1.Value of creatine kinase in early diagnosis, detection of the heterozygote, primary research gene level of Duchenne muscular dystrophy in Vietnamese patients
Journal of Medical Research 2003;23(3):114-119
The study included 112 patients with diagnosis of DMD at National Institute of Pediatrics and 24 patient’s brothers. The results showed that: value of definitive diagnosis of creatine kinase (CK) test were 100% (CK levels of 100% patients were higher than CK levels of normal children). CK method could detect very early DMD even patients who were not yet clinical expression (11/24 patient’s were not yet clinical expression detected DMD by CK). The value of CK for heterozygote detection was 82.3% for DMD patient’s mothers who had clearly family history and 35.3% for DMD patient’s mothers who had only one child with DMD in the family. Based on PCR result analysis, gene mutation of two DMD patient with clearly family history had not belonged to 48- exon.
diagnosis
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Creatine Kinase
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Heterozygote
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Muscular Dystrophy, Duchenne
2.Molecular genetic diagnosis of a carrier with rare α-thalassemia mutations.
Qiang MA ; Qingsong LIU ; Yan CAI ; Jianlan SHAO ; Cheng HE ; Xin QING ; Qilin SONG ; Fang DENG ; Xiaolan GUO
Chinese Journal of Medical Genetics 2019;36(4):368-370
OBJECTIVE:
To explore the cause of inconsistent genotypes for an α-thalassemia carrier by using two commercial genotyping kits.
METHODS:
GAP-PCR and PCR-reverse dot blotting (PCR-RDB) were employed to determine the genotype of the carrier, while Sanger sequencing was used to verify the results.
RESULTS:
Sequencing analysis demonstrated that the subject has carried a α1 globin gene with a 3.7 kb heterozygous deletion. In addition, two novel mutations, IVS-II-55(T>G) and IVS-II-119(G>TCGGCCC), were found in intron 2 of α2 globin gene.
CONCLUSION
The two mutations located in the binding regions of PCR primers have caused failure of PCR amplification and misreading of the genotype. Combination of clinical and hematological phenotypes is indispensible to infer the genotype of carriers for accurate diagnosis.
Genotype
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Heterozygote
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Humans
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Mutation
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alpha-Thalassemia
;
genetics
3.Resistance to thyroid hormone syndrome due to p.Cys446Ser variant of THRbeta gene in a pedigree.
Shuguo SUN ; Yuanhong DING ; Yan KONG ; Fanxiang WANG
Chinese Journal of Medical Genetics 2021;38(9):838-840
OBJECTIVE:
To explore the genetic basis for a Chinese pedigree affected with resistance to thyroid hormone syndrome (RTH).
METHODS:
Exons 7 to 10 of the THRbeta gene were sequenced for the proband and members of his pedigree.
RESULTS:
Three patients from the pedigree were identified. All have presented with palpitation, fatigue, goiter, elevated free thyroid hormone and free triiodothyronine, and normal or elevated thyrotropin. Genetic testing revealed that the proband, his mother, second sister and one of her daughters had carried a heterozygous c.1336T>A variant of the THRbeta gene, which resulted in substitution of Cysteine by Serine at position 446. The variant was unreported previously. Based on the American College of Medical Genetics and Genomics standards and guidelines, the c.1336T>A(p.Cys446Ser) variant of THRbeta gene was predicted to be lilely pathogenic(PM1+PM2+PM5+PP3).
CONCLUSION
The c.1336T>A variant, identified in the exon 10 of the THRbeta gene, probably underlay the RTH in this pedigree. Genetic testing has validated the clinical diagnosis for this pedigree.
Female
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Genomics
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Heterozygote
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Humans
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Mothers
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Mutation
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Pedigree
4.Analysis of the Galactose-1-Phosphate Uridyltransferase (GALT) Gene in a Duarte Variant/classical Galactosemia (D/G) Compound Heterozygote.
