1.Genetic Polymorphism of the Serum Proteins of Horses in Jeju.
Jin Ah SHIN ; Young Hoon YANG ; Hee Seok KIM ; Young Min YUN ; Kyoung Kap LEE
Journal of Veterinary Science 2002;3(4):255-263
The study was carried out to investigate the genetic polymorphism of the serum proteins of horses in Cheju. They were assigned to three groups; 45 Cheju native horses(CNH), 60 Cheju racing horses(CRH) and 60 Thoroughbreds(TB). We analyzed the phenotypes and gene frequencies of serum proteins which were albumin (Alb), vitamin-D binding protein(GC), esterase (ES), A1B glycoprotein(A1B) and transferrin(TF) loci using horizontal polyacrylamide gel electrophoresis (HPAGE).All of the loci, except A1B in TB, showed polymorphisms and different allelic and phenotypic frequencies in all three groups. ESS and TFF1 were not observed in CNH. Allelic frequencies of AlbB, ESI, TFD and TFF1 were high in TB. All of the loci, except ES locus in CRH, appeared to be in a state of Hardy-Weinberg equilibrium from goodness-of-fit test in all three groups Heterozygosity estimates at Alb, ES and TF loci were high, but GC and A1B loci were low in all three groups. Average heterozygosities in CNH, CRH and TB were 0.3535, 0.3555 and 0.2726, respectively. Results showed differences in the frequencies of alleles and phenotypes of several serum protein loci between CNH and CRH, suggested that CRH might be crossed with other breeds of horses in some degree.
Alleles
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Animals
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Blood Proteins/*genetics
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Electrophoresis, Polyacrylamide Gel
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Esterases/genetics
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Genetic Variation
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Horses/blood/*genetics
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Polymorphism, Genetic
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Serum Albumin/genetics
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Transferrin/genetics
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Vitamin D-Binding Protein/genetics
2.Research on the identification of penis et testis cervi with molecular taxonomy.
Shuang-yan TANG ; Wen FU ; Yong-jiu CHEN ; Jian-yun WANG ; Xu JIANG ; Ya-ping ZHANG
China Journal of Chinese Materia Medica 2002;27(8):573-575
OBJECTIVETo make the kit with witch to identify Penis et Testis Cervi with molecular taxonomy.
METHODThe mtDNA of sika and red deer from different areas was amplified by PCR and sequenced. Compared with the mtDNA of bovine and horse from witch the false medicines were made, characteristic segments of deer were found. We selected one as the species distinctive PCR primer of deer.
RESULTThe kit made up with this primer and related reagents could be used to discern Penis et Testis Cervi from the false medicine.
CONCLUSIONIt is a scientific, steady, accurate and convenient way to identify Penis et Testis Cervi with molecular taxonomy.
Animals ; Cattle ; genetics ; DNA ; genetics ; DNA Primers ; DNA, Mitochondrial ; genetics ; Deer ; classification ; genetics ; Drug Contamination ; Horses ; genetics ; Male ; Materia Medica ; chemistry ; Penis ; chemistry ; Testis ; chemistry
3.Molecular biological progression of equine arteritis virus.
Chinese Journal of Virology 2008;24(5):404-408
4.Parentage testing of Thoroughbred horse in Korea using microsatellite DNA typing.
Journal of Veterinary Science 2006;7(1):63-67
The present study was to construct a parentage testing system for Thoroughbred (TB) horse. A total number of 1,285 TB horse samples including 962 foals for parentage testing, 9 sires and 314 dams for individual identification were genotyped. Genomic DNA was extracted from 5 hair roots and genotyped by using 14 microsatellite markers (AHT4, AHT5, ASB2, ASB17, ASB23, CA425, HMS1, HMS3, HMS6, HMS7, HTG4, HTG10, LEX3 and VHL20). This method consisted of multiplexing PCR procedure and showed reasonable amplification of all PCR products. Genotypes were determined by genetic analyzer. The number of alleles per locus varied from 3 to 9 with a mean value of 6.36 in TB horse. The expected heterozygosity was ranged from 0.548 to 0.831 (mean 0.699), and the total exclusion probability of 14 microstellite loci was 0.9998. Of the 14 markers, ASB2, ASB17, ASB23, HMS7 and HTG10 loci have relatively high PIC value (> 0.7). Of the 962 foals, 960 foals were qualified by compatibility according to the Mendelism. These results suggest that the DNA typing method has high potential for parentage verification and individual identification of TB horses.
