1.The engagement of histone lysine methyltransferases with nucleosomes: structural basis, regulatory mechanisms, and therapeutic implications.
Yanjing LI ; Kexue GE ; Tingting LI ; Run CAI ; Yong CHEN
Protein & Cell 2023;14(3):165-179
Histone lysine methyltransferases (HKMTs) deposit methyl groups onto lysine residues on histones and play important roles in regulating chromatin structure and gene expression. The structures and functions of HKMTs have been extensively investigated in recent decades, significantly advancing our understanding of the dynamic regulation of histone methylation. Here, we review the recent progress in structural studies of representative HKMTs in complex with nucleosomes (H3K4, H3K27, H3K36, H3K79, and H4K20 methyltransferases), with emphasis on the molecular mechanisms of nucleosome recognition and trans-histone crosstalk by these HKMTs. These structural studies inform HKMTs' roles in tumorigenesis and provide the foundations for developing new therapeutic approaches targeting HKMTs in cancers.
Nucleosomes
;
Histones/metabolism*
;
Histone-Lysine N-Methyltransferase/metabolism*
;
Lysine/metabolism*
;
Methyltransferases/metabolism*
;
Methylation
2.Research Progress of Role and Mechanism of SETD7 in Tumor Occurrence and Progression.
Chinese Journal of Lung Cancer 2023;26(1):38-45
The occurence and development of tumors is a complicated process, which not only depends on the mutation or deletion of genes, but also is affected by epigenetic regulation. Accumulating evidences have shown that epigenetic modifications play fundamental roles in transcriptional regulation, heterochromatin formation, X chromosome inactivation, DNA damage response and tumor development. SET domain containing lysine methyltransferase 7 (SETD7) was initially identified as an important lysine methyltransferase, which methylated histone and non-histone proteins. These modifications play fundamental roles. Once this modification disorders, it can directly lead to cell abnormalities and cause many diseases. Studies have shown that SETD7 is related to the occurence and development of various tumors, but the methylation sites of SETD7 and its regulatory mechanism have not been fully elucidated. This article summarizes the research progress of the role of SETD7 on histone and non-histone methylation modification in tumors and the molecular mechanism, in order to provide new therapeutic targets for tumor pathogenesis and diagnosis.
.
Humans
;
Epigenesis, Genetic
;
Histone-Lysine N-Methyltransferase/metabolism*
;
Lysine/metabolism*
;
Lung Neoplasms/genetics*
;
Histones/metabolism*
3.Effect of miRNA-200b on the proliferation of liver cancer cells via targeting SMYD2/p53 signaling pathway.
Weijin FANG ; Liying SONG ; Zuojun LI ; Peipei MENG ; Shanru ZUO ; Shikun LIU
Journal of Central South University(Medical Sciences) 2022;47(10):1303-1314
OBJECTIVES:
Our previous study has verified that high level of SET and MYND domain-containing protein 2 (SMYD2) plays an important role in acquiring aggressive ability for liver cancer cells in hepatocellular carcinoma. MiR-200b as a tumor suppressor gene involves in a variety of cancers. This study aims to investigate the correlation between miR-200b and SMYD2 in hepatocellular carcinoma and the underlying mechanism.
METHODS:
Firstly, the levels of SMYD2 and miR-200b in hepatocellular carcinoma tissues and matched adjacent non-tumor liver tissues were tested with real-time reverse transcription-polymerase chain reaction (RT-PCR) and Western blotting. Secondly, we evaluated the interaction between miR-200b and SMYD2 using dual-luciferase reporter assay. Thirdly, we elucidated the effect of miR-200b on SMYD2 and its downstream targets p53/CyclinE1. Finally, we silenced SMYD2 in hepatocellular carcinoma cell lines to investigate its effect on tumor proliferation and cell cycle progression, and further confirmed the correlation among SMYD2 and p53/CyclinE1.
RESULTS:
Compared with the matched adjacent non-tumor liver tissues, miR-200b was obviously decreased, and SMYD2 was significantly increased in hepatocellular carcinoma (both P<0.05). Spearman's rank correlation revealed that miR-200b expression was negatively correlated with SMYD2 (P<0.01). Computer algorithm and dual-luciferase reporter assay revealed that miR-200b directly targeted and suppressed SMYD2 in HEK 293T cells. The down-regulated miR-200b expression promoted hepatoma cell proliferation (P<0.05) and increased SMYD2 expression(P<0.01), while the up-regulated expression of miR-200b had an opposite effect. The knockdown of SMYD2 suppressed the proliferation of MHCC-97L cells (P<0.01), down-regulated CyclinE1, and up-regulated p53 expression (both P<0.05).
CONCLUSIONS
MiR-200b is involved in hepatocellular carcinoma progression via targeting SMYD2 and regulating SMYD2/p53/CyclinE1 signaling pathway and may be used as a potential target for hepatocellular carcinoma treatment.