Hye Ran YANG ; Jeong Eun KIM ; Jae Sung KO ; Jung Han SONG ; Sung Sup PARK ; Jeong Kee SEO
Korean Journal of Pediatric Gastroenterology and Nutrition 2003;6(1):84-89
Galactosemia is a rare autosomal recessive disorder caused by the deficiency of galactose-1-phosphate uridyltransferase (GALT) enzyme activity. Classic galactosemia (G/G) is due to severe GALT deficiency in the presence of a GALT gene mutation, whereas Duarte variant (D/D) has 50% of normal GALT activity and benign clinical course. The D2 allele of Duarte variant is linked to a promoter deletion 5' to the translation start site (-119 to -116 delGTCA) in addition to N314D. So, Duarte variant/classical galactosemia (D/G) compound heterozygotes have relatively mild clinical manifestation than classical galactosemia and can be differentiated from classical galactosemia or Duarte variant by mutational analysis. We report a case of D/G galactosemia compound heterozygote proven by the reduction of GALT enzyme activity in erythrocytes and mutation analysis of GALT gene, which revealed N314D polymorphism and -119 to -116 delGTCA.
Alleles
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Erythrocytes
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Galactosemias*
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Heterozygote*
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UTP-Hexose-1-Phosphate Uridylyltransferase*
5.Analysis of an ABO subtype with a novel variation.
Xinming WU ; Fangyuan JI ; Ni HUO ; Linhai ZHANG ; Liping LIU ; Yong YAO
Chinese Journal of Medical Genetics 2022;39(10):1158-1160
OBJECTIVE:
To analyze the molecular characteristics of a ABO subgroup.
METHODS:
The ABO phenotype was determined with the tube method. Exons of the ABO gene were analyzed by Sanger sequencing, and haplotypes of exons 6 and 7 were analyzed by cloning sequencing.
RESULTS:
By forward typing, the red blood cells showed 3+ agglutination reaction with anti-A and 4+ agglutination with anti-B. A weak reaction with A1 cells and no agglutination reaction with B, O cells by the reverse typing. Sequencing results showed heterozygosity including c.297A>G, c.467C>T, c.526C>G, c.608A>G, c.657C>T, c.703G>A, c.796C>A, c.803G>C, c.930G>A. Cloning sequencing revealed a c.608A>G variant in the A allele compared with the ABO*A1.02.
CONCLUSION
A new variant site of subtype A of c.608G variation has been identified.
ABO Blood-Group System/genetics*
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Alleles
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Exons
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Genotype
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Heterozygote
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Phenotype
6.Meta-analysis for the association of GJB2 gene p.V37I variant and its types with the risk of deafness.
Zaihua WANG ; Ying SHAO ; Jun LI
Chinese Journal of Medical Genetics 2022;39(12):1313-1318
OBJECTIVE:
To assess the association of c.109G>A (p.V37I) variant of the GJB2 gene and its types with the risk of deafness.
METHODS:
PubMed, Embase, Cochrane Library, CNKI, Wanfang, and VIP database were searched for cases with GJB2 gene c.109G>A (p.V37I) variant and its compounds with variants of other sites from case-control studies, cohort studies and cross-sectional studies. The search time was from the establishment of database to April 2021. Two researchers have independently screened the literature according to the inclusion and exclusion criteria, extracted the data, and evaluated the included studies according to the criteria. Stata 12.0 software was used for the meta-analysis and publication bias analysis, and a sensitivity analysis was also carried out when necessary.
RESULTS:
A total of 22 articles (17 in English and 5 in Chinese) were included. There were 7455 cases in the deafness group and 10 464 cases in the control group. The results of meta-analysis showed the c.109G>A (p.V37I) variant to be strongly associated with the risk of deafness (OR: 3.56, 95%CI: 2.31-5.47, P < 0.001). Analysis based on the mutational type also suggested c.109G>A (p.V37I) homozygosity (OR: 11.36, 95%CI: 5.93-21.74, P < 0.001) and compound loss of heterozygosity mutations (OR: 9.27, 95%CI: 3.97-21.64, P < 0.001) to be strongly associated with the risk of deafness. By contrast, heterozygous c.109G>A (p.V37I) variant (OR: 1.20, 95%CI: 0.72-2.00, P = 0.478) and compound heterozygous missense mutation (OR: 1.54, 95%CI: 0.98-2.44, P = 0.063) are not strongly associated with the risk.
CONCLUSION
The homozygous c.109G>A (p.V37I) variants of the GJB2 gene and its compound deletional mutation with another GJB2 allele can significantly increase the risk of deafness. Heterozygous c.109G>A (p.V37I) variant of the GJB2 gene or its compound with a missense mutation of another GJB2 allele do not increase the risk.
