1.Zebrafish's Circular RNAs.
Acta Academiae Medicinae Sinicae 2022;44(4):693-698
Circular RNAs (circRNAs),a group of highly conserved small RNAs,are characterized by a closed circular structure from precursor linear RNA through reverse splicing.They are powerful regulators of the physiological and pathological processes in organisms at different development stages.Zebrafish can be used for the high-throughput drug screening with low cost.Thus,the circRNAs associated with development and inflammation can be mined from zebrafish.Recently,a variety of circRNAs in zebrafish have been identified and characterized.Studies have proved that circRNAs play a vital role in the development and inflammation of zebrafish.The paper summarizes the classification,characteristics,and biological functions of circRNAs,and reviews the research progress in zebrafish's circRNAs.
Animals
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Inflammation
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RNA/genetics*
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RNA, Circular
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Zebrafish/genetics*
2.Research progress in effects of microRNA -15a and microRNA -16 on fibrotic diseases.
Journal of Central South University(Medical Sciences) 2023;48(5):743-749
MicroRNA (miR) is a class of highly conserved non-coding single-stranded RNA widely existing in mammals, which can negatively regulate the expression of targeting genes after transcription. As a key regulator, miR negatively regulates the expression of the targeting genes and disrupts important molecular signaling pathways, leading to the imbalance of multiple pathways such as tissue repair and inflammation involved in the fibrotic process. Among them, miR-15a/16 can participate in regulating and controlling the fibrotic process of various organs, including liver, lung, heart, kidney and other fibrotic diseases by acting on cell proliferation and transformation, extracellular matrix proteins production and degradation, inflammation and other important cell functions. It has potential diagnostic and therapeutic value. Clarifying the biological function of miR-15a/16 and its mechanism for action and therapeutic application prospects in various fibrotic lesions are of great significance for the molecular targeted treatment of fibrotic diseases.
Humans
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Fibrosis/genetics*
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MicroRNAs/genetics*
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Signal Transduction
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Inflammation
3.MicroRNAs and nonresolving inflammation-related cancer.
Zhaojian GONG ; Shanshan ZHANG ; Ke TANG ; Xiayu LI ; Bo XIANG ; Juanjuan XIANG ; Ming ZHOU ; Jian MA ; Zhaoyang ZENG ; Wei XIONG ; Guiyuan LI
Journal of Central South University(Medical Sciences) 2013;38(6):639-644
The link between nonresolving inflammation and cancer is well documented. On the one hand, epidemiologic evidence supports that approximately 25% of all human cancer worldwide is caused by nonresolving inflammation. On the other hand, inflammatory cells are found in the microenvironment of most, if not all, tumors. In the tumor micro-environment, inflammatory cells and molecules influence almost every aspect of cancer. MicroRNAs (miRNAs) participate in the initiation and progression of nonresolving inflammation-related cancer by regulating the key genes and related signaling pathways. Further investigation into the molecular mechanisms by which miRNAs carry out their functions will be of great value in the prevention, early diagnosis, and treatment of tumors.
Chronic Disease
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Humans
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Inflammation
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complications
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genetics
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immunology
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Inflammation Mediators
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immunology
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MicroRNAs
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genetics
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Neoplasms
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etiology
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genetics
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Tumor Microenvironment
4.APOE-mediated suppression of the lncRNA MEG3 protects human cardiovascular cells from chronic inflammation.
Hongkai ZHAO ; Kuan YANG ; Yiyuan ZHANG ; Hongyu LI ; Qianzhao JI ; Zeming WU ; Shuai MA ; Si WANG ; Moshi SONG ; Guang-Hui LIU ; Qiang LIU ; Weiqi ZHANG ; Jing QU
Protein & Cell 2023;14(12):908-913
5.Gene expression profile related to inflammation in rat model of traumatic deep vein thrombosis.
Chun-qiang ZHANG ; He HUANG ; Zhi ZHAO ; Xi-zhang TANG ; Bing WANG ; Fei HE ; Xue-ling ZHAO ; Shi-he LI
Chinese Journal of Traumatology 2007;10(4):206-212
OBJECTIVETo study the relationship between inflammation and traumatic deep vein thrombosis (TDVT).
METHODSA rat model of deep venous thrombosis was established by directly clamping femoral vein. Based on the different biological situations of femoral vein thrombosis and observation phases, 150 SD rats were divided into 7 groups. Inflammatory cells in vein wall of each group were counted. The fold change and cluster analysis were applied to study the change of gene expression during the development of venous thrombosis. Especially, the genes related to inflammation, fibrinolysis, coagulation of endothelium were analyzed in detail.