Humans
;
Carcinoma, Hepatocellular/pathology*
;
Tumor Suppressor Protein p53/metabolism*
;
MicroRNAs/metabolism*
;
Cell Line, Tumor
;
Signal Transduction
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Liver Neoplasms/pathology*
;
Cell Proliferation/genetics*
;
Histone-Lysine N-Methyltransferase/metabolism*
4.Dental stem cell-derived extracellular vesicles transfer miR-330-5p to treat traumatic brain injury by regulating microglia polarization.
Ye LI ; Meng SUN ; Xinxin WANG ; Xiaoyu CAO ; Na LI ; Dandan PEI ; Ang LI
International Journal of Oral Science 2022;14(1):44-44
Traumatic brain injury (TBI) contributes to the key causative elements of neurological deficits. However, no effective therapeutics have been developed yet. In our previous work, extracellular vesicles (EVs) secreted by stem cells from human exfoliated deciduous teeth (SHED) offered new insights as potential strategies for functional recovery of TBI. The current study aims to elucidate the mechanism of action, providing novel therapeutic targets for future clinical interventions. With the miRNA array performed and Real-time PCR validated, we revealed the crucial function of miR-330-5p transferred by SHED-derived EVs (SHED-EVs) in regulating microglia, the critical immune modulator in central nervous system. MiR-330-5p targeted Ehmt2 and mediated the transcription of CXCL14 to promote M2 microglia polarization and inhibit M1 polarization. Identified in our in vivo data, SHED-EVs and their effector miR-330-5p alleviated the secretion of inflammatory cytokines and resumed the motor functional recovery of TBI rats. In summary, by transferring miR-330-5p, SHED-EVs favored anti-inflammatory microglia polarization through Ehmt2 mediated CXCL14 transcription in treating traumatic brain injury.
Animals
;
Brain Injuries, Traumatic/therapy*
;
Chemokines, CXC/metabolism*
;
Extracellular Vesicles/metabolism*
;
Histocompatibility Antigens/metabolism*
;
Histone-Lysine N-Methyltransferase/metabolism*
;
Humans
;
MicroRNAs/metabolism*
;
Microglia/metabolism*
;
Rats
;
Stem Cells/metabolism*
5.Links between Serine Biosynthesis Pathway and Epigenetics in Cancer Metabolism.
Clinical Nutrition Research 2018;7(3):153-160
Cancer metabolism is considered as one of major cancer hallmarks. It is important to understand cancer-specific metabolic changes and its impact on cancer biology to identify therapeutic potentials. Among cancer-specific metabolic changes, a role of serine metabolism has been discovered in various cancer types. Upregulation of serine synthesis pathway (SSP) supports cell proliferation and metastasis. The change of serine metabolism is, in part, mediated by epigenetic modifiers, such as Euchromatic histone-lysine N-methyltransferase 2 and Lysine Demethylase 4C. On the other hand, SSP also influences epigenetic landscape such as methylation status of nucleic acids and histone proteins via affecting S-adenosyl methionine production. In the review, we highlight recent evidences on interactions between SSP and epigenetic regulation in cancer. It may provide an insight on roles and regulation of SSP in cancer metabolism and the potential of serine metabolism for cancer therapy.
Biology
;
Cell Proliferation
;
Epigenomics*
;
Hand
;
Histone-Lysine N-Methyltransferase
;
Histones
;
Lysine
;
Metabolism*
;
Methionine
;
Methylation
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Neoplasm Metastasis
;
Nucleic Acids
;
Serine*
;
Up-Regulation
6.MLL-SEPT5 Fusion Transcript in Two de novo Acute Myeloid Leukemia Patients With t(11;22)(q23;q11).
Nana WANG ; Xiaojin WU ; Guangying SHENG ; Liang MA ; Lijun WEN ; Hong YAO ; Suning CHEN
Annals of Laboratory Medicine 2016;36(5):501-503
No abstract available.
Base Sequence
;
Cell Cycle Proteins/*genetics
;
Chromosomes, Human, Pair 11
;
Chromosomes, Human, Pair 22
;
Female
;
Gene Rearrangement
;
Histone-Lysine N-Methyltransferase/*genetics
;
Humans
;
Immunophenotyping
;
In Situ Hybridization, Fluorescence
;
Karyotype
;
Leukemia, Myeloid, Acute/*diagnosis/metabolism
;
Male
;
Myeloid-Lymphoid Leukemia Protein/*genetics
;
Oncogene Proteins, Fusion/genetics
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Reverse Transcriptase Polymerase Chain Reaction
;
Septins/*genetics
;
Sequence Analysis, DNA
;
Translocation, Genetic
;
Young Adult
7.Acute Myeloid Leukemia With MLL Rearrangement and CD4+/CD56+ Expression can be Misdiagnosed as Blastic Plasmacytoid Dendritic Cell Neoplasm: Two Case Reports.
Ju Mee LEE ; In Suk KIM ; Jeong Nyeo LEE ; Sang Hyuk PARK ; Hyung Hoi KIM ; Chulhun L CHANG ; Eun Yup LEE ; Hye Ran KIM ; Seung Hwan OH ; Sae Am SONG
Annals of Laboratory Medicine 2016;36(5):494-497
No abstract available.