Alleles
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Animals
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DNA/chemistry/genetics
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DNA Fingerprinting/methods/*veterinary
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Female
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Genotype
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Horses/*genetics
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Korea
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Male
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Microsatellite Repeats/genetics
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Pedigree
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Polymerase Chain Reaction/veterinary
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Polymorphism, Genetic
5.Functional annotation from the genome sequence of the giant panda.
Tong HUO ; Yinjie ZHANG ; Jianping LIN
Protein & Cell 2012;3(8):602-608
The giant panda is one of the most critically endangered species due to the fragmentation and loss of its habitat. Studying the functions of proteins in this animal, especially specific trait-related proteins, is therefore necessary to protect the species. In this work, the functions of these proteins were investigated using the genome sequence of the giant panda. Data on 21,001 proteins and their functions were stored in the Giant Panda Protein Database, in which the proteins were divided into two groups: 20,179 proteins whose functions can be predicted by GeneScan formed the known-function group, whereas 822 proteins whose functions cannot be predicted by GeneScan comprised the unknown-function group. For the known-function group, we further classified the proteins by molecular function, biological process, cellular component, and tissue specificity. For the unknown-function group, we developed a strategy in which the proteins were filtered by cross-Blast to identify panda-specific proteins under the assumption that proteins related to the panda-specific traits in the unknown-function group exist. After this filtering procedure, we identified 32 proteins (2 of which are membrane proteins) specific to the giant panda genome as compared against the dog and horse genomes. Based on their amino acid sequences, these 32 proteins were further analyzed by functional classification using SVM-Prot, motif prediction using MyHits, and interacting protein prediction using the Database of Interacting Proteins. Nineteen proteins were predicted to be zinc-binding proteins, thus affecting the activities of nucleic acids. The 32 panda-specific proteins will be further investigated by structural and functional analysis.
Amino Acid Sequence
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Animals
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Chromosome Mapping
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Databases, Protein
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Dogs
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genetics
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Genome
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Horses
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genetics
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Molecular Sequence Data
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Protein Interaction Mapping
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Proteomics
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Sequence Alignment
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Software
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Ursidae
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genetics
6.Determination of angiotensin I-converting enzyme activity in equine blood: lack of agreement between methods of analysis.
Maria Fernanda de M COSTA ; Adriana K CARMONA ; Marcio F M ALVES ; Timothy M RYAN ; Helen M DAVIES ; Garry A ANDERSON ; Ron F SLOCOMBE
Journal of Veterinary Science 2011;12(1):21-25
Angiotensin-I converting enzyme (ACE) is a key regulator of blood pressure, electrolytes and fluid homeostasis through conversion of angiotensin I into angiotensin II. Recently, a genetic polymorphism of the ACE gene, which accounts for 47% of the variation of ACE activity in blood, has been advocated as a biomarker of athletic aptitude. Different methods of analysis and determination of ACE activity in plasma have been used in human and equine research without a consensus of a "gold standard" method. Different methods have often been used interchangeably or cited as being comparable in the existing literature; however, the actual agreement between assays has not been investigated. Therefore, in this study, we evaluated the level of agreement between three different assays using equine plasma obtained from 29 horses. Two spectrophotometric assays using Furylacryloyl-phenylalanyl-glycyl-glycine as substrate and one fluorimetric assay utilizing o-aminobenzoic acid-FRK-(Dnp)P-OH were employed. The results revealed that the measurements from the different assays were not in agreement, indicating that the methods should not be used interchangeably for measurement of equine ACE activity. Rather, a single method of analysis should be adopted to achieve comparable results and critical appraisal of the literature is needed when attempting to compare results obtained from different assays.
