics*
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Intellectual Disability/genetics*
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Male
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Transcription Factor 4/genetics*