1.Predicting Autism Spectrum Disorder Using Blood-based Gene Expression Signatures and Machine Learning.
Dong Hoon OH ; Il Bin KIM ; Seok Hyeon KIM ; Dong Hyun AHN
Clinical Psychopharmacology and Neuroscience 2017;15(1):47-52
OBJECTIVE: The aim of this study was to identify a transcriptomic signature that could be used to classify subjects with autism spectrum disorder (ASD) compared to controls on the basis of blood gene expression profiles. The gene expression profiles could ultimately be used as diagnostic biomarkers for ASD. METHODS: We used the published microarray data (GSE26415) from the Gene Expression Omnibus database, which included 21 young adults with ASD and 21 age- and sex-matched unaffected controls. Nineteen differentially expressed probes were identified from a training dataset (n=26, 13 ASD cases and 13 controls) using the limma package in R language (adjusted p value <0.05) and were further analyzed in a test dataset (n=16, 8 ASD cases and 8 controls) using machine learning algorithms. RESULTS: Hierarchical cluster analysis showed that subjects with ASD were relatively well-discriminated from controls. Based on the support vector machine and K-nearest neighbors analysis, validation of 19-DE probes with a test dataset resulted in an overall class prediction accuracy of 93.8% as well as a sensitivity and specificity of 100% and 87.5%, respectively. CONCLUSION: The results of our exploratory study suggest that the gene expression profiles identified from the peripheral blood samples of young adults with ASD can be used to identify a biological signature for ASD. Further study using a larger cohort and more homogeneous datasets is required to improve the diagnostic accuracy.
Autism Spectrum Disorder*
;
Autistic Disorder*
;
Biomarkers
;
Cohort Studies
;
Dataset
;
Decision Support Techniques
;
Gene Expression*
;
Humans
;
Machine Learning*
;
Microarray Analysis
;
Sensitivity and Specificity
;
Support Vector Machine
;
Transcriptome*
;
Young Adult
2.Correlation between obesity and pelvic organ prolapse in Korean women
Bo Hye KIM ; Soo Bin LEE ; Eun Duc NA ; Hyeon Chul KIM
Obstetrics & Gynecology Science 2020;63(6):719-725
Objective:
This study aimed to evaluate the correlation between obesity and pelvic organ prolapse (POP), both anatomically and symptomatically, in Korean women.
Methods:
We retrospectively reviewed 476 women who visited the urogynecology clinic between January 2013 and December 2016. All the enrolled women were Korean. We sought to evaluate the relationship between obesity and POP, both anatomically and symptomatically, by using a validated tool. Anatomic assessment was performed by a standardized Pelvic Organ Prolapse Quantification (POP-Q) system and symptomatic assessment was performed by a Pelvic Floor Distress Inventory (PFDI)-20 questionnaire. Obesity measurement was performed by measuring body mass index (BMI).
Results:
We enrolled 476 women in our study. There was no statistically significant correlation between BMI and POP-Q or PFDI-20 scores: Ba (P=0.633), Bp (P=0.363), C (P=0.277), Pelvic Organ Prolapse Distress Inventory-6 (P=0.286), Colorectal Anal Distress Inventory-8 (P=0.960), Urinary Distress Inventory-6 (P=0.355), and PFDI-20 (P=0.355). In addition, there was no statistically significant correlation between BMI and POP-Q or PFDI-20 in patients with severe (greater than stage III) POP. We also separately analyzed the differences in the POP-Q points and PFDI-20 scores between the obese and non-obese groups. There was no statistically significant difference between the groups.
Conclusion
We evaluated the correlation between obesity and POP using a validated tool. The present study revealed no significant correlation between obesity and POP severity anatomically or symptomatically in Korean women. This contrasts the results of most studies of Western women. Further studies in Asian women are required in order to confirm our results.
3.Correlation between obesity and pelvic organ prolapse in Korean women
Bo Hye KIM ; Soo Bin LEE ; Eun Duc NA ; Hyeon Chul KIM
Obstetrics & Gynecology Science 2020;63(6):719-725
Objective:
This study aimed to evaluate the correlation between obesity and pelvic organ prolapse (POP), both anatomically and symptomatically, in Korean women.
