1.New opportunities and challenges for hybrid data and model driven bioprocess optimization and scale-up.
Guan WANG ; Xiwei TIAN ; Jianye XIA ; Ju CHU ; Siliang ZHANG ; Yingping ZHUANG
Chinese Journal of Biotechnology 2021;37(3):1004-1016
Currently, biomanufacturing technology and industry are receiving worldwide attention. However, there are still great challenges on bioprocess optimization and scale-up, including: lacing the process detection methods, which makes it difficult to meet the requirement of monitoring of key indicators and parameters; poor understanding of cell metabolism, which arouses problems to rationally achieve process optimization and regulation; the reactor environment is very different across the scales, resulting in low efficiency of stepwise scale-up. Considering the above key issues that need to be resolved, here we summarize the key technological innovations of the whole chain of fermentation process, i.e., real-time detection-dynamic regulation-rational scale-up, through case analysis. In the future, bioprocess design will be guided by a full lifecycle in-silico model integrating cellular physiology (spatiotemporal multiscale metabolic models) and fluid dynamics (CFD models). This will promote computer-aided design and development, accelerate the realization of large-scale intelligent production and serve to open a new era of green biomanufacturing.
Bioreactors
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Computer Simulation
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Fermentation
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Hydrodynamics
2.Simulation and Damage Analysis of an Accidental Jet Fire in a High-Pressure Compressed Pump Shelter.
Chang Bong JANG ; Sang Won CHOI
Safety and Health at Work 2017;8(1):42-48
BACKGROUND: As one of the most frequently occurring accidents in a chemical plant, a fire accident may occur at any place where transfer or handling of combustible materials is routinely performed. METHODS: In particular, a jet fire incident in a chemical plant operated under high pressure may bring severe damage. To review this event numerically, Computational Fluid Dynamics methodology was used to simulate a jet fire at a pipe of a compressor under high pressure. RESULTS: For jet fire simulation, the Kemeleon FireEx Code was used, and results of this simulation showed that a structure and installations located within the shelter of a compressor received serious damage. CONCLUSION: The results confirmed that a jet fire may create a domino effect that could cause an accident aside from the secondary chemical accident.
Chemical Hazard Release
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Fires*
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Hydrodynamics
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Plants
3.Hemodynamic Measurement Using Four-Dimensional Phase-Contrast MRI: Quantification of Hemodynamic Parameters and Clinical Applications.
Hojin HA ; Guk Bae KIM ; Jihoon KWEON ; Sang Joon LEE ; Young Hak KIM ; Deok Hee LEE ; Dong Hyun YANG ; Namkug KIM
Korean Journal of Radiology 2016;17(4):445-462
Recent improvements have been made to the use of time-resolved, three-dimensional phase-contrast (PC) magnetic resonance imaging (MRI), which is also named four-dimensional (4D) PC-MRI or 4D flow MRI, in the investigation of spatial and temporal variations in hemodynamic features in cardiovascular blood flow. The present article reviews the principle and analytical procedures of 4D PC-MRI. Various fluid dynamic biomarkers for possible clinical usage are also described, including wall shear stress, turbulent kinetic energy, and relative pressure. Lastly, this article provides an overview of the clinical applications of 4D PC-MRI in various cardiovascular regions.
Biomarkers
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Hemodynamics*
;
Hydrodynamics
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Magnetic Resonance Imaging*
4.Considerations of Blood Properties, Outlet Boundary Conditions and Energy Loss Approaches in Computational Fluid Dynamics Modeling.
Ji Young MOON ; Dae Chul SUH ; Yong Sang LEE ; Young Woo KIM ; Joon Sang LEE
Neurointervention 2014;9(1):1-8
Despite recent development of computational fluid dynamics (CFD) research, analysis of computational fluid dynamics of cerebral vessels has several limitations. Although blood is a non-Newtonian fluid, velocity and pressure fields were computed under the assumptions of incompressible, laminar, steady-state flows and Newtonian fluid dynamics. The pulsatile nature of blood flow is not properly applied in inlet and outlet boundaries. Therefore, we present these technical limitations and discuss the possible solution by comparing the theoretical and computational studies.
Bays
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Cerebral Arteries
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Computer Simulation
;
Hydrodynamics*
5.Computational Fluid Dynamics of Intracranial and Extracranal Arteries using 3-Dimensional Angiography: Technical Considerations with Physician's Point of View.
Sung Tae PARK ; Kyunghwan YOON ; Young Bae KO ; Dae Chul SUH
Neurointervention 2013;8(2):92-100
We investigate the potentials and limitations of computational fluid dynamics (CFD) analysis of patient specific models from 3D angiographies. There are many technical problems in acquisition of proper vascular models, in pre-processing for making 2D surface and 3D volume meshes and also in post-processing steps for display the CFD analysis. We hope that our study could serves as a technical reference to validating other tools and CFD results.
