1.Sequence analysis of the complete genome of bocavirus WLL-1.
Feng LIN ; Ai-Ping ZENG ; En YANG ; Hai-Yan LIN ; Chang-Hua ZHENG ; Hong CHEN ; Huai LI ; Xu-Yang LI ; Ming-Sul YU ; Ning-Min YANG ; Da-Zhi JIN ; Guang-Chuang YU ; Xiao-Chen BO ; Si-Yuan WEN ; Sheng-Qi WANG
Chinese Journal of Virology 2007;23(1):57-59
Human bocavirus, which was firstly discovered in 2005, is a new human parvovirus associated with lower respiratory tract infection in children. In this study, a human bocavirus, named WLL-1 isolate, was identified in Wenlin County, Zhejiang Province. The genome of bocavirus WLL-1 has been sequenced and analyzed. Phylogenetic analyses showed that WLL-1 shares 99% homology with other bocaviruses recently reported, but also has some special variations.
Bocavirus
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classification
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genetics
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isolation & purification
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China
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DNA, Viral
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chemistry
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genetics
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Genome, Viral
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Humans
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Molecular Sequence Data
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Phylogeny
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Sequence Analysis, DNA
2.Effects of blood serum from rats with combined radiation-thermal injury on the bone marrow hematopoietic progenitor cells growth.
Xin-Ze RAN ; Yong-Ping SU ; Huai-En ZHENG ; Chao-Hua GUO ; Du-Hu LIU ; Yan-Hong ZHOU ; Xiao-Hong LIU ; Guo-Ping AI
Journal of Experimental Hematology 2005;13(1):121-125
To observe the effects of blood serum from rats with radiation injury, thermal injury and combined radiation-thermal lesions on growth of hematopoietic progenitor cells and the change of their serum cytokine levels, total body irradiation of rats was performed with 12 Gy gamma ray from a (60)Co source, and 30% total body surface area III degree thermal lesion on the back was inflicted with a 5 kW bromotungsten lamp. The blood serum from these animals was collected at 3, 12, 24, 48, 72 and 96 hours after injury. Then the blood serum was added to the culture medium of erythrocyte progenitor cells (CFU-E, BFU-E) or granulocyte-macrophage progenitor cells (CFU-GM) at final concentration of 10 microg/ml. The results showed that the colony number of CFU-E, BFU-E and CFU-GM formed after addition of the blood serum from rats with thermal or combined radiation-thermal injury was significantly higher than that from normal rats at 3, 12, 24, 48, 72 and 96 hours after injury and reached its peak value at 24 hours after injury (342.8, 261.6 and 228.4% respectively from burned rats, 252.4, 205.1 and 174.2% respectively from rats with combined radiation-thermal injury as compared with that of normal rats). However, a few CFU-E, BFU-E or CFU-GM formation was found after addition of the blood serum from irradiated rats. At the same time, the level of TNF alpha and IL-6 in serum of burn group and combined radiation-thermal injury group was markedly higher than that of normal group, even more higher than that of irradiation injury group (P < 0.01). It is concluded that the blood serum from rats with thermal lesion or combined radiation-thermal injury improves the growth of erythrocyte and granulocyte progenitor cells. On the contrary, the blood serum from the irradiated rats shows the inhibiting effects, definitely related to their serum cytokines changes.
Animals
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Burns
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blood
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Cell Proliferation
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drug effects
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Cells, Cultured
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Culture Media
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chemistry
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pharmacology
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Hematopoietic Stem Cells
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cytology
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drug effects
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Male
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Mice
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Multiple Trauma
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blood
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Radiation Injuries
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blood
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Rats
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Rats, Wistar
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Serum
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chemistry
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Time Factors
3.Surveillance on severe acute respiratory syndrome associated coronavirus in animals at a live animal market of Guangzhou in 2004.
Ming WANG ; Huai-qi JING ; Hui-fang XU ; Xiu-gao JIANG ; Biao KAN ; Qi-yong LIU ; Kang-lin WAN ; Bu-yun CUI ; Han ZHENG ; Zhi-gang CUI ; Mei-ying YAN ; Wei-li LIANG ; Hong-xia WANG ; Xiao-bao QI ; Zhen-jun LI ; Ma-chao LI ; Kai CHEN ; En-min ZHANG ; Shou-yin ZHANG ; Rong HAI ; Dong-zheng YU ; Jian-guo XU
Chinese Journal of Epidemiology 2005;26(2):84-87
OBJECTIVETo study the prevalence of severe acute respiratory syndrome coronavirus (SARS-CoV) like virus in animals at a live animal market of Guanzhou in 2004 before and after culling of wild animal action taken by the local authority, in order to predict the re-emerging of SARS from animal originals in this region.
METHODSAnimals at live animal market were sampled for rectal and throat swabs in triplicate. A single step realtime reverse transcription-polymerase chain reaction (RT-PCR) diagnostic kit was performed for screening SARS-CoV like virus, the manual nested RT- PCR and DNA sequencing were performed for confirmation. Only specimens which tested positive for both of the N and P genes by nested RT-PCR were scored as positive.
RESULTSIn 31 animals sampled in January 5 2004 before culling of wild animals at Guangdong Province, including 20 cats (Felis catus), 5 red fox (Vulpes vulpes) and 6 Lesser rice field rats (Rattus losea), 8 (25.8%) animals were tested positive for SARS-CoV like virus by RT-PCR methods, of which 4 cats, 3 red fox and one Lesser rice field rats were included. However, two weeks after culling of animals and disinfection of the market were implemented, in 119 animals sampled in January 20 2004, including 6 rabbits (Oryctolagus cuniculus), 13 cats, 46 red jungle fowl (Gallus gallus), 13 spotbill duck (Anas platyrhynchos), 10 greylag goose (Anser anser), 31 Chinese francolin (Franclinus pintadeanus), only rectal swab from one greylag goose was tested positive for SARS-CoV like virus. Furthermore, in 102 animals that including 14 greylag gooses, 3 cats, 5 rabbits, 9 spotbill duck (Anaspoecilorhyncha), 2 Chinese francolin (Franclinus pintadeanus), 8 common pheasant (Phasianus colchicus), 6 pigeons, 9 Chinese muntjac (Muntiacus reevesi), 19 wild boar (Sus scrofa), 16 Lesser rice field rats, 5 dogs, 1 mink (Mustela vison), 3 goats, 2 green peafowl (Pavo muticus) sampled in April, May, June, July, August and November, only rectal swab from one pig was tested positive. However, of 12 and 10 palm civets sampled in November and December including five of which had been at the live animals market for 2 days, none of them was tested positive.
CONCLUSIONThis findings revealed that animals being sampled in April, May, June, July, August and November of 2004, only one rectal swab from a pig was tested positive as SARS-CoV like virus, much lower than the results from the previous year, suggesting that the possibility of re-emerging of human infection from animal origins is low for the winter of 2004-2005.
Animals ; Animals, Wild ; virology ; China ; DNA, Viral ; analysis ; Felidae ; virology ; Reverse Transcriptase Polymerase Chain Reaction ; SARS Virus ; isolation & purification