Animals
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Enzyme Assays/*methods
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Female
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Fluorometry/*methods
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Horses/blood/genetics/*metabolism
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Male
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Oligopeptides/pharmacology
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Peptidyl-Dipeptidase A/blood/genetics/*metabolism
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Polymorphism, Genetic
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Reference Values
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Spectrophotometry/*methods
7.The production and distribution of IL-6 and TNF-alpha in subcutaneous adipose tissue and their correlation with serum concentrations in Welsh ponies with equine metabolic syndrome.
Katarzyna BASINSKA ; Krzysztof MARYCZ ; Agnieszka SMIESZEK ; Jakub NICPON
Journal of Veterinary Science 2015;16(1):113-120
A main symptom of equine metabolic syndrome (EMS) in ponies is pathological obesity characterized by abnormal accumulation of fat deposits and inflammation. In this study, we analyzed the expression of two pro-inflammatory cytokines, interleukin-6 (IL-6) and tumor necrosis factor-alpha (TNF-alpha), in subcutaneous adipose tissue and the correlation with serum concentrations in peripheral blood of Welsh ponies. Based on clinical examination findings, the animals were divided into two groups: ponies affected with EMS (n = 8) and obese ponies (n = 8). The adipose tissue was examined using immunohistochemical analysis while concentrations IL-6 and TNF-alpha were measured using enzyme-linked immunosorbent assays (ELISAs). Additionally, histological characterization of the adipose tissue was performed. The results obtained showed that IL-6 expression in adipose tissue biopsies derived from animals with EMS was enhanced while TNF-alpha levels of both groups were comparable. Compared to the obese ponies, EMS animals also had significantly elevated levels of serum IL-6 and TNF-alpha. Histological analysis revealed macrophage infiltration and fibrosis in adipose tissue preparations from the EMS group. These data suggest that IL-6 may play a key role in the course of EMS in Welsh ponies. Our findings also demonstrated that analysis of pro-inflammatory cytokines levels in serum may serve as an additional tool for diagnosing EMS.
Adipose Tissue/*metabolism
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Animals
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Female
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Horse Diseases/blood/*metabolism
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Horses
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Interleukin-6/blood/genetics/*metabolism
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Male
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Metabolic Syndrome X/metabolism/*veterinary
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Tumor Necrosis Factor-alpha/blood/genetics/*metabolism
8.The role of inflammation and matrix metalloproteinases in equine endometriosis.
Luca ARESU ; Silvia BENALI ; Diana GIANNUZZI ; Roberto MANTOVANI ; Massimo CASTAGNARO ; Maria Elena FALOMO
Journal of Veterinary Science 2012;13(2):171-177
Equine endometriosis is a multifactorial disease considered to be a major cause of equine infertility. The purpose of this study was to evaluate the reliability of histomorphological grading for biopsy-like samples compared to entire uterine wall samples, to examine the association between the degree of endometriosis with animal age, and to investigate the role of inflammation in endometriosis and the expression of different matrix metalloproteinases in equine endometrium. Histomorphological lesions in 35 uterine samples were examined while comparing biopsy-like samples and entire-wall samples. Seventeen uterine samples were stained with antibodies against MMP-2, MMP-9, MMP-14, and TIMP-2. The morphologic evaluation results of the biopsy-like tissue and entire-wall samples were significantly correlated. Endometriosis in older mares (>12 years of age) was more severe than in young mares (2~4 years of age), confirming the positive correlation between animal age and disease severity, while inflammation was poorly related to the degree of endometriosis. MMP-2 and MMP-14 were detected in stromal cells, while MMP-9 and TIMP-2 were both found in stromal and glandular epithelial cells. There were no significant differences in MMPs expression between the two groups (young vs. old mares). Additional studies on the activity of MMPs could further define the role of these enzymes in equine endometriosis.
Animals
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Endometriosis/metabolism/pathology/*veterinary
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Female
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Gene Expression Regulation, Enzymologic/*physiology
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Horse Diseases/metabolism/*pathology
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Horses
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Immunohistochemistry/veterinary
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Inflammation/pathology/*veterinary
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Matrix Metalloproteinases/genetics/*metabolism
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Uterus/metabolism/pathology
9.Construction of recombinant lentivirus vaccine with single round replication.
