1.Histone deacetylases and acute kidney injury.
Feng-Chen SHEN ; Shou-Gang ZHUANG
Acta Physiologica Sinica 2022;74(1):73-79
Histone acetylation is one of the epigenetic modifications. Histone acetylation, which is catalyzed by histone acetyltransferases and negatively regulated by histone deacetylases, plays an important role in a variety of cellular physiological and pathophysiological processes. Recent studies have shown that histone deacetylases are involved in a variety of pathophysiological responses to acute kidney injury, such as apoptosis, dedifferentiation, proliferation and regeneration. This article reviews the role and underlying mechanism of histone deacetylases in acute kidney injury induced by ischemia reperfusion, nephrotoxicants, sepsis and rhabdomyolysis.
Acetylation
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Acute Kidney Injury
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Histone Acetyltransferases/metabolism*
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Histone Deacetylases/metabolism*
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Humans
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Protein Processing, Post-Translational
2.Histone deacetylase inhibitors as therapeutic agents for polyglutamine disorders.
Hong JIANG ; Dandan JIA ; Beisha TANG
Chinese Journal of Medical Genetics 2010;27(1):52-55
During the past few years, gene expression studies have shown that the perturbation of transcription frequently results in neuronal dysfunction in polyglutamine (PolyQ) diseases such as Huntington's disease (HD). Histone deacetylases (HDACs) act as repressors of transcription through interaction with co-repressor complexes, leading to chromatin remodelling. Aberrant interaction between PolyQ proteins and regulators of transcription could be one mechanism by which transcriptional dysregulation occurs. Here, the authors discuss the possible mechanism of transcriptional dysfunction in PolyQ disease, including the effect of histone acetyltransferases (HATs) and HDACs on pathogenesis, and the potential therapeutic pathways through which histone deacetylase inhibitors (HDACIs) might act to correct the aberrant transcription observed in HD and other PolyQ diseases.
Animals
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Histone Acetyltransferases
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genetics
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metabolism
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Histone Deacetylase Inhibitors
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therapeutic use
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Histone Deacetylases
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genetics
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metabolism
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Humans
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Huntington Disease
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drug therapy
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enzymology
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metabolism
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Peptides
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metabolism
3.Interactive regulatory effect of histone H3K9ac acetylation and histone H3K9me3 methylation on cardiomyogenesis in mice.
Shuo LI ; Xiao-Mei LUO ; Bo-Hui PENG ; Chang-Jian YANG ; Chang PENG
Chinese Journal of Contemporary Pediatrics 2018;20(11):950-954
OBJECTIVE:
To study the interactive regulatory effect of histone acetylation and methylation on cardiomyogenesis, and to provide a theoretical basis for the prevention and treatment of congenital heart disease.
METHODS:
A total of 24 Kunming mice were randomly divided into embryo day 14.5 (ED 14.5) group, embryo day 16.5 (ED 16.5) group, postnatal day 0.5 (PND 0.5) group, and postnatal day 7 (PND 7) group, with 6 mice in each group, and the heart tissue of fetal and neonatal mice was collected. Colorimetry was used to measure the activities of histone acetylases (HATs) and histone methyltransferases (HMTs) in the myocardium. Western blot was used to measure the expression of H3K9ac and H3K9me3 in the myocardium.
RESULTS:
Colorimetry showed that the activities of HATs and HMTs were higher before birth and were lower after birth. There was a significant difference in the activity of HATs in the myocardium between the PND 0.5 and PND 7 groups and the ED 14.5 group (P<0.05), as well as between the PND 7 group and the ED 16.5 group (P<0.05). There was also a significant difference in the activity of HMTs in the myocardium between the PND 7 group and the ED 14.5 and ED 16.5 groups (P<0.05). Western blot showed higher expression of H3K9ac and H3K9me3 before birth and lower expression of H3K9ac and H3K9me3 after birth, and there were significant differences in the expression H3K9ac and H3K9me3 in the myocardium between the PND 0.5 and PND 7 groups and the ED 14.5 and ED 16.5 groups (P<0.05).
CONCLUSIONS
The dynamic expression of HATs, HMTs, H3K9ac, and H3K9me3 is observed during cardiomyogenesis, suggesting that histone H3K9ac acetylation and histone H3K9me3 methylation mediated by HATs and HMTs may play a role in interactive regulation during cardiomyogenesis.
Acetylation
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Animals
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Histone Acetyltransferases
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Histones
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metabolism
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Methylation
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Mice
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Protein Processing, Post-Translational
4.K (lysine) acetyltransferase 2A affects the osteogenic differentiation of periodontal ligament stem cells through the canonical Wnt pathway.
Guo WUCHENG ; Cheng JIELI ; Yang ZHENGYI ; Zhang YI ; He ENLIANG ; Qian JUN ; Song JINGJING ; Sun JIN ; Yuan LIN
West China Journal of Stomatology 2018;36(1):39-45
OBJECTIVE:
This study aims to investigate the mechanism of K (lysine) acetyltransferase 2A (KAT2A) regulation and control on the osteogenic differentiation of periodontal ligament stem cells (PDLSCs).