Angiography
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Arteries
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Carotid Arteries
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Hemodynamics
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Humans
;
Hydrodynamics
6.Wall Shear Stress and Flow Patterns in Unruptured and Ruptured Anterior Communicating Artery Aneurysms Using Computational Fluid Dynamics
Ui Yun LEE ; Jinmu JUNG ; Hyo Sung KWAK ; Dong Hwan LEE ; Gyung Ho CHUNG ; Jung Soo PARK ; Eun Jeong KOH
Journal of Korean Neurosurgical Society 2018;61(6):689-699
OBJECTIVE: The goal of this study was to compare several parameters, including wall shear stress (WSS) and flow pattern, between unruptured and ruptured anterior communicating artery (ACoA) aneurysms using patient-specific aneurysm geometry.METHODS: In total, 18 unruptured and 24 ruptured aneurysms were analyzed using computational fluid dynamics (CFD) models. Minimal, average, and maximal wall shear stress were calculated based on CFD simulations. Aneurysm height, ostium diameter, aspect ratio, and area of aneurysm were measured. Aneurysms were classified according to flow complexity (simple or complex) and inflow jet (concentrated or diffused). Statistical analyses were performed to ascertain differences between the aneurysm groups.RESULTS: Average wall shear stress of the ruptured group was greater than that of the unruptured group (9.42% for aneurysm and 10.38% for ostium). The average area of ruptured aneurysms was 31.22% larger than unruptured aneurysms. Simple flow was observed in 14 of 18 (78%) unruptured aneurysms, while all ruptured aneurysms had complex flow (p < 0.001). Ruptured aneurysms were more likely to have a concentrated inflow jet (63%), while unruptured aneurysms predominantly had a diffused inflow jet (83%, p=0.004).CONCLUSION: Ruptured aneurysms tended to have a larger geometric size and greater WSS compared to unruptured aneurysms, but the difference was not statistically significant. Flow complexity and inflow jet were significantly different between unruptured and ruptured ACoA aneurysms.
Aneurysm
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Aneurysm, Ruptured
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Arteries
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Hydrodynamics
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Intracranial Aneurysm
8.Dynamic Model of the Aqueous Humor Circulation with Application to Simulation of the Treatment for Primary Open Angle Glaucoma.
Ying JU ; Boliang WANG ; Jiezhen XIE ; Liwei HUANG ; Shaohui HUANG ; Xiaoyang HUANG
Journal of Korean Society of Medical Informatics 2007;13(2):139-146
OBJECTIVE: In order to study the mechanism of the aqueous humor circulation and its relationship to the glaucoma macroscopically with engineering methods. METHODS: A dynamistic model was presented, which can be used to simulate the situation and the treatment of the primary open angle glaucoma (POAG). The frame of the model was built based on the ophthalmically accepted feedback mechanism between the aqueous humor circulation and the intraocular pressure (IOP). The transfer functions and the parameters were educed from the analysis of physiological theories, the basic elements of hydrodynamics, and the clinical parameters. The relation between the parameters of the system and the episode mechanism of POAG was discussed. A digital method was used to simulate the Challenge test and some medicines' treatment of POAG, and the results were consistent with clinical observations. RESULTS: The results of simulation illuminate that the model can simulate the mechanism of the aqueous humor circulation and the curative mechanism of some medicines under the physiological condition and the pathological condition of the POAG. CONCLUSION: A few parameters which can hardly be captured with clinical method could be obtained from the model. These parameters can be helpful for the diagnosis and prediction of the curative effect.
Aqueous Humor*
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Diagnosis
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Glaucoma
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Glaucoma, Open-Angle*
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Hydrodynamics
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Intraocular Pressure
9.Hemodynamic effects of stenting on wide-necked intracranial aneurysms.
Yi-sen ZHANG ; Xin-jian YANG ; Sheng-zhang WANG ; Ai-ke QIAO ; Jia-liang CHEN ; Kun-ya ZHANG ; Zhi-cheng LIU ; Yu-jing ZHAO ; Ying ZHANG ; Bin LUO ; Chuan-hui LI
Chinese Medical Journal 2010;123(15):1999-2003
BACKGROUNDStent placement has been widely used to assist coiling in cerebral aneurysm treatments. The present study aimed to investigate the hemodynamic effects of stenting on wide-necked intracranial aneurysms.
METHODSThree idealized plexiglass aneurismal models with different geometries before and after stenting were created, and their three-dimensional computational models were constructed. Flow dynamics in stented and unstented aneurismal models were studied using in vitro flow visualization and computational fluid dynamics (CFD) simulations. In addition, effects of stenting on flow dynamics in a patient-specific aneurysm model were also analyzed by CFD.
RESULTSThe results of flow visualization were consistent with those obtained with CFD simulations. Stent deployment reduced vortex inside the aneurysm and its impact on the aneurysm sac, and decreased wall shear stress on the sac. Different aneurysm geometries dictated fundamentally different hemodynamic patterns and outcomes of stenting.
CONCLUSIONSStenting across the neck of aneurysms improves local blood flow profiles. This may facilitate thrombus formation in aneurysms and decrease the chance of recanalization.
Embolization, Therapeutic ; methods ; Humans ; Hydrodynamics ; Intracranial Aneurysm ; therapy ; Stents
10.Hydrocephalus Developed after Cranioplasty: Influence of Cranioplasty on the CSF Circulation.
Seok Won KIM ; Seung Myung LEE ; Ho SHIN
Journal of Korean Neurosurgical Society 2006;40(3):193-195
Hydrocephalus is usually defined as the condition of ventricular dilatation due to the overproduction of cerebrospinal fluid(CSF) or dysfunction of absorption. The pattern of the CSF circulation may change after a cranioplasty secondary to previous decompressive craniectomy for refractory intracranial hypertension after head injury. The effect of the cranioplasty on CSF hydrodynamics has not been explored exactly. We report two cases of acute hydrocephalus developed after cranioplasty and discuss about the clinical importance with review of literatures.
Absorption
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Craniocerebral Trauma
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Decompressive Craniectomy
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Dilatation
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Hydrocephalus*
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Hydrodynamics
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Intracranial Hypertension