RESULTSThe inflammation cells in femoral vein wall were mostly neutrophilic granulocytes in Groups B, C and D, while they were lymphocytes in Groups E, F and G. Compared with Groups A, B, E and G, the inflammation cell counts in Groups C, D and F were much higher (P less than 0.05). The results of fold-change analysis showed that 2 504 genes (Log 2 ratio > or = 1 or < or = 1) presented different expressions in the process of TDVT. Most of these genes'functions were not clarified so far and the genes with known functions were involved in inflammation, DNA-dependent transcription regulation, blood coagulation, fibrinolysis, etc. Among them, 23 genes related to inflammation had different expressions during TDVT. The cluster analysis showed that the expression changes of several genes, such as IL-1 alpha, IL-1 beta, IL-6, Cinc2, corresponded with the development of femoral vein thrombosis.
CONCLUSIONThere is a close relationship between the genes related to inflammation and deep vein thrombosis induced by direct vascular trauma.
Animals ; Gene Expression ; Inflammation ; genetics ; Rats ; Rats, Sprague-Dawley ; Venous Thrombosis ; genetics ; pathology
6.Anti-inflammatory: effect mechanism of warming-dredging in moxibustion.
Jin-Feng JIANG ; Ling-Ling WANG ; Xu BIN ; Hu LING ; Xiao-Ge SONG ; Huan-Gan WU
Chinese Acupuncture & Moxibustion 2013;33(9):860-864
The universality of anti-inflammation in moxibustion is analyzed in this article from its adaptation disease and ancient documentary records. The specificity of anti-inflammation in moxibustion is pointed out from its disease series research and scientific fact that moxibustion could be used for heat syndrome. The integrity of anti-inflammation in moxibustion is explained by series research result that four basic circulations of moxibustion for chronic inflammation are all effective. The two-way characteristic of moxibustion anti-inflammation is explained from the fact that moxibustion has regulation function both for excess and insufficiency of inflammation to demonstrate the effect mechanism of warming-dredging in moxibustion lies in its anti-inflammation. At last, the relevant possible mechanism between moxibustion anti-inflammation and transient receptor potential vanilloid (TRPV) is proposed. The effect mechanism of warming-dredging in moxibustion lies in anti-inflammation, which could provide theoretic basis for prevention and treatment of moxibustion for serious diseases.
Animals
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Humans
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Inflammation
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genetics
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immunology
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therapy
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Moxibustion
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instrumentation
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methods
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TRPV Cation Channels
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genetics
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immunology
7.Non-coding RNAs in viral myocarditis.
Jie HU ; Yangyang ZHU ; Qiong YUAN ; Dan YAN ; Chaozhi LI ; Hengzhong GUO ; Lili LU
Chinese Journal of Biotechnology 2021;37(9):3101-3107
Viral myocarditis (VMC) is a disease characterized by inflammation of myocardial cells caused by viral infection. Since the pathogenesis mechanism of VMC has not been fully elucidated, the diagnosis and treatment of this disease remains extremely challenging. Non-coding RNAs (ncRNAs) are a class of RNAs that do not encode proteins. An increasing number of studies have shown that ncRNAs are involved in regulating the occurrence and development of VMC, thus providing potential new targets for the treatment and diagnosis of VMC. This review summarizes the possible roles of ncRNAs in the pathogenesis and diagnosis of VMC revealed recently.
Coxsackievirus Infections
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Enterovirus B, Human
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Humans
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Inflammation
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Myocarditis/genetics*
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Virus Diseases/genetics*
8.Role and mechanism of circular RNA in brain injury induced by inflammation in preterm mice: a preliminary study.
Si-Meng WEI ; Mi XIAO ; Xi ZHENG ; Li LIU
Chinese Journal of Contemporary Pediatrics 2021;23(7):730-734
OBJECTIVE:
To determine the association of circular RNA (circRNA) and circRNA-microRNA (miRNA) network regulation with brain injury induced by inflammation in preterm mice.
METHODS:
Pregnant mice were treated with intraperitoneally injected lipopolysaccharide to establish a preterm mouse model of brain injury induced by inflammation (inflammation preterm group with 3 mice). Preterm mice born to normal pregnant mice by cesarean section were selected as controls (non-inflammation preterm group with 3 mice). The gene microarray technique was used to screen out the circRNAs associated with brain injury in preterm mice. The miRNA target prediction software was used to predict the binding sites between circRNAs and miRNAs and analyze the regulatory mechanism.
RESULTS:
A total of 365 differentially expressed circRNAs were screened out between the inflammation preterm and non-inflammation preterm groups (fold change > 1.5,
CONCLUSIONS
Inflammation induces a significant change in the expression profile of circRNAs in the brain tissue of mice, and the change in the expression of circRNAs plays an important role in brain injury induced by inflammation and subsequent brain development in preterm mice.