METHODS:
The expression levels of KAT2A in PDLSCs were compared from each generation of the normal (H-PDLSCs) and periodontitis tissues (P-PDLSCs). The influences of KAT2A gene interference on the osteogenic differentiation of PDLSCs were also detected. In addition, the influences of the KAT2A gene interference to the canonical Wnt pathway and ligands were detected. The upstream and down-stream relationships between KAT2A and canonical Wnt pathway were also determined.
RESULTS:
The decreased expression of KAT2A in PDLSCs from the inflammatory tissue in each generation was compared with that in PDLSCs from the healthy tissue, and the difference was statistically significant (P<0.05). When the KAT2A gene was disrupted, the osteogenesis ability of PDLSC was declined, and the difference was statistically significant (P<0.05). The canonical Wnt pathway was activated, and the antagonist Dickkopf-1 (DKK-1) was reduced. After the DKK-1 addition, the osteogenic differentiation of the disturbed PDLSCs was recovered, and KAT2A was unaffected.
CONCLUSIONS
The KAT2A expression in PDLSCs was decreased because of perio-dontitis. The classical Wnt pathway was activated to inhibit the osteogenic differentiation of the cells.
Acetyltransferases
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Cell Differentiation
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Cells, Cultured
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Histone Acetyltransferases
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metabolism
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Humans
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Lysine
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Osteogenesis
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Periodontal Ligament
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metabolism
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Periodontitis
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metabolism
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Stem Cells
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Wnt Signaling Pathway
5.Structure-activity relationships of histone deacetylase inhibitors.
Yu-Mei TAN ; Wen-Yuan HUANG ; Nie-Fang YU
Acta Pharmaceutica Sinica 2009;44(10):1072-1083
Among those enzymes that regulate gene expression, histone deacetylases (HDACs) play important roles in cell cycles. Extensive studies were carried out in the field of HDACs and the applications of HDAC inhibitors (HDACIs) as chemotherapeutic interventions for diverse diseases. HDACIs have moved from laboratories to clinic uses. Huge bodies of related research results were well documented and dispersed in literature. According to our understanding, HDACIs can be broadly classified as hydroxamic acids, cyclic tetrapeptides, short chain fatty acids, benzamides and electrophilic ketones. Herein, we are going to review the design and their structure-activity relationships of HDACIs and according to their structural catalogs.
Antineoplastic Agents
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chemistry
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pharmacology
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Benzamides
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chemistry
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Fatty Acids
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chemistry
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Histone Acetyltransferases
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metabolism
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Histone Deacetylase Inhibitors
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chemistry
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pharmacology
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Histone Deacetylases
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metabolism
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Humans
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Hydroxamic Acids
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chemistry
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Molecular Structure
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Peptides, Cyclic
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chemistry
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Structure-Activity Relationship
6.Histone Acetylation Level and Histone Acetyltransferase/Deacetylase Activity in Ejaculated Sperm from Normozoospermic Men.
Jee Hyun KIM ; Byung Chul JEE ; Jang Mi LEE ; Chang Suk SUH ; Seok Hyun KIM
Yonsei Medical Journal 2014;55(5):1333-1340
PURPOSE: The aim of this work was to evaluate nuclear histone acetylation level and total histone acetyltransferase (HAT) and deacetylase (HDAC) activity in ejaculated sperm and their relevance to conventional sperm parameters. MATERIALS AND METHODS: Thirty-three normozoospermic men were included in this study. Semen samples were processed by swim-up and then immunostained by six acetylation antibodies (H3K9ac, H3K14ac, H4K5ac, H4K8ac, H4K12ac, and H4K16ac). Our preliminary study verified the expression of HAT/HDAC1 in mature human sperm. From vitrified-warmed sperm samples, total HAT/HDAC activity was measured by commercially available kits. Nuclear DNA integrity was also measured by TUNEL assay. RESULTS: The levels of six acetylation marks were not related with conventional sperm parameters including sperm DNA fragmentation index (DFI) as well as HAT/HDAC activity. However, sperm DFI was positively correlated with HAT activity (r=0.038 after adjustment, p<0.02). HAT activity showed a negative relationship with HDAC activity (r=-0.51, p<0.01). Strict morphology was negatively correlated with acetylation enzyme index (=HAT activity/HDAC activity) (r=-0.53, p<0.01). CONCLUSION: Our works demonstrated a significant relationship of acetylation-associated enzyme activity and strict morphology or sperm DFI.
Acetylation
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Adult
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DNA Fragmentation
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Epigenesis, Genetic
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Histone Acetyltransferases/*metabolism
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Histones/*metabolism
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Humans
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Immunohistochemistry
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Male
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Middle Aged
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Protein Processing, Post-Translational
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Semen Analysis
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Spermatozoa/*metabolism
7.Effects of histone acetylation on differentiation of mesenchymal stem cells.
