1.Identification bacteria associated with Haliclona sp. sponges from Enggano Island, Indonesia with antimicrobial activity against human pathogens
Sipriyadi ; Uci Cahlia ; Welly Darwis ; Risky Hadi Wibowo ; Enny Nugraheni ; Mardhatillah Sariyanti
Malaysian Journal of Microbiology 2021;17(2):178-189
Aims:
Antimicrobial compounds are bioactive compounds that have ability to inhibit microbial growth activities. This
study aimed to screen and identify bacteria associated with Haliclona sp. sponges from Enggano Island, Indonesia that
had potential to produce antimicrobial compounds against Escherichia coli, Candida albicans and Staphylococcus
epidermidis.
Methodology and results:
The method used to screen and identify bacteria in this study including screening assay,
morphological identification, Gram staining and spore staining method, biochemical tests and molecular identification
based on 16S rRNA gene. This study resulted 16 isolates which were successfully isolated from Haliclona sp. According
to screening assay, 5 isolates could potentially produce antimicrobial compounds coded as HEBS1, HEBS3, HEBS6,
HEBB2 and HEBB3. Based on Gram staining, spore staining, biochemical test and molecular identification results,
HEBS1 had proximity to Brachybacterium paraconglomeratum, HEBS3 had proximity to Kocuria palustris, HEBS6 had
proximity to Psychrobacter pasificensis, HEBB2 had proximity to Bacillus aryabhattai, and HEBB3 had proximity to
Bacillus toyonensis.
Conclusion, significance and impact of study
From 16 isolates that successfully isolated, there were 5 isolates that
could potentially produce antimicrobial compounds against Escherichia coli, Staphylococcus epidermidis and Candida
albicans. These isolates can be served as antimicrobial compounds producer. However, identification and purification of
these antimicrobial compounds are needed to be done before applied it for medicine in the future.
Haliclona--microbiology
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Host-Pathogen Interactions
2.Progress on host range factors and their mechanisms of poxvirus.
Gang BAI ; Huai-Jie JIA ; Xiao-Bing HE ; Zhi-Zhong JING
Chinese Journal of Virology 2013;29(6):655-661
Poxvirus is one of the most serious zoonosis pathogens, which has largest genome and broadest host spectrum. With the development of molecular biology, functional genomics, and immunology-related technology, the interactions between pathogen and the host, particularly a large array of host range factors and their functions have been increasingly discovered. These findings provide references for the molecular basis of poxvirus tissue tropism and host specificity. This review focus on the introduction of host range factors in major members of Chordopoxvirinae to highlight the understanding of the mechanisms of molecular genetic evolution, the host tropism, and cross-species infection of poxviruses.
Animals
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Host Specificity
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Host-Pathogen Interactions
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Humans
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Poxviridae
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classification
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genetics
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isolation & purification
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physiology
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Poxviridae Infections
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veterinary
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virology
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Viral Proteins
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genetics
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metabolism
3.Innate immune response to oral bacteria and the immune evasive characteristics of periodontal pathogens.
Journal of Periodontal & Implant Science 2013;43(1):3-11
Periodontitis is a chronic inflammation of periodontal tissue caused by subgingival plaque-associated bacteria. Periodontitis has long been understood to be the result of an excessive host response to plaque bacteria. In addition, periodontal pathogens have been regarded as the causative agents that induce a hyperinflammatory response from the host. In this brief review, host-microbe interaction of nonperiodontopathic versus periodontopathic bacteria with innate immune components encountered in the gingival sulcus will be described. In particular, we will describe the susceptibility of these microbes to antimicrobial peptides (AMPs) and phagocytosis by neutrophils, the induction of tissue-destructive mediators from neutrophils, the induction of AMPs and interleukin (IL)-8 from gingival epithelial cells, and the pattern recognition receptors that mediate the regulation of AMPs and IL-8 in gingival epithelial cells. This review indicates that true periodontal pathogens are poor activators/suppressors of a host immune response, and they evade host defense mechanisms.