Animals
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Brain Injuries
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Cesarean Section
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Female
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Gene Expression Profiling
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Inflammation/genetics*
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Mice
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MicroRNAs/genetics*
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Pregnancy
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RNA/genetics*
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RNA, Circular
9.Tripterygium wilfordii multiglycoside-induced hepatotoxicity via inflammation and apoptosis in zebrafish.
Xiu-Ying DUAN ; Rui-Jiao MA ; Chung-Der HSIAO ; Zhen-Zhou JIANG ; Lu-Yong ZHANG ; Yun ZHANG ; Ke-Chun LIU
Chinese Journal of Natural Medicines (English Ed.) 2021;19(10):750-757
Tripterygium wilfordii multiglycoside (GTW) is a commonly used compound for the treatment of rheumatoid arthritis (RA) and immune diseases in clinical practice. However, it can induce liver injury and the mechanism of hepatotoxicity is still not clear. This study was designed to investigate GTW-induced hepatotoxicity in zebrafish larvae and explore the mechanism involved. The 72 hpf (hours post fertilization) zebrafish larvae were administered with different concentrations of GTW for three days and their mortality, malformation rate, morphological changes in the liver, transaminase levels, and histopathological changes in the liver of zebrafish larvae were detected. The reverse transcription-polymerase chain reaction (RT-PCR) was used to examine the levels of microRNA-122 (miR-122) and genes related to inflammation, apoptosis, cell proliferation and liver function. The results showed that GTW increased the mortality of zebrafish larvae, while significant malformations and liver damage occurred. The main manifestations were elevated levels of alanine aminotransferase (ALT) and aspartate aminotransferase (AST), significant liver atrophy, vacuoles in liver tissue, sparse cytoplasm, and unclear hepatocyte contours. RT-PCR results showed that the expression of miR-122 significantly decreased by GTW; the mRNA levels of inflammation-related genes il1β, il6, tnfα, il10, cox2 and ptges significantly increased; the mRNA level of tgfβ significantly decreased; the mRNA levels of apoptosis-related genes, caspase-8 and caspase-9, significantly increased; the mRNA level of bcl2 significantly decreased; the mRNA levels of cell proliferation-related genes, top2α and uhrf1, significantly reduced; the mRNA levels of liver function-related genes, alr and cyp3c1, significantly increased; and the mRNA level of cyp3a65 significantly decreased. In zebrafish, GTW can cause increased inflammation, enhanced apoptosis, decreased cell proliferation, and abnormal expression of liver function-related genes, leading to abnormal liver structure and function and resulting in hepatotoxicity.
Animals
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Apoptosis
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Chemical and Drug Induced Liver Injury/genetics*
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Inflammation/genetics*
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Trans-Activators
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Tripterygium
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Zebrafish/genetics*
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Zebrafish Proteins
10.Berberine reduces the expression of adipogenic enzymes and inflammatory molecules of 3T3-L1 adipocyte.
Bong Hyuk CHOI ; In Sook AHN ; Yu Hee KIM ; Ji Won PARK ; So Young LEE ; Chang Kee HYUN ; Myoung Soo DO
Experimental & Molecular Medicine 2006;38(6):599-605
Berberine (BBR), an isoquinoline alkaloid, has a wide range of pharmacological effects, yet its exact mechanism is unknown. In order to understand the anti-adipogenic effect of BBR, we studied the change of expression of several adipogenic enzymes of 3T3-L1 cells by BBR treatment. First, we measured the change of leptin and glycerol in the medium of 3T3-L1 cells treated with 1 micrometer, 5 micrometer and 10 micrometer concentrations of BBR. We also measured the changes of adipogenic and lipolytic factors of 3T3-L1. In 3T3-L1 cells, both leptin and adipogenic factors (SREBP-1c, C/EBP-alpha, PPAR-gamma, fatty acid synthase, acetyl-CoA carboxylase, acyl-CoA synthase and lipoprotein lipase) were reduced by BBR treatment. Glycerol secretion was increased, whereas expression of lipolytic enzymes (hormone-sensitive lipase and perilipin) mRNA was slightly decreased. Next, we measured the change of inflammation markers of 3T3-L1 cells by BBR treatment. This resulted in the down-regulation of mRNA level of inflammation markers such as TNF-alpha, IL-6, C- reactive protein and haptoglobin. Taken together, our data shows that BBR has both anti-adipogenic and anti-inflammatory effects on 3T3-L1 adipocytes, and the anti-adipogenic effect seems to be due to the down-regulation of adipogenic enzymes and transcription factors.
RNA, Messenger/genetics/metabolism
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Mice
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Leptin/secretion
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Inflammation Mediators/*metabolism
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Inflammation/genetics
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Glycerol/metabolism
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Gene Expression Regulation/*drug effects
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Cytokines/genetics
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Berberine/*pharmacology
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Animals
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Adipogenesis/drug effects/genetics
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Adipocytes/*drug effects/enzymology/*metabolism/secretion
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3T3-L1 Cells