1.Got target?: computational methods for microRNA target prediction and their extension.
Experimental & Molecular Medicine 2010;42(4):233-244
MicroRNAs (miRNAs) are a class of small RNAs of 19-23 nucleotides that regulate gene expression through target mRNA degradation or translational gene silencing. The miRNAs are reported to be involved in many biological processes, and the discovery of miRNAs has been provided great impacts on computational biology as well as traditional biology. Most miRNA-associated computational methods comprise the prediction of miRNA genes and their targets, and increasing numbers of computational algorithms and web-based resources are being developed to fulfill the need of scientists performing miRNA research. Here we summarize the rules to predict miRNA targets and introduce some computational algorithms that have been developed for miRNA target prediction and the application of the methods. In addition, the issue of target gene validation in an experimental way will be discussed.
2.The Non-Communicable Disease Burden in Korea: Findings from the 2012 Korean Burden of Disease Study.
Jihyun YOON ; Hyeyoung SEO ; In Hwan OH ; Seok Jun YOON
Journal of Korean Medical Science 2016;31(Suppl 2):S158-S167
In recognition of Korea's rising burden of non-communicable diseases (NCDs), we investigated the nation's NCD status and extracted detailed information from the 2012 Korean Burden of Disease study. Consistent with that study, we used disability-adjusted life year (DALY) as a metric. Using national data sources and disability weights specific to the Korean population, we analyzed 116 disaggregated NCDs from the study's four-level disease and injury hierarchy for both sexes and nine age groups. Per 100,000 population, 21,019 DALYs were lost to 116 NCDs. Of those, 13.97% were due to premature death (death prior to the standard life expectancy for a subject's age) and 86.03% to non-fatal health outcomes. Based on traditional statistics, the main causes of health loss were mortality of neoplasms; cardiovascular and circulatory diseases; diabetes, urogenital, blood, and endocrine diseases; and chronic respiratory diseases. When combined with analyses of premature death and non-fatal outcomes, however, a substantially different view emerged: the main causes of health loss were diabetes mellitus, low back pain, chronic obstructive pulmonary disease, ischemic heart disease, ischemic stroke, cirrhosis of the liver, osteoarthritis, asthma, gastritis and duodenitis, and periodontal disease (in that order), collectively causing 49.20% of DALYs. Thus, burden of disease data using DALYs rather than traditional statistics brings a new perspective to characterization of the population's health that provides practical information useful for developing and targeting national NCD control programs to better meet national needs.
Asthma
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Diabetes Mellitus
;
Duodenitis
;
Endocrine System Diseases
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Fibrosis
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Gastritis
;
Humans
;
Information Storage and Retrieval
;
Korea*
;
Life Expectancy
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Liver
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Low Back Pain
;
Mortality
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Mortality, Premature
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Myocardial Ischemia
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Osteoarthritis
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Periodontal Diseases
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Pulmonary Disease, Chronic Obstructive
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Stroke
;
Weights and Measures
3.Erratum: Correction of Funding Source: The Burden of Cancer in Korea during 2012: Finding from a Prevalence-Based Approach.
Young hoon GONG ; Seok jun YOON ; Min woo JO ; Arim KIM ; Young Ae KIM ; Jihyun YOON ; Hyeyoung SEO ; Dong woo KIM
Journal of Korean Medical Science 2017;32(1):164-164
We found a mistake in our recently published article.
4.Associations Between the Continuity of Ambulatory Care of Adult Diabetes Patients in Korea and the Incidence of Macrovascular Complications.
