2.Scientific Hypotheses: Writing, Promoting, and Predicting Implications
Armen Yuri GASPARYAN ; Lilit AYVAZYAN ; Ulzhan MUKANOVA ; Marlen YESSIRKEPOV ; George D KITAS
Journal of Korean Medical Science 2019;34(45):e300-
Scientific hypotheses are essential for progress in rapidly developing academic disciplines. Proposing new ideas and hypotheses require thorough analyses of evidence-based data and predictions of the implications. One of the main concerns relates to the ethical implications of the generated hypotheses. The authors may need to outline potential benefits and limitations of their suggestions and target widely visible publication outlets to ignite discussion by experts and start testing the hypotheses. Not many publication outlets are currently welcoming hypotheses and unconventional ideas that may open gates to criticism and conservative remarks. A few scholarly journals guide the authors on how to structure hypotheses. Reflecting on general and specific issues around the subject matter is often recommended for drafting a well-structured hypothesis article. An analysis of influential hypotheses, presented in this article, particularly Strachan's hygiene hypothesis with global implications in the field of immunology and allergy, points to the need for properly interpreting and testing new suggestions. Envisaging the ethical implications of the hypotheses should be considered both by authors and journal editors during the writing and publishing process.
Allergy and Immunology
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Databases, Bibliographic
;
Ethics, Research
;
Hygiene Hypothesis
;
Peer Review
;
Publications
;
Writing
3.Interpretation of the hygiene and microflora hypothesis for allergic diseases through epigenetic epidemiology
Epidemiology and Health 2018;40(1):2018006-
The hygiene hypothesis (HH) proposed by Strachan in 1989 was expanded to explain the inverse association between the occurrence of allergy disorders and the risk of infectious diseases and parasite infestation. The microflora hypothesis (MH) suggests that gut microbial dysbiosis in early life might trigger hypersensitivity disorders. The sharing concept of both HH and MH is gene-environment interaction, which is also a key concept in epigenetics. The amalgamation of epidemiology and epigenetics has created a scientific discipline termed epigenetic epidemiology. To accomplish an era of gene-environment-wide interaction studies, it is necessary to launch a national human epigenome project.
Allergy and Immunology
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Communicable Diseases
;
Dysbiosis
;
Epidemiology
;
Epigenomics
;
Gastrointestinal Microbiome
;
Gene-Environment Interaction
;
Humans
;
Hygiene Hypothesis
;
Hygiene
;
Hypersensitivity
;
Parasites
4.Interpretation of the hygiene and microflora hypothesis for allergic diseases through epigenetic epidemiology.
Epidemiology and Health 2018;40(1):e2018006-
The hygiene hypothesis (HH) proposed by Strachan in 1989 was expanded to explain the inverse association between the occurrence of allergy disorders and the risk of infectious diseases and parasite infestation. The microflora hypothesis (MH) suggests that gut microbial dysbiosis in early life might trigger hypersensitivity disorders. The sharing concept of both HH and MH is gene-environment interaction, which is also a key concept in epigenetics. The amalgamation of epidemiology and epigenetics has created a scientific discipline termed epigenetic epidemiology. To accomplish an era of gene-environment-wide interaction studies, it is necessary to launch a national human epigenome project.
Allergy and Immunology
;
Communicable Diseases
;
Dysbiosis
;
Epidemiology*
;
Epigenomics*
;
Gastrointestinal Microbiome
;
Gene-Environment Interaction
;
Humans
;
Hygiene Hypothesis
;
Hygiene*
;
Hypersensitivity
;
Parasites
5.Relationship between total IgE and Epstein Barr virus infection during infancy and early childhood.
Mi Kyung LEE ; Gil Ho CHO ; Kye Sung KIM ; Yook JANG ; Hye Young YUM ; Man Yong HAN
Journal of Asthma, Allergy and Clinical Immunology 2002;22(4):679-684
BACKGROUND: The 'hygiene hypothesis', the apparent inverse relationship between certain childhood infections and the subsequent development of asthma and atopy, has been gaining attention and is currently now considered one of the most plausible explanations for the cause of asthma and atopy currently. OBJECTIVE: We tried to evaluate the relationship between Epstein Barr virus infection in infancy and early childhood with total IgE, the hallmark of atopy. with these results, we observed the changing pattern of total IgE levels according to the ages that EBV infection occured. METHODS: The study population, a total of 75 patients were divided by age: under 2 years of age, under 3 years of age, under 4 years of age and then they were divided into the two groups : EBNA negative and EBNA positive groups. EBNA and IgE were measured by ELISA and CLA respectively. We analyzed the relationships between age, sex, family history, atopic predisposition, total eosinophils, log IgE, and positivity of EBNA stastically. RESULTS: Prevalence of EBNA positivity was 26% in children 1-3 years of age. Among the six variables, log IgE showed statistically significant difference in the two groups under 2 years of age and under 3 years of age. In the group of under 2 years of age, mean log IgE in EBNA positive group was 0.7 IU/mL and EBNA negative group was 1.3 IU/mL, these differences were significant statistically (p<0.05). In the group of under 3 years of age , mean log IgE in EBNA positive group was 0.8 IU/mL and EBNA negative group was 1.5 IU/mL, these differences were statistically significant(p<0.05). CONCLUSION: This study showed that Ebstein Barr virus infection before 3 years of age is associated with lower log IgE. This means that there is a possibility of a negative influence in the prevalence of allergic disease by EBV infection in children before 3 years of age.