Chinese Journal of Epidemiology 2006;27(3):249-252
OBJECTIVETo develop a safe and effective lentivirus vaccine model and provide insights into the development of other lentivirus vaccines.
METHODSIn this study, a construct of pGPT was made by deleting env gene in the infectious Equine infectious anemia virus (EIAV) molecular clone of WU57. Since the overlaping of EIAV Rev gene with env gene, there was no Rev gene in the construct of pGPT. For compensation of Rev function, the construct of pGPTC was made by inserting 4 copies of constitutive RNA transport elements (CTEs) from Mason-Pfizer monkey virus into the construct of pGPT. In addition, a construct designated pTEB expressing EIAV Env protein was made while env gene-minus viruses were made by co-transfection of pGPT/pTEB or pGPTC/pTEB into 293 cells. Western blot was used to identify the development of recombinant virus particles. Then immunofluorescence assay was used to evaluate the infectivity of recombinant virus particles in vitro.
RESULTSEIAV proteins expression was detected in the supernatant of transfected 293 cells by Western blot within pGPTC/pTEB transfected cells. However, no evidence of EIAV proteins expression was observed within pGPT/pTEB transfected cells. EIAV proteins expression was detected in the first round but not in the second round infected EK cells with EIAV(GPTC) by immunofluorescence assay.
CONCLUSIONRev/RRE was necessary for expression of viral structural proteins; CTEs from Mason-Pfizer monkey virus was functionally interchangeable with EIAV Rev/RRE to help RNAs transportation out of nucleus to express structural proteins and EIAV particles were produced in the transfected 293 cells. A live EIAV recombinant virus with single round infection had been developed.
Animals ; Blotting, Western ; Cells, Cultured ; Fluorescent Antibody Technique ; Genes, rev ; Haplorhini ; Horses ; Humans ; Infectious Anemia Virus, Equine ; genetics ; Lentivirus ; immunology ; Lentivirus Infections ; immunology ; prevention & control ; Mason-Pfizer monkey virus ; genetics ; Transfection ; Vaccines, Synthetic ; Viral Vaccines ; genetics ; immunology
10.Antiviral activity determination of recombinant equine interferon-gamma and identification inhibited antiviral activity of monoclonal antibodies.
Yu BAI ; Weiye CHEN ; Tiegang TONG ; Weijun ZHANG ; Shulan XU ; Qun WANG ; Qingge SUN ; Guangliang LIU ; Zhigao BU ; Donglai WU
Chinese Journal of Biotechnology 2008;24(7):1258-1262
Equine interferon-gamma (eIFN-gamma) expressed both in E. coli and baculovirus were evaluated for antiviral activity against recombinant Vesicular Stomatits Virus expressing green fluorescence protein (rVSV-GFP) in EFK-78 cells. The assays were conducted in 96-well plate. Virus infectivity was measured by quantifying GFP-positive cells, instead of quantifying the CPE reduction. Prior to infection of EFK-78 cells with rVSV-GFP, the cells were incubated with eIFN-gamma. The GFP expression in the EFK-78 cells dramatically decreased in the cells treated with eIFN-gamma in a dose-dependent manner, comparing with the mock-treated cells. The titers of antiviral activity were 1 x 10(3) AU/mL and 1 x 10(5) AU/mL of eIFN-gamma expressed from E. coli and baculovirus, respectively. The antiviral activities of the recombinant eIFN-gamma were highly efficient and specific, as it was blocked by mAbs against eIFN-gamma.
Animals
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Antibodies, Monoclonal
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immunology
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Antiviral Agents
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metabolism
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pharmacology
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Baculoviridae
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genetics
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metabolism
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Escherichia coli
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genetics
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metabolism
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Green Fluorescent Proteins
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metabolism
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Horses
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Interferon-gamma
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biosynthesis
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genetics
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pharmacology
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Recombinant Proteins
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Vesicular stomatitis Indiana virus
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drug effects
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metabolism