Young Hoon GONG ; Seok Jun YOON ; Hyeyoung SEO ; Dongwoo KIM
Journal of Preventive Medicine and Public Health 2015;48(4):188-194
OBJECTIVES: The goal of this study was to identify association between the continuity of ambulatory care of diabetes patients in South Korea (hereafter Korea) and the incidence of macrovascular complications of diabetes, using claims data compiled by the National Health Insurance Services of Korea. METHODS: This study was conducted retrospectively. The subjects of the study were 43 002 patients diagnosed with diabetes in 2007, who were over 30 years of age, and had insurance claim data from 2008. The macrovascular complications of diabetes mellitus were limited to ischemic heart disease and ischemic stroke. We compared the characteristics of the patients in whom macrovascular complications occurred from 2009 to 2012 to the characteristics of the patients who had no such complications. Multiple logistic regression was used to assess the effects of continuity of ambulatory care on diabetic macrovascular complications. The continuity of ambulatory diabetes care was estimated by metrics such as the medication possession ratio, the quarterly continuity of care and the number of clinics that were visited. RESULTS: Patients with macrovascular complications showed statistically significant differences regarding sex, age, comorbidities, hypertension, dyslipidemia and continuity of ambulatory diabetes care. Visiting a lower number of clinics reduced the odds ratio for macrovascular complications of diabetes. A medication possession ratio below 80% was associated with an increased odds ratio for macrovascular complications, but this result was of borderline statistical significance. CONCLUSIONS: Diabetes care by regular health care providers was found to be associated with a lower occurrence of diabetic macrovascular complications. This result has policy implications for the Korean health care system, in which the delivery system does not work properly.
Adult
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Aged
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Aged, 80 and over
;
*Ambulatory Care
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Diabetes Complications
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Diabetes Mellitus/*diagnosis
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Dyslipidemias/complications
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Female
;
Heart Diseases/*epidemiology/etiology
;
Humans
;
Hypertension/complications
;
Incidence
;
Insurance Claim Reporting
;
Logistic Models
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Male
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Middle Aged
;
Odds Ratio
;
Republic of Korea/epidemiology
;
Retrospective Studies
;
Risk Factors
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Stroke/*epidemiology/etiology
5.Health Performance and Challenges in Korea: a Review of the Global Burden of Disease Study 2013.
Yo Han LEE ; Seok Jun YOON ; Arim KIM ; Hyeyoung SEO ; Seulki KO
Journal of Korean Medical Science 2016;31(Suppl 2):S114-S120
The global burden of disease study (GBD) provides valuable information for evaluating population health in terms of disease burden. This study collected and reviewed GBD data in Korea for the year 1990 and 2013. The burdens of cancer, cardiovascular disease, communicable disease, and injuries have decreased remarkably, thereby greatly diminishing the overall disease burden on Korea. Meanwhile, the burdens due to non-fatal chronic diseases such as neuropsychiatric and musculoskeletal disease became major burden contributors. Responding to this circumstance presents a complex challenge to the Korean health system and Korean health policy.
Cardiovascular Diseases
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Chronic Disease
;
Communicable Diseases
;
Health Policy
;
Korea*
;
Musculoskeletal Diseases
6.Sonographic Appearance of Steatocystoma: An Analysis of 14 Pathologically Confirmed Lesions
Hyeyoung YOON ; Yusuhn KANG ; Hwiryong PARK ; Joong Mo AHN ; Eugene LEE ; Joon Woo LEE ; Heung Sik KANG
Journal of the Korean Radiological Society 2021;82(2):382-392
Purpose:
To evaluate the ultrasonographic characteristics of steatocystomas focusing on the features that aid in differentiating them from epidermal inclusion cysts and lipomas.
Materials and Methods:
The ultrasonographic findings of 14 histologically proven steatocystomas in 10 patients were retrospectively reviewed. The following features were assessed: the layer of involvement, shape, margin, echogenicity, posterior acoustic features, and the presence of a visible wall or intralesional striations. The findings were compared with those of subcutaneous lipomas and epidermal inclusion cysts to identify those findings that aid in the differential diagnosis of steatocystomas.