Methods:
We retrospectively reviewed 476 women who visited the urogynecology clinic between January 2013 and December 2016. All the enrolled women were Korean. We sought to evaluate the relationship between obesity and POP, both anatomically and symptomatically, by using a validated tool. Anatomic assessment was performed by a standardized Pelvic Organ Prolapse Quantification (POP-Q) system and symptomatic assessment was performed by a Pelvic Floor Distress Inventory (PFDI)-20 questionnaire. Obesity measurement was performed by measuring body mass index (BMI).
Results:
We enrolled 476 women in our study. There was no statistically significant correlation between BMI and POP-Q or PFDI-20 scores: Ba (P=0.633), Bp (P=0.363), C (P=0.277), Pelvic Organ Prolapse Distress Inventory-6 (P=0.286), Colorectal Anal Distress Inventory-8 (P=0.960), Urinary Distress Inventory-6 (P=0.355), and PFDI-20 (P=0.355). In addition, there was no statistically significant correlation between BMI and POP-Q or PFDI-20 in patients with severe (greater than stage III) POP. We also separately analyzed the differences in the POP-Q points and PFDI-20 scores between the obese and non-obese groups. There was no statistically significant difference between the groups.
Conclusion
We evaluated the correlation between obesity and POP using a validated tool. The present study revealed no significant correlation between obesity and POP severity anatomically or symptomatically in Korean women. This contrasts the results of most studies of Western women. Further studies in Asian women are required in order to confirm our results.
4.Trends in socioeconomic inequalities in obesity among Korean adolescents: the Korea Youth Risk Behavior Web-based Survey (KYRBS) 2006 to 2020
Eunji KIM ; Ga Bin LEE ; Dong Keon YON ; Hyeon Chang KIM
Epidemiology and Health 2023;45(1):e2023033-
OBJECTIVES:
This study investigated recent trends in the prevalence of obesity among Korean adolescents and explored socioeconomic disparities in obesity.
METHODS:
This study used annual self-reported data on height, weight, and socioeconomic information from the Korea Youth Risk Behavior Web-based Survey from 2006 to 2020. With a 95.8% response rate, the sample consisted of 818,210 adolescents. Obesity prevalence was calculated according to 4 socioeconomic indicators (household income, father’s educational attainment, mother’s educational attainment, and urbanicity). Socioeconomic inequality was quantified using the relative index of inequality (RII).
RESULTS:
The overall prevalence of obesity increased, doubling from 5.9% in 2006 to 11.7% in 2020. Boys and high school students showed a higher prevalence. The RIIs in household income and parental educational attainments significantly increased with time, indicating a growing inequality in obesity. Socioeconomic disadvantages had a greater influence on obesity among girls. The most recent RII values for boys were 1.25 for income, 1.79 for the father’s education, and 1.45 for the mother’s education, whereas the corresponding values for girls were 2.49, 3.17, and 2.62, respectively.
CONCLUSIONS
These findings highlight growing inequalities in adolescent obesity according to household income and parental educational attainments, especially for girls and middle schoolers.
5.Prognostic factors associated with the success rates of posterior orthodontic miniscrew implants: A subgroup meta-analysis.
Sung Bin HONG ; Budi KUSNOTO ; Eun Jeong KIM ; Ellen A BEGOLE ; Hyeon Shik HWANG ; Hoi Jeong LIM
The Korean Journal of Orthodontics 2016;46(2):111-126
OBJECTIVE: To systematically review previous studies and to assess, via a subgroup meta-analysis, the combined odds ratio (OR) of prognostic factors affecting the success of miniscrew implants (MIs) inserted into the buccal posterior region. METHODS: Three electronic searches that were limited to articles on clinical human studies using MIs that were published in English prior to March 2015 were conducted. The outcome measure was the success of MIs. Patient factors included age, sex, and jaw of insertion (maxilla vs. mandible), while the MI factors included length and diameter. A meta-analysis was performed on 17 individual studies. The quality of each study was assessed for non-randomized studies and quantified using the Newcastle-Ottawa Scale. The meta-analysis outcome was a combined OR. Subgroup and sensitivity analyses based on the study design, study quality, and sample size of miniscrews implanted were performed. RESULTS: Significantly higher success rates were revealed for MIs inserted in the maxilla, for patients ≥ 20 years of age, and for long MIs (≥ 8 mm) and MIs with a large diameter (> 1.4 mm). All subgroups acquired homogeneity, and the combined OR of the prospective studies (OR, 3.67; 95% confidence interval [CI], 2.10-6.44) was significantly higher in the maxilla than that in the retrospective studies (OR, 2.10; 95% CI, 1.60-2.74). CONCLUSIONS: When a treatment plan is made, these risk factors, i.e. jaw of insertion, age, MI length, and MI diameter, should be taken into account, while sex is not critical to the success of MIs.