Bacteria
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Defense Mechanisms
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Epithelial Cells
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Host-Pathogen Interactions
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Immune Evasion
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Immunity, Innate
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Inflammation
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Interleukin-8
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Interleukins
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Neutrophils
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Peptides
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Periodontitis
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Phagocytosis
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Receptors, Pattern Recognition
4.A dynamically evolving war between autophagy and pathogenic microorganisms.
Qianqian ZHENG ; Liangwei DUAN ; Yang ZHANG ; Jiaoyang LI ; Shiyu ZHANG ; Hui WANG
Journal of Zhejiang University. Science. B 2022;23(1):19-41
Autophagy is an intracellular degradation process that maintains cellular homeostasis. It is essential for protecting organisms from environmental stress. Autophagy can help the host to eliminate invading pathogens, including bacteria, viruses, fungi, and parasites. However, pathogens have evolved multiple strategies to interfere with autophagic signaling pathways or inhibit the fusion of autophagosomes with lysosomes to form autolysosomes. Moreover, host cell matrix degradation by different types of autophagy can be used for the proliferation and reproduction of pathogens. Thus, determining the roles and mechanisms of autophagy during pathogen infections will promote understanding of the mechanisms of pathogen‒host interactions and provide new strategies for the treatment of infectious diseases.
Autophagy
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Bacteria
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Host-Pathogen Interactions
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Lysosomes
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Signal Transduction
5.Microbes and host dance in harmony or disarray?
Protein & Cell 2018;9(5):395-396
6.Effects of different fungi on symbiotic seed germination of two Dendrobium species.
China Journal of Chinese Materia Medica 2014;39(17):3238-3244
The epiphytic orchid, Dendrobium aphyllum and D. devonianum are used as traditional Chinese medicine, and became locally endangered in recent years because of over-collection. We test the effect of inoculations of endophytic fungi FDaI7 (Tulasnella sp.), FDd1 (Epulorhiza sp. ) and FCb4 (Epulorhiza sp.), which isolated from D. aphyllum, D. denonianum and Cymbidium mannii, respectively, on artificial substrate in these two Dendrobium species. In the symbiotic germination experiment, FDaI7 and FDd1 were effective for protocorm formation and seedling development of D. aphyllum and D. denonianum separately. After 60 days, 14.46% of the D. aphyllum seeds grown to protocorms and 12.07% developed to seedlings inoculated only with FDaI7, while contrasted with 0 when inoculated the other two isolates and non-inoculation treatment. However, in D. denonianum, seeds only grown to protocorms and developed to seedlings when inoculated with FDd1, the percentages were 44.36% and 42.91% distinguishingly. High specificity was shown in symbiotic germination on artificial substrate of Dendrobium. Protocorms could further develop to seedlings within or without light when inoculated the compatible fungi. However, light condition (12/12 h Light/Dark) produced the normal seedlings, while dark condition (0/24 h L/D) produced the abnormal seedlings. These may suggest that the development of young seedlings require light based on the effective symbiotic fungi. These findings will aid in seedling production of simulation-forestry ecology cultivation, conservation and reintroduction of Dendrobium.
Basidiomycota
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classification
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physiology
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Darkness
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Dendrobium
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classification
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growth & development
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microbiology
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Germination
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Host-Pathogen Interactions
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Light
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Plants, Medicinal
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classification
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growth & development
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microbiology
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Seedlings
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growth & development
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microbiology
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radiation effects
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Seeds
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growth & development
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microbiology
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Species Specificity
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Symbiosis
7.Viral miRNA: dancing for commensalism?.
Yuan DONG ; Chao QIU ; Jian-Qing XU
Chinese Journal of Virology 2011;27(6):624-628
8.Expression patterns of influenza virus receptors in the respiratory tracts of four species of poultry.