Adult
;
Antigens, CD4/*metabolism
;
Antigens, CD56/*metabolism
;
Bone Marrow/metabolism/pathology
;
Dendritic Cells/cytology/*metabolism
;
Diagnostic Errors
;
Exons
;
Female
;
Flow Cytometry
;
Gene Rearrangement
;
Hematologic Neoplasms/diagnosis
;
Histone-Lysine N-Methyltransferase/genetics
;
Humans
;
Immunohistochemistry
;
In Situ Hybridization, Fluorescence
;
Leukemia, Myeloid, Acute/*diagnosis
;
Male
;
Middle Aged
;
Myeloid-Lymphoid Leukemia Protein/genetics
;
Real-Time Polymerase Chain Reaction
;
Sequence Analysis, DNA
;
Transcription Factors/genetics
;
Translocation, Genetic
9.The role of maintenance proteins in the preservation of epithelial cell identity during mammary gland remodeling and breast cancer initiation.
Chinese Journal of Cancer 2014;33(2):51-67
During normal postnatal mammary gland development and adult remodeling related to the menstrual cycle, pregnancy, and lactation, ovarian hormones and peptide growth factors contribute to the delineation of a definite epithelial cell identity. This identity is maintained during cell replication in a heritable but DNA-independent manner. The preservation of cell identity is fundamental, especially when cells must undergo changes in response to intrinsic and extrinsic signals. The maintenance proteins, which are required for cell identity preservation, act epigenetically by regulating gene expression through DNA methylation, histone modification, and chromatin remodeling. Among the maintenance proteins, the Trithorax (TrxG) and Polycomb (PcG) group proteins are the best characterized. In this review, we summarize the structures and activities of the TrxG and PcG complexes and describe their pivotal roles in nuclear estrogen receptor activity. In addition, we provide evidence that perturbations in these epigenetic regulators are involved in disrupting epithelial cell identity, mammary gland remodeling, and breast cancer initiation.
Animals
;
Breast Neoplasms
;
genetics
;
pathology
;
physiopathology
;
Cell Transformation, Neoplastic
;
Chromatin
;
genetics
;
metabolism
;
Epigenesis, Genetic
;
physiology
;
Epithelial Cells
;
cytology
;
Female
;
Gene Expression Profiling
;
Gene Expression Regulation, Developmental
;
Histone-Lysine N-Methyltransferase
;
Humans
;
Mammary Glands, Animal
;
cytology
;
growth & development
;
Mammary Glands, Human
;
cytology
;
growth & development
;
Myeloid-Lymphoid Leukemia Protein
;
genetics
;
physiology
;
Polycomb-Group Proteins
;
genetics
;
physiology
;
Receptors, Estrogen
;
metabolism
10.Bivalent histone modifications during tooth development.
Li-Wei ZHENG ; Bin-Peng ZHANG ; Ruo-Shi XU ; Xin XU ; Ling YE ; Xue-Dong ZHOU
International Journal of Oral Science 2014;6(4):205-211
Histone methylation is one of the most widely studied post-transcriptional modifications. It is thought to be an important epigenetic event that is closely associated with cell fate determination and differentiation. To explore the spatiotemporal expression of histone H3 lysine 4 trimethylation (H3K4me3) and histone H3 lysine 27 trimethylation (H3K27me3) epigenetic marks and methylation or demethylation transferases in tooth organ development, we measured the expression of SET7, EZH2, KDM5B and JMJD3 via immunohistochemistry and quantitative polymerase chain reaction (qPCR) analysis in the first molar of BALB/c mice embryos at E13.5, E15.5, E17.5, P0 and P3, respectively. We also measured the expression of H3K4me3 and H3K27me3 with immunofluorescence staining. During murine tooth germ development, methylation or demethylation transferases were expressed in a spatial-temporal manner. The bivalent modification characterized by H3K4me3 and H3K27me3 can be found during the tooth germ development, as shown by immunofluorescence. The expression of SET7, EZH2 as methylation transferases and KDM5B and JMJD3 as demethylation transferases indicated accordingly with the expression of H3K4me3 and H3K27me3 respectively to some extent. The bivalent histone may play a critical role in tooth organ development via the regulation of cell differentiation.
Animals
;
Cell Differentiation
;
physiology
;
DNA-Binding Proteins
;
analysis
;
Dental Papilla
;
embryology
;
Embryo, Mammalian
;
Enamel Organ
;
embryology
;
Enhancer of Zeste Homolog 2 Protein
;
Epigenesis, Genetic
;
physiology
;
Gene Expression Regulation, Developmental
;
Histone-Lysine N-Methyltransferase
;
analysis
;
Histones
;
metabolism
;
Jumonji Domain-Containing Histone Demethylases
;
analysis
;
Lysine
;
metabolism
;
Methylation
;
Mice
;
Mice, Inbred BALB C
;
Odontogenesis
;
physiology
;
Polycomb Repressive Complex 2
;
analysis
;
Protein Processing, Post-Translational
;
physiology
;
Tooth Germ
;
embryology

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