1.Serological Characteristics and Molecular Biological Mechanism of AEL.02 Subtype.
Feng-Wu QIU ; Xiao-Ling SHI ; Mei-Hua LI ; Gang SHEN
Journal of Experimental Hematology 2022;30(5):1562-1566
OBJECTIVE:
To explore the serological characteristics and molecular biological mechanism of an ael subtype specimen.
METHODS:
The ABO blood typing was identified by routine blood group serological and absorption/elution methods; PCR-SBT method for ABO genotyping: 7 exons of ABO gene were amplified by PCR, the amplified products were purified, and then sequencing primers were designed and the amplified products were sequenced directly for analysis; 3D molecular model was constructed and the difference of free energy (ΔΔG) was used to predict the GTA mutant stability.
RESULTS:
A antigen was not detected on erythrocytes through absorption and elution tests, which was not consistent with the serological characteristics of ael, and the serological typing results were ambiguous. The ABO genotype was ABO*AEL.02/O.01.01, and there were two mutations in exon 7 of the gene, c.467C>T and c.646T>A, which could lead to the replacement of proline with leucine at position 156 (p.Pro156Leu) and phenylalanine with isoleucine at position 216 on the GTA, respectively. The 3D model predicts that the mutations do not introduce new hydrogen bonds to the GTA mutant and do not form a new secondary structure, but can lead to an increase in the ΔΔG value of the GTA mutant, suggesting a decrease in protein stability.
CONCLUSION
The serological characteristics alone is not reliable to determine the ael subype; the ael phenotype may be due to the GTA mutant that reduces enzyme stability.
ABO Blood-Group System/genetics*
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Alleles
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Genotype
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Isoleucine/genetics*
;
Leucine/genetics*
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Phenotype
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Phenylalanine/genetics*
;
Proline/genetics*
2.Preparation and identification of soluble trimeric CD40-isoleucine zipper fusion protein.
Li-Hui XU ; Yi LIU ; Xian-Hui HE
Chinese Journal of Biotechnology 2006;22(3):477-482
The interaction of CD40 with its cognate ligand, CD40L (CD154), plays important roles in immune responses. Blockade of CD40-CD40L signal pathway can protect the progression of antibody- and cell-mediated autoimmune diseases, and reduce allograft rejection thus prolonging graft survival, even engendering long-lived antigen-specific tolerance. The present study aims to enhance the binding activity of CD40 by incorporating an isoleucine zipper (IZ) trimeric motif into CD40 ectodomain to promote the formation of soluble CD40 trimers, which would be useful for blocking CD40-CD40L interaction. A prokaryotic expression vector for soluble human CD40 ectodomain fused with an IZ motif and a hexa-histidine (His6) tag at its carboxyl terminus (sCD40IZ) was constructed by multiple round PCR using cloned CD40 cDNA as a template. The recombinant sCD40IZ protein was expressed highly in Escherichia coli (E. coli) with a molecular weight of 27kD, which is consistent with its theoretical value. It mainly existed in inclusion bodies. After refolding from inclusion bodies, soluble sCD40IZ protein was purified by gel filtration. Its molecular weight in solution was about 91kD when determined by gel filtration, suggesting that it most probably existed in the form of trimers. Moreover, this protein could bind to CD40L expressed on Jurkat T cells and its binding activity was significantly higher than that of soluble CD40 without an IZ motif. These results suggest that incorporation of an IZ motif at the carboxyl terminus of soluble CD40 can facilitate the formation of trimers and enhance its binding activity with CD40L. Thus, the trimeric CD40 protein may be used to block CD40-CD40L signal pathway, suggesting that it may have potential application in preventing autoimmune diseases and transplantation rejection.
CD40 Antigens
;
biosynthesis
;
genetics
;
metabolism
;
CD40 Ligand
;
metabolism
;
Escherichia coli
;
genetics
;
metabolism
;
Humans
;
Isoleucine
;
biosynthesis
;
genetics
;
Leucine Zippers
;
genetics
;
Protein Multimerization
;
Recombinant Fusion Proteins
;
biosynthesis
;
genetics
;
metabolism
3.Expression of isoleucine zipper modified soluble CD40L in Pichia pastoris.
Xiaobo DU ; Ling TIAN ; Yongsheng WANG ; Peng DIAO ; Guoqing WANG ; Yuquan WEI
Journal of Biomedical Engineering 2006;23(4):844-847
To obtain the expression of Isoleucine Zipper modified soluble CD40L (IZ-sCD40L) in Pichia pastoris, firstly, DNA fragment of IZ-sCD40L was obtained by PCR and over-lap PCR . Then the expression vector pPICZaA-IZ-sCD40L was constructed. Nucleotide sequencing analysis indicated that the DNA fragment of IZ-sCD40L was correctly inserted into the pPICZaA vector. Linearized pPICZ(alpha)A-IZ-sCD40L was introduced into Pichia pastoris GS115. Positive clone was selected by PCR and its phenotype was determined. The positive clone was introduced with methanol. The results of SDS-PAGE and Western blot showed that product was recombinant Isoleucine Zipper modified soluble CD40L fusion protein.