Asthma
;
Child
;
Enzyme-Linked Immunosorbent Assay
;
Eosinophils
;
Epstein-Barr Virus Infections
;
Herpesvirus 4, Human*
;
Humans
;
Hygiene Hypothesis
;
Immunoglobulin E*
;
Prevalence
6.The Influence of IgE on Cultured Human Mast Cells.
Pernille Munk FRANDSEN ; Inge Jacoba Maria Kortekaas KROHN ; Hans Jurgen HOFFMANN ; Peter Oluf SCHIOTZ
Allergy, Asthma & Immunology Research 2013;5(6):409-414
PURPOSE: The mast cell plays a pivotal role in the human immune response. Crosslinking of 2 IgE molecules bound to the high affinity IgE receptor (FcepsilonRI) on the surface of the mast cell results in mast cell degranulation and the release of several proinflammatory mediators. Patients with type-I allergy have increased levels of IgE in the blood compared to healthy individuals. METHODS: In a 6-week culture system of stem cells to human mast cells we investigated the effect of the concentration of IgE. The mast cells were cultured with different concentrations of IgE for the last 10 days of the maturation period. It was observed how the IgE concentration affects the histamine release, FcepsilonRI density on the mast cell surface and the concentration of other mediators. RESULTS: A clear correlation between IgE concentration in culture medium and the release of histamine upon activation was observed. It showed a bell-shaped dose response curve, with maximal response around an IgE-concentration of 250 ng/mL. Furthermore, the sensitivity of the mast cells and surface density of FcepsilonRI on mast cell surface was also influenced by the IgE concentration in the culture medium. CONCLUSIONS: IgE in the culture medium during the last 10 days of mast cell maturation influences the release of the preformed mediator histamine after mast cell activation and the density of FcepsilonRI on the mast cell surface. The release of the de novo synthetized mediator prostaglandin D2 and the expression of chymase and tryptase are not influenced by IgE in culture medium.
Chymases
;
Histamine
;
Histamine Release
;
Humans
;
Hygiene Hypothesis
;
Hypersensitivity
;
Immunoglobulin E
;
Mast Cells
;
Prostaglandin D2
;
Stem Cells
;
Tryptases
7.The Influence of IgE on Cultured Human Mast Cells.
Pernille Munk FRANDSEN ; Inge Jacoba Maria Kortekaas KROHN ; Hans Jurgen HOFFMANN ; Peter Oluf SCHIOTZ
Allergy, Asthma & Immunology Research 2013;5(6):409-414
PURPOSE: The mast cell plays a pivotal role in the human immune response. Crosslinking of 2 IgE molecules bound to the high affinity IgE receptor (FcepsilonRI) on the surface of the mast cell results in mast cell degranulation and the release of several proinflammatory mediators. Patients with type-I allergy have increased levels of IgE in the blood compared to healthy individuals. METHODS: In a 6-week culture system of stem cells to human mast cells we investigated the effect of the concentration of IgE. The mast cells were cultured with different concentrations of IgE for the last 10 days of the maturation period. It was observed how the IgE concentration affects the histamine release, FcepsilonRI density on the mast cell surface and the concentration of other mediators. RESULTS: A clear correlation between IgE concentration in culture medium and the release of histamine upon activation was observed. It showed a bell-shaped dose response curve, with maximal response around an IgE-concentration of 250 ng/mL. Furthermore, the sensitivity of the mast cells and surface density of FcepsilonRI on mast cell surface was also influenced by the IgE concentration in the culture medium. CONCLUSIONS: IgE in the culture medium during the last 10 days of mast cell maturation influences the release of the preformed mediator histamine after mast cell activation and the density of FcepsilonRI on the mast cell surface. The release of the de novo synthetized mediator prostaglandin D2 and the expression of chymase and tryptase are not influenced by IgE in culture medium.
Chymases
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Histamine
;
Histamine Release
;
Humans
;
Hygiene Hypothesis
;
Hypersensitivity
;
Immunoglobulin E
;
Mast Cells
;
Prostaglandin D2
;
Stem Cells
;
Tryptases
8.The Microbiome and Mental Health: Looking Back, Moving Forward with Lessons from Allergic Diseases.
