1.Culturable Fungal Endophytes Isolated from the Roots of Coastal Plants Inhabiting Korean East Coast.
Hyun KIM ; Young Hyun YOU ; Hyeokjun YOON ; Yeonggyo SEO ; Ye Eun KIM ; Yeon Sik CHOO ; In Jung LEE ; Jae Ho SHIN ; Jong Guk KIM
Mycobiology 2014;42(2):100-108
Twelve plant species were collected from the east coast of Korea to identify culturable endophytes present in their roots. The fungal internal transcribe spacer (ITS) region (ITS1-5.8SrRNA-ITS2) was used as a DNA barcode for identification of fungi. A total of 194 fungal strains were identified and categorized into 31 genera. The genus Penicillium accounted for the largest number of strains, followed by the genus Aspergillus. Furthermore, using 5 statistical methods, the diversity indices of the fungi were calculated at the genus level. After comprehensive evaluation, the endophytic fungal group from Phragmites australis ranked highest in diversity analyses. Several strains responsible for plant growth and survival (Penicillium citrinum, P. funiculosum, P. janthinellum, P. restrictum, and P. simplicissimum), were also identified. This study provides basic data on the sheds light on the symbiotic relationship between coastal plants and fungi.
Aspergillus
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DNA
;
Endophytes*
;
Fungi
;
Korea
;
Penicillium
;
Plants
2.Diversity and Plant Growth Promoting Capacity of Endophytic Fungi Associated with Halophytic Plants from the West Coast of Korea.
Irina KHALMURATOVA ; Hyun KIM ; Yoon Jong NAM ; Yoosun OH ; Min Ji JEONG ; Hye Rim CHOI ; Young Hyun YOU ; Yeon Sik CHOO ; In Jung LEE ; Jae Ho SHIN ; Hyeokjun YOON ; Jong Guk KIM
Mycobiology 2015;43(4):373-383
Five halophytic plant species, Suaeda maritima, Limonium tetragonum, Suaeda australis, Phragmites australis, and Suaeda glauca Bunge, which are native to the Muan salt marsh of South Korea, were examined for fungal endophytes by sequencing the internal transcribed spacer (ITS) region containing ITS1, 5.8S rRNA, and ITS2. In total, 160 endophytic fungal strains were isolated and identified from the roots of the 5 plant species. Taxonomically, all 160 strains belonged to the phyla Ascomycota, Basidiomycota, and Zygomycota. The most dominant genus was Fusarium, followed by the genera Penicillium and Alternaria. Subsequently, using 5 statistical methods, the diversity indices of the endophytes were determined at genus level. Among these halophytic plants, P. australis was found to host the greatest diversity of endophytic fungi. Culture filtrates of endophytic fungi were treated to Waito-C rice seedlings for plant growth-promoting effects. The fungal strain Su-3-4-3 isolated from S. glauca Bunge provide the maximum plant length (20.1 cm) in comparison with wild-type Gibberella fujikuroi (19.6 cm). Consequently, chromatographic analysis of the culture filtrate of Su-3-4-3 showed the presence of physiologically active gibberellins, GA(1) (0.465 ng/mL), GA(3) (1.808 ng/mL) along with other physiologically inactive GA(9) (0.054 ng/mL) and GA(24) (0.044 ng/mL). The fungal isolate Su-3-4-3 was identified as Talaromyces pinophilus.
Alternaria
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Ascomycota
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Basidiomycota
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Chenopodiaceae
;
Endophytes
;
Fungi*
;
Fusarium
;
Genetic Variation
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Gibberella
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Gibberellins
;
Korea*
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Penicillium
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Plants*
;
Plumbaginaceae
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Salt-Tolerant Plants*
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Seedlings
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Talaromyces
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Wetlands