Angiotensin II
;
CD40 Ligand
;
biosynthesis
;
genetics
;
Cloning, Molecular
;
Isoleucine
;
analogs & derivatives
;
biosynthesis
;
genetics
;
Pichia
;
genetics
;
metabolism
;
Plasmids
;
Polymerase Chain Reaction
;
methods
;
Recombinant Fusion Proteins
;
biosynthesis
;
genetics
;
Recombination, Genetic
4.Overexpression of Corynebacterium glutamicum NAD kinase improves L-isoleucine biosynthesis.
Xiaojing HUAN ; Kun LI ; Feng SHI ; Xiaoyuan WANG
Chinese Journal of Biotechnology 2012;28(9):1038-1047
NAD kinase catalyzes the phosphorylation of coenzyme I [NAD(H)] to form coenzyme II [NADP(H)], and NADPH is an important cofactor in L-isoleucine biosynthesis. In order to improve NADPH supply, ppnK, the gene encoding NAD kinase in Corynebacterium glutamicum was cloned and separately expressed in an L-isoleucine synthetic strain, Brevibacterium lactofermentum JHI3-156, by an inducible expression vector pDXW-8 and a constitutive expression vector pDXW-9. Compared with the control strain JHI3-156/pDXW-8, NAD kinase activity of the inducible ppnK-expressing strain JHI3-156/pDXW-8-ppnK was increased by 83.5%. NADP(H)/NAD(H) ratio was also increased by 63.8%. L-isoleucine biosynthesis was improved by 82.9%. Compared with the control strain JHI3-156/pDXW-9, NAD kinase activity of the constitutive ppnK-expressing strain JHI3-156/pDXW-9-ppnK was increased by 220%. NADP(H)/ NAD(H) ratio and NADPH concentration were increased by 134% and 21.7%, respectively. L-isoleucine biosynthesis was increased by 41.7%. These results demonstrate that NAD kinase can improve the coenzyme II supply and L-isoleucine biosynthesis, which would also be useful for biosynthesis of other amino acids.
Brevibacterium
;
genetics
;
metabolism
;
Cloning, Molecular
;
Corynebacterium glutamicum
;
enzymology
;
Isoleucine
;
biosynthesis
;
Metabolic Engineering
;
NAD
;
metabolism
;
NADP
;
metabolism
;
Phosphotransferases (Alcohol Group Acceptor)
;
genetics
;
metabolism
;
Recombinant Proteins
;
genetics
;
metabolism
5.Molecular Analysis of Isoleucyl-tRNA Synthetase Mutations in Clinical Isolates of Methicillin-Resistant Staphylococcus aureus with Low-Level Mupirocin Resistance.
Jin Ah YANG ; Dae Won PARK ; Jang Wook SOHN ; In Seok YANG ; Kyung Hyun KIM ; Min Ja KIM
Journal of Korean Medical Science 2006;21(5):827-832
Emergence and spread of low-level mupirocin resistance in staphylococci have been increasingly reported in recent years. The aim of this study was to characterize missense mutations within the chromosomal isoleucyl-tRNA synthetase gene (ileS) among clinical isolates of methicillin-resistant Staphylococcus aureus (MRSA) with low-level mupirocin resistance. A total of 20 isolates of MRSA with low-level mupirocin resistance (minimal inhibitory concentration, 16-64 microgram/mL) were collected from 79 patients in intensive care units for six months. The isolates were analyzed for isoleucyl-tRNA synthetase (IleS) mutations that might affect the binding of mupirocin to the three-dimensional structure of the S. aureus IleS enzyme. All isolates with low-level mupirocin resistance contained the known V588F mutation affecting the Rossman fold, and some of them additionally had previously unidentified mutations such as P187F, K226T, F227L, Q612H, or V767D. Interestingly, Q612H was a novel mutation that was involved in stabilizing the conformation of the catalytic loop containing the KMSKS motif. In conclusion, this study confirms that molecular heterogeneity in ileS gene is common among clinical MRSA isolates with low-level mupirocin resistance, and further study on clinical mutants is needed to understand the structural basis of low-level mupirocin resistance.
Staphylococcus aureus/drug effects/*genetics
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*Mutation, Missense
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Mupirocin/*pharmacology
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Methicillin Resistance
;
Isoleucine-tRNA Ligase/*genetics
;
Intensive Care Units
;
Humans
;
Electrophoresis, Gel, Pulsed-Field
;
Drug Resistance, Bacterial