Ji Eun YU ; Hakyoung YOON ; Hyun Jeong LEE ; Jong Hwan LEE ; Byung Joon CHANG ; Chang Seon SONG ; Sang Soep NAHM
Journal of Veterinary Science 2011;12(1):7-13
The primary determinant of influenza virus infectivity is the type of linkage between sialic acid and oligosaccharides on the host cells. Hemagglutinin of avian influenza viruses preferentially binds to sialic acids linked to galactose by an alpha-2,3 linkage whereas hemagglutinin of human influenza viruses binds to sialic acids with an alpha-2,6 linkage. The distribution patterns of influenza receptors in the avian respiratory tracts are of particular interest because these are important for initial viral attachment, replication, and transmission to other species. In this study, we examined the distribution patterns of influenza receptors in the respiratory tract of chickens, ducks, pheasants, and quails because these species have been known to act as intermediate hosts in interspecies transmission. Lectin histochemistry was performed to detect receptor-bearing cells. Cell-specific distribution of the receptors was determined and expression densities were compared. We observed species-, site-, and cell-specific variations in receptor expression. In general, receptor expression was the highest in quails and lowest in ducks. Pheasants and quails had abundant expression of both types of receptors throughout the respiratory tract. These results indicate that pheasants and quails may play important roles as intermediate hosts for the generation of influenza viruses with pandemic potential.
Animals
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Cell Membrane/metabolism/virology
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Hemagglutinin Glycoproteins, Influenza Virus/metabolism
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Host-Pathogen Interactions
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Influenza A virus/*metabolism
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Influenza in Birds/metabolism/transmission
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Lectins/metabolism
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Poultry/metabolism/*virology
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Poultry Diseases/metabolism
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Receptors, Cell Surface/analysis/chemistry/metabolism
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Receptors, Virus/*analysis/metabolism
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Respiratory System/*chemistry
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Sialic Acids/metabolism
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Species Specificity
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Specific Pathogen-Free Organisms
9.Immunomodulatory Roles of PE/PPE Proteins and Their Implications in Genomic Features of Mycobacterium tuberculosis.
Soo Young CHOI ; Sung Jae SHIN
Journal of Bacteriology and Virology 2015;45(3):272-281
Tuberculosis, caused by Mycobacterium tuberculosis (Mtb), remains a notorious cause of human death worldwide. A deeper understanding of the proline-glutamate (PE) and proline-proline-glutamate (PPE) families, which compromise 10% of the coding regions in the Mtb genome, has uncovered their unique roles in host-pathogen interactions. Further, comparative genomic analysis of different Mtb strains has proposed that Mtb has acquired diverse gene sets that play immunomodulatory roles in host-pathogen interactions. This review delineates the various immunomodulatory roles of PE/PPE antigens and discusses their implications in the development of the improved diagnostic tools and vaccines.
Clinical Coding
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Genome
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Host-Pathogen Interactions
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Humans
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Immunomodulation
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Mycobacterium tuberculosis*
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Mycobacterium*
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Tuberculosis
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Vaccines
10.Host immune responses to mycobacterial antigens and their implications for the development of a vaccine to control tuberculosis.
Clinical and Experimental Vaccine Research 2014;3(2):155-167
Tuberculosis (TB) remains a worldwide health problem, causing around 2 million deaths per year. Despite the bacillus Calmette Guerin vaccine being available for more than 80 years, it has limited effectiveness in preventing TB, with inconsistent results in trials. This highlights the urgent need to develop an improved TB vaccine, based on a better understanding of host-pathogen interactions and immune responses during mycobacterial infection. Recent studies have revealed a potential role for autophagy, an intracellular homeostatic process, in vaccine development against TB, through enhanced immune activation. This review attempts to understand the host innate immune responses induced by a variety of protein antigens from Mycobacterium tuberculosis, and to identify future vaccine candidates against TB. We focus on recent advances in vaccine development strategies, through identification of new TB antigens using a variety of innovative tools. A new understanding of the host-pathogen relationship, and the usefulness of mycobacterial antigens as novel vaccine candidates, will contribute to the design of the next generation of vaccines, and to improving the host protective immune responses while limiting immunopathology during M. tuberculosis infection.
Autophagy
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BCG Vaccine
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Host-Pathogen Interactions
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Immunity, Innate
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Mycobacterium tuberculosis
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Tuberculosis*
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Vaccines