Chinese Journal of Medical Genetics 2008;25(2):159-163
OBJECTIVETo explore the effects of histone acetylation modification on the regulation of mesenchymal stem cells (MSCs) differentiation into cardiomyocytes in myocardium microenvironment, by detecting the acetylase activity, expression of histone acetylation gene Gcn5 and myocardial gene GATA4 in myocardium transplanted by MSCs transfected with plasmid ZJ3.
METHODSExtracted the plasmid containing short hairpin RNA (shRNA) against Gcn5 gene (ZJ3) and transfected it into MSCs. After 24 hours, the MSCs were transplanted into the rat myocardium tissues and the acetylase activity, the expression of acetylation gene and myocardium development gene were detected after two weeks.
RESULTSThe acetylase activity in the experimental group was significantly lower than all control groups; Gcn5 and GATA4 expression in myocardium of experimental group had significant reduction compared with the control groups.
CONCLUSIONInhibition of histone acetylation in the MSC cells can inhibit the transcription process of specialized myocardium in the myocardium microenvironment. The result establishes foundation for researches of histone acetylation and mechanisms of MSCs differentiation.
Acetylation ; Animals ; Cell Differentiation ; genetics ; physiology ; Cells, Cultured ; Histone Acetyltransferases ; genetics ; Histones ; metabolism ; Mesenchymal Stromal Cells ; cytology ; metabolism ; RNA Interference ; Rats ; Rats, Sprague-Dawley
8.Histone acetylation and congenital heart diseases.
Jun XU ; Hui-jun WANG ; Guo-ying HUANG
Chinese Journal of Pediatrics 2013;51(7):552-554
Acetylation
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Animals
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Child
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DNA Methylation
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Epigenesis, Genetic
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Heart
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physiology
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Heart Defects, Congenital
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etiology
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genetics
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metabolism
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Histone Acetyltransferases
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metabolism
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Histone Deacetylases
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metabolism
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Histones
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chemistry
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genetics
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physiology
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Humans
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Protein Processing, Post-Translational
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Transcription Factors
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metabolism
9.Histone acetylation and expression of acetylation-related enzymes in children with tetralogy of Fallot.
Jun XU ; Yi-Xiang LIN ; Ruo-Yi GU ; Hui-Jun WANG ; Xiao-Jing MA ; Duan MA ; Guo-Ying HUANG
Chinese Journal of Contemporary Pediatrics 2013;15(10):817-821
OBJECTIVETo study the expression of histone acetyltransferases (HATs) and histone deacetylases (HDACs) in children with tetralogy of Fallot (TOF), and to investigate the role of histone acetylation and acetylation-related enzymes in the pathogenesis of TOF.
METHODSMyocardial tissue samples in the TOF group were obtained from 46 children with TOF who underwent radical operation, and myocardial tissue samples in the control group were obtained from 16 children who suffered accidental deaths and had no cardiac anomalies as shown by autopsy. The acetylation of H3K9, H3K18 and H3K27 was evaluated by immunohistochemistry. The mRNA expression of HATs and HDACs in the myocardium was measured by real-time PCR. The correlation between mRNA expression of HATs and HDACs and histone acetylation was analyzed.
RESULTSCompared with the control group, the TOF group showed significantly increased acetylation of H3K9 (P=0.0165) and significantly decreased acetylation of H3K18 (P=0.0048) and H3K27 (P=0.0084). As to 4 HATs and 6 HDACs, the mRNA expression of EP300 and CBP was significantly higher in the TOF group than in the control group (P=0.025; P=0.017), and there was no significant difference in the mRNA expression of other HATs and HDACs between the two groups. The correlation analysis revealed a positive correlation between H3K9 acetylation and mRNA expression of EP300 (r=0.71, P<0.01) and CBP (r=0.72, P<0.01).
CONCLUSIONSUpregulated mRNA expression of EP300 and CBP may be associated with increased H3K9 acetylation, suggesting that EP300 and CBP might affect cardiac development by regulating H3K9 acetylation.
Acetylation ; E1A-Associated p300 Protein ; genetics ; Female ; Histone Acetyltransferases ; genetics ; Histone Deacetylases ; genetics ; Histones ; metabolism ; Humans ; Infant ; Male ; Myocardium ; metabolism ; Peptide Fragments ; genetics ; RNA, Messenger ; analysis ; Sialoglycoproteins ; genetics ; Tetralogy of Fallot ; metabolism
10.Recent advances in DNA demethylation in tumor therapy.
Chinese Journal of Pathology 2009;38(5):355-357
Animals
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Cytidine
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analogs & derivatives
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pharmacology
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DNA Methylation
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drug effects
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DNA Modification Methylases
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metabolism
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Gene Knockout Techniques
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Histone Acetyltransferases
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metabolism
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Histone Deacetylase Inhibitors
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pharmacology
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Humans
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Hydroxamic Acids
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pharmacology
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Neoplasms
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genetics
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physiopathology
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therapy
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RNA Interference
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Valproic Acid
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pharmacology