Results:
The majority of steatocystomas appeared as a subcutaneous mass (n = 6, 42.9%) or a mass involving both the dermal and subcutaneous layers (n = 6, 42.9%). Steatocystomas exhibited a well-defined smooth margin (n = 12, 85.7%) and homogeneous echogenicity (n = 9, 64.3%), and showed no specific posterior acoustic features (n = 9, 64.3%). The most important features that differentiated steatocystomas from epidermal inclusion cysts were a homogeneous internal echotexture (p = 0.009) and absent or less prominent posterior acoustic enhancement (p < 0.001). The features that distinguished steatocystomas from lipomas were the margin (p < 0.001), echogenicity (p = 0.034), internal echotexture (p = 0.004), and the absence of intralesional striations (p < 0.001).
Conclusion
Steatocystomas appeared as well-defined homogeneous masses with mild or absent posterior acoustic enhancement.
7.Sonographic Appearance of Steatocystoma: An Analysis of 14 Pathologically Confirmed Lesions
Hyeyoung YOON ; Yusuhn KANG ; Hwiryong PARK ; Joong Mo AHN ; Eugene LEE ; Joon Woo LEE ; Heung Sik KANG
Journal of the Korean Radiological Society 2021;82(2):382-392
Purpose:
To evaluate the ultrasonographic characteristics of steatocystomas focusing on the features that aid in differentiating them from epidermal inclusion cysts and lipomas.
Materials and Methods:
The ultrasonographic findings of 14 histologically proven steatocystomas in 10 patients were retrospectively reviewed. The following features were assessed: the layer of involvement, shape, margin, echogenicity, posterior acoustic features, and the presence of a visible wall or intralesional striations. The findings were compared with those of subcutaneous lipomas and epidermal inclusion cysts to identify those findings that aid in the differential diagnosis of steatocystomas.
Results:
The majority of steatocystomas appeared as a subcutaneous mass (n = 6, 42.9%) or a mass involving both the dermal and subcutaneous layers (n = 6, 42.9%). Steatocystomas exhibited a well-defined smooth margin (n = 12, 85.7%) and homogeneous echogenicity (n = 9, 64.3%), and showed no specific posterior acoustic features (n = 9, 64.3%). The most important features that differentiated steatocystomas from epidermal inclusion cysts were a homogeneous internal echotexture (p = 0.009) and absent or less prominent posterior acoustic enhancement (p < 0.001). The features that distinguished steatocystomas from lipomas were the margin (p < 0.001), echogenicity (p = 0.034), internal echotexture (p = 0.004), and the absence of intralesional striations (p < 0.001).
Conclusion
Steatocystomas appeared as well-defined homogeneous masses with mild or absent posterior acoustic enhancement.
8.The Burden of Cancer in Korea during 2012: Findings from a Prevalence-Based Approach.
Young Hoon GONG ; Seok Jun YOON ; Min Woo JO ; Arim KIM ; Young Ae KIM ; Jihyun YOON ; Hyeyoung SEO ; Dongwoo KIM
Journal of Korean Medical Science 2016;31(Suppl 2):S168-S177
Cancer causes a significant deterioration in health and premature death and is a national socioeconomic burden. This study aimed to measure the burden of cancer using the disability-adjusted life year (DALY) metric based on the newly adopted methodology from the Global Burden of Disease Study in 2010. This study was conducted based on data from the Korean National Cancer Registry. The DALYs were calculated using a prevalence-based method instead of the incidence-based method used by previous studies. The total burden of cancer in 2012 was 3,470.79 DALYs per 100,000 persons. Lung cancer was the most prevalent cancer burden, followed by liver, stomach, colorectal, and breast cancer. The DALYs for lung, liver, stomach, colon and rectum, and pancreatic cancer were high in men, whereas the DALYs for breast, lung, stomach, colorectal, and liver cancer were high in women. Health loss from leukemia and cancer of the brain and nervous system was prevalent for those younger than age 20; from stomach, breast, and liver for those aged 30–50; and from lung, colon and rectum, and pancreas for a large proportion of individuals over the age of 60. The most important differences were that the DALYs were calculated by prevalence and that other components of the DALYs were measured by a population-based perspective. Thus, prevalence-based DALYs could provide more suitable data for decision making in the healthcare field.