Humans
;
Jaw
;
Maxilla
;
Odds Ratio
;
Outcome Assessment (Health Care)
;
Prospective Studies
;
Retrospective Studies
;
Risk Factors
;
Sample Size
6.Dose-Response Association between Smoking Cessation and Arterial Stiffness: The Cardiovascular and Metabolic Diseases Etiology Research Center (CMERC) Cohort
Ga Bin LEE ; Jee Seon SHIM ; Hyeon Chang KIM
Korean Circulation Journal 2020;50(4):361-369
BACKGROUND AND OBJECTIVES: Cigarette smoking has been reported to be associated with arterial stiffness. However, the clinical relevance of smoking cessation on arterial stiffness is debatable. Thus, we evaluated whether smoking cessation is associated with arterial stiffness.METHODS: A total of 1,169 male participants aged 30–64 years with absence of cardiovascular diseases in 2013–2017 were selected from the Cardiovascular and Metabolic Disease Etiology Research Center cohort study. The subjects were classified into the following 5 groups based on self-reporting: non-smokers, former smokers (<1, 1 to <10, and ≥10, years after cessation), and current smokers. Arterial stiffness was assessed using the augmentation index (AIx). The radial artery AIx was obtained from the peripheral artery waveform. The association was explored cross-sectionally.RESULTS: The AIx of former smokers did not differ from that of non-smokers (p=0.089). However, after former smokers were stratified by duration of smoking cessation, we noted a linear trend according to the smoking status (p<0.001). Men who quit smoking <1 year ago showed an elevated AIx (β=3.94, standard error=1.54, p=0.011) as much as ones of current smokers (β=4.39, standard error=0.74, p<0.001), while those who quit more than a decade ago showed an AIx similar to that of non-smokers (β=0.35, standard error=0.82, p=0.670) after controlling covariates.CONCLUSIONS: A dose-response association between smoking cessation and AIx was revealed, which implies the possibility of a reversible effect of smoking cessation on arterial stiffness. Therefore, our findings may motivate current smokers to modify their smoking habits to delay or reverse disease progression.
Arteries
;
Cardiovascular Diseases
;
Cohort Studies
;
Disease Progression
;
Health Behavior
;
Humans
;
Male
;
Metabolic Diseases
;
Radial Artery
;
Smoke
;
Smoking Cessation
;
Smoking
;
Vascular Stiffness
7.Dose-Response Association between Smoking Cessation and Arterial Stiffness: The Cardiovascular and Metabolic Diseases Etiology Research Center (CMERC) Cohort
Ga Bin LEE ; Jee Seon SHIM ; Hyeon Chang KIM
Korean Circulation Journal 2020;50(4):361-369
BACKGROUND AND OBJECTIVES:
Cigarette smoking has been reported to be associated with arterial stiffness. However, the clinical relevance of smoking cessation on arterial stiffness is debatable. Thus, we evaluated whether smoking cessation is associated with arterial stiffness.
METHODS:
A total of 1,169 male participants aged 30–64 years with absence of cardiovascular diseases in 2013–2017 were selected from the Cardiovascular and Metabolic Disease Etiology Research Center cohort study. The subjects were classified into the following 5 groups based on self-reporting: non-smokers, former smokers (<1, 1 to <10, and ≥10, years after cessation), and current smokers. Arterial stiffness was assessed using the augmentation index (AIx). The radial artery AIx was obtained from the peripheral artery waveform. The association was explored cross-sectionally.