Alan C LOGAN ; Felice N JACKA ; Jeffrey M CRAIG ; Susan L PRESCOTT
Clinical Psychopharmacology and Neuroscience 2016;14(2):131-147
Relationships between gastrointestinal viscera and human emotions have been documented by virtually all medical traditions known to date. The focus on this relationship has waxed and waned through the centuries, with noted surges in interest driven by cultural forces. Here we explore some of this history and the emerging trends in experimental and clinical research. In particular, we pay specific attention to how the hygiene hypothesis and emerging research on traditional dietary patterns has helped re-ignite interest in the use of microbes to support mental health. At present, the application of microbes and their structural parts as a means to positively influence mental health is an area filled with promise. However, there are many limitations within this new paradigm shift in neuropsychiatry. Impediments that could block translation of encouraging experimental studies include environmental forces that work toward dysbiosis, perhaps none more important than westernized dietary patterns. On the other hand, it is likely that specific dietary choices may amplify the value of future microbial-based therapeutics. Pre-clinical and clinical research involving microbiota and allergic disorders has predated recent work in psychiatry, an early start that provides valuable lessons. The microbiome is intimately connected to diet, nutrition, and other lifestyle variables; microbial-based psychopharmacology will need to consider this contextual application, otherwise the ceiling of clinical expectations will likely need to be lowered.
Allergy and Immunology
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Anxiety
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Depression
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Diet
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Dysbiosis
;
Hand
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Humans
;
Hygiene Hypothesis
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Life Style
;
Mental Health*
;
Microbiota*
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Neuropsychiatry
;
Psychopharmacology
;
Viscera
;
Child Health
9.Novel Risk Factors for Allergic Rhinitis in Korean Elementary School Children: ARCO-kids Phase II in a Community.
Doo Hee HAN ; Jae Cheul AHN ; Sue Jean MUN ; Sue K PARK ; Se Young OH ; Chae Seo RHEE
Allergy, Asthma & Immunology Research 2015;7(3):234-240
PURPOSE: Allergic rhinitis (AR) is a multifactorial disease whose genetic and environmental risk factors have been studied for decades. Many pediatric studies have pointed out the familial history of allergy, hygiene hypothesis, breast-feeding, pet ownership, and diets as risk factors of AR. However, most of factors are still up for debate. This preliminary report aimed to confirm the known risk factors and find the novel risk factors for AR in the Korean pediatric population. METHODS: A bi-seasonal, winter and summer, study in 2 elementary schools included all students whose parents completed the questionnaire of medical and social histories, quality of life, infant and early-childhood history, and the living styles. Skin prick tests and endoscopic examinations were conducted on all participants. RESULTS: Among total 1,020 children, 338 participants had AR. The multivariate logistic regression analysis highlighted 6 factors: male gender (OR, 2.10; 95% CI, 1.32-3.33), older age (1.65; 1.03-2.65), previous history of allergic conjunctivitis (14.25; 4.99-40.74), asthma (2.73; 0.96-7.76) and pneumonia (0.39; 0.19-0.82), and an hour increase in daily playing time (0.90; 0.80-1.00). CONCLUSIONS: Lack of pneumonia in early childhood and short playing time are newly found risk factors for Korean pediatric AR in this study confirming male gender, older age and previous history of allergic conjunctivitis and asthma as the risk factors.
Asthma
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Child*
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Conjunctivitis, Allergic
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Diet
;
Humans
;
Hygiene Hypothesis
;
Hypersensitivity
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Infant
;
Logistic Models
;
Male
;
Ownership
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Parents
;
Pneumonia
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Quality of Life
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Rhinitis*
;
Risk Factors*
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Skin
;
Surveys and Questionnaires
10.Update in the Pathogenesis of Inflammatory Bowel Disease.
Journal of the Korean Society of Coloproctology 2008;24(4):302-309
Inflammatory bowel disease (IBD) is a multifactorial disease characterized by abnormal immunologic responses to intestinal antigen, and its causes have not yet been clarified. IBD is known to be due to a complexity of environmental, genetic, and abnormal immunological responses. The hygiene hypothesis remains the key hypothesis for explaining the increase in the incidence of IBD, and smoking is the strongest of the known external environmental factors. Since the detection of the NOD2/CARD15 gene in 2001, rapid progress has occurred, and recently, an important relation between the IL23R gene and IBD has been established. Although studies of normal flora in IBD have some difficulties in methodology, the theory that the loss of immune tolerance to normal flora in the bowel results in IBD is still believed. Incomplete adaptation of innate and adaptive immunity is also one of the important pathogenesis. The toll-like receptor family and the NOD-like receptor family have a important role in the pathologic condition. As to adaptive immunity, in Crohn's disease, the Th1 phenotype is known to be involved, and in ulcerative colitis, the Th2 phenotype cytokines are known to be involved. However, recently, the roles of new cytokines and variable phenotypic lymphocytes have attracted interest. We can clarify the relations of inflammatory pathway-specific and molecular classification of the phenotypes of patients in 10~20 years if progress continues at the same rate as during the last 10 years. We also expected to develop a new therapeutic approach based on these efforts.
Adaptive Immunity
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Colitis, Ulcerative
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Crohn Disease
;
Cytokines
;
Humans
;
Hygiene Hypothesis
;
Immune Tolerance
;
Incidence
;
Inflammatory Bowel Diseases
;
Lymphocytes
;
Phenotype
;
Smoke
;
Smoking
;
Toll-Like Receptors