Brain Neoplasms
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Breast
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Breast Neoplasms
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Colon
;
Decision Making
;
Delivery of Health Care
;
Female
;
Humans
;
Korea*
;
Leukemia
;
Liver
;
Liver Neoplasms
;
Lung
;
Lung Neoplasms
;
Male
;
Methods
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Mortality, Premature
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Nervous System
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Pancreas
;
Pancreatic Neoplasms
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Prevalence
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Rectum
;
Stomach
9.Korean Patients Undergoing Deceased Donor Liver Transplantation for Alcoholic Liver Disease Have Non-Inferior Survival Outcomes than for Hepatitis B Virus: a Real-World Experience without Minimum Abstinence before Transplantation.
Suk Kyun HONG ; Nam Joon YI ; Hyo Sin KIM ; Sung Woo AHN ; Kyung Chul YOON ; Hyeyoung KIM ; Kwang Woong LEE ; Kyung Suk SUH
Journal of Korean Medical Science 2017;32(6):919-925
Few studies have compared outcomes in patients undergoing liver transplantation (LT) for hepatitis B virus (HBV) and alcoholic liver disease (ALD) in Asian countries in which living donor LT (LDLT) is dominant, where HBV is endemic and where there are no strict regulations on pre-transplant abstinence for ALD. This study compared post-LT outcomes of deceased donor LT (DDLT) in patients with ALD and HBV. Data from 220 patients who underwent primary DDLT at Seoul National University Hospital from January 2010 to December 2014, including 107 with HBV and 38 with ALD, were retrospectively analyzed. Seventy-four patients (69.2%) in the HBV group and 30 (78.9%) in the ALD group had United Network for Organ Sharing (UNOS) status 2A (P = 0.250). There were no significant differences in their 1-year (90.7% vs. 92.1%) and 3-year (82.1% vs. 82.3%) overall survival rates (P = 1.000). Multivariate analysis showed that high serum gamma glutamyltransferase concentration (≥ 70 IU/L) was independently prognostic of 1-year post-LT overall survival. Survival outcomes following DDLT were similar in Korean patients with ALD and HBV, even in the absence of strict pre-transplant abstinence from alcohol as a selection criterion.
Alcoholics*
;
Asian Continental Ancestry Group
;
gamma-Glutamyltransferase
;
Hepatitis B virus*
;
Hepatitis B*
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Hepatitis*
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Humans
;
Liver Cirrhosis
;
Liver Diseases, Alcoholic*
;
Liver Transplantation*
;
Liver*
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Living Donors
;
Multivariate Analysis
;
Retrospective Studies
;
Seoul
;
Social Control, Formal
;
Survival Rate
;
Tissue Donors*
10.A case of primary small cell neuroendocrine carcinoma of the liver.
June Young YOON ; Hyoung Jung CHUNG ; Hyeyoung CHOI ; Jong Su CHOI ; Dae Woon EOM ; Ho Suk OH
Korean Journal of Medicine 2010;79(1):67-71
Extrapulmonary small cell carcinoma is a highly malignant and poorly differentiated neuroendocrine tumor. The overall incidence in the United States is approximately 0.1~0.4%. Moreover, small cell carcinoma of the liver is extremely rare and few cases have been reported in the literature. We experienced a 65-year-old woman with a 15 cm hepatic mass, which was localized in the left lobe of a noncirrhotic liver. The mass was confirmed as small cell carcinoma by immunohistochemical staining of a biopsy specimen. Other possible primary sites were excluded by radiologic and endoscopic evaluations. The patient was treated with combination chemotherapy. She was in partial response on the last follow-up visit.
Aged
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Biopsy
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Carcinoma, Neuroendocrine
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Carcinoma, Small Cell
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Drug Therapy, Combination
;
Female
;
Follow-Up Studies
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Humans
;
Incidence
;
Liver
;
Neuroendocrine Tumors
;
United States