RESULTS:
The AIx of former smokers did not differ from that of non-smokers (p=0.089). However, after former smokers were stratified by duration of smoking cessation, we noted a linear trend according to the smoking status (p<0.001). Men who quit smoking <1 year ago showed an elevated AIx (β=3.94, standard error=1.54, p=0.011) as much as ones of current smokers (β=4.39, standard error=0.74, p<0.001), while those who quit more than a decade ago showed an AIx similar to that of non-smokers (β=0.35, standard error=0.82, p=0.670) after controlling covariates.
CONCLUSIONS
A dose-response association between smoking cessation and AIx was revealed, which implies the possibility of a reversible effect of smoking cessation on arterial stiffness. Therefore, our findings may motivate current smokers to modify their smoking habits to delay or reverse disease progression.
8.A case of alveolar soft part sarcoma of the vagina.
Dong Bin KIM ; Dong Soo CHA ; Hyeon Chul KIM ; Young Jin LEE ; Hyuck Dong HAN ; Dae Hyun KIM ; Sang Yeop YI
Korean Journal of Obstetrics and Gynecology 1993;36(7):3197-3203
No abstract available.
Sarcoma, Alveolar Soft Part*
;
Vagina*
9.The Methicillin-Resistance Rate of Staphylococcus aureus Isolatd from Anterior Nares of Healthy Adults in the Community.
Hong Bin KIM ; Dong Hyeon SHIN ; Kyung Un PARK ; Myoung Don OH ; Eui Chong KIM ; Kang Won CHOE
Korean Journal of Infectious Diseases 1998;30(6):527-531
BACKGROUND: About 80% of nosocomial Stap hylococcus aureus isolates demonstrate methicillin resistance in Korea. To assess the prevalence of methicillin- resistant S. aureus (MRSA) in the community, we screened the nasal S. aureus isolates from healthy adults. METHODS: Nasal cultures were collected from healthy adults without known risk factors for acquisition of MRSA. Antimicrobial susceptibility of S. aureus isolates against oxacillin were determined using the E- test and the disk diffusion method. Methicillin resistant isolates were tested for the mecA gene by polymerase chain reaction. RESULTS: Total 689 subjects were studied. The point prevalence of S. aureus was 33% (227/689). Sixteen isolates of S. aureus grew on the MRSA screening plates(MAO), of which 5(2.2%) were resistant to oxacillin and positive for the mecA gene. CONCLUSION: Less than 5% (95% CI; 1 ~5%) of the nasal S. aureus isolates in the community were methicillin-resistant.
Adult*
;
Diffusion
;
Humans
;
Korea
;
Mass Screening
;
Methicillin Resistance
;
Methicillin-Resistant Staphylococcus aureus
;
Oxacillin
;
Polymerase Chain Reaction
;
Prevalence
;
Risk Factors
;
Staphylococcus aureus*
;
Staphylococcus*
10.A Case of Hypertrophic Cranial Pachymeningitis Presenting with Scleritis in a Patient with Undifferentiated Connective Tissue Disease.
Ji Hyeon KIM ; Young Bin JOO ; Jeana KIM ; Jun Ki MIN
Journal of Korean Medical Science 2010;25(6):966-969
Hypertrophic cranial pachymeningitis (HCP) is an uncommon disorder that causes a localized or diffuse thickening of the dura mater and has been reported to be infrequently associated with systemic autoimmune disorders such as Wegener's granulomatosis, rheumatoid arthritis, sarcoidosis, Behcet's disease, Sjogren syndrome, and temporal arteritis. Here, we report a case of HCP initially presented with scleritis and headache in a patient with undifferenciated connective tissue disease (UCTD). HCP was initially suspected on brain magnetic resonance imaging and defined pathologically on meningial biopsy. Immunologic studies showed the presence of anti-RNP antibody. After high dose corticosteroid therapy, the patient's symptoms and radiologic abnormalities of brain were improved. Our case suggested that HCP should be considered in the differential diagnosis of headache in a patient with UCTD presenting with scleritis.