Humans
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Cross-Sectional Studies
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Alleles
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Heterozygote
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Homozygote
;
Deafness/genetics*
7.Analysis of TSC2 gene variant in a neonate with tuberous sclerosis complex.
Chinese Journal of Medical Genetics 2022;39(12):1390-1392
OBJECTIVE:
To explore the clinical characteristics and genetic variant in a neonate with tuberous sclerosis complex (TSC).
METHODS:
Clinical data of the neonate was collected. Genomic DNA was extracted from peripheral blood samples of the child and his parents and subjected to next-generation sequencing (NGS).
RESULTS:
The child was noted to have yellowish hair upon birth. NGS revealed that he has harbored a heterozygous c.3914del (p.P1305Rfs*20) frameshifting variant of the TSC2 gene. The variant has probably caused premature termination of translation, resulting in a truncated protein.
CONCLUSION
Yellowish hair has rarely been described as the first manifestation of TSC. The c.3914del (p.P1305Rfs*20) variant of the TSC2 gene probably underlay the TSC in this patient.
Male
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Infant, Newborn
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Humans
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Tuberous Sclerosis/genetics*
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Family
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Carotenoids
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Heterozygote
8.Genetic Screening of Thalassemia among the Couples of Childbearing Age in Ding'an County of Hainan Province and Its Analysis.
Zhi-Hua TU ; Jie WANG ; Jia-Jia HU ; Li-Qiang ZHAO ; Hai-Ling RAN ; An-Guo WANG ; Ye-Juan LI ; Ning MA ; Zhong WU ; Zhi ZHOU
Journal of Experimental Hematology 2019;27(5):1592-1595
OBJECTIVE:
To investigate the gene-carrying rate and genetic types of thalassemia among the couples of child-bearing age in Ding'an, Hainan province.
METHODS:
A total of 1742 couples at child bearing age in the region were screened for thalassemia by detecting the mean corpuscular hemoglobin (MCH) and mean corpuscular volume (MCV). If the sample data of either spouse of couples was tested as MCV<82 fl and /or MCH<27 pg, both samples of the couple would be further assayed by hemoglobin electrophoresis. Those samples of HbA2 2.5 % or HbA2>3.5 % were judged as positive in the preliminary screening, then subjected to genetic diagnosis of thalassemia.
RESULTS:
478 cases out of 1 742 couples of child bearing age were diagnosed as thalassemia gene mutation, and the gene-carrying rate was 13.72 %. In those carriers, 42 couples were diagnosed with the same type of thalassemia, accounting for 3.67 %. The gene-carrying rate of α-thalassemia, β-thalassemia and αβ-thalassemia was 9.56%, 3.10% and 1.06 % respectively.
CONCLUSION
The Ding'an area in Hainan Province is an area with high incidence of thalassemia, and the main genotype is α-thalassemia, showing a distribution of local characteristics. The government should make efferts to popularise the screening for thalassemia, so as to effectively prevent the birth of children with thalassemia major.
Erythrocyte Indices
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Genetic Testing
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Heterozygote
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Humans
;
alpha-Thalassemia
;
beta-Thalassemia
9.Analysis of Genetic Screening in Couples of Reproductive Age for Thalassemia in Lingshui Li Autonomous County of Hainan Province.
Zhi-Hua TU ; Zhi ZHOU ; Wei-Xue WU ; Xiao-Peng WANG ; Yang-Zhi ZHOU ; Ci-Dan HUANG ; Ning MA ; Hai-Ling RUAN ; Li-Qiang ZHAO ; Jie WANG
Journal of Experimental Hematology 2019;27(4):1227-1231
OBJECTIVE:
To investigate the genetic carrier rate of thalassemia and its gene mutation types as well as the distribution characteristics among the people in Lingshui Li autonomous county of Hainan province, so as to provide the basis for making the prevention programs of thalassemia in administrative departments.
METHODS:
Samples were collected from couples undergoing premarital and pregestational screenings, in which the positive ones in preliminary screening were further tested by genetic diagnoses and the genotypes were analyzed.
RESULTS:
The rate of thalassemia gene carriers was 19.41% (274/1412) of the couples of childbearing age in Lingshui Li autonomous County of Hainan Province. In these carriers,α-thalassemia accounted for 83.21%(228/274), β-thalassemia for 8.03%(22/274), and both α-and β-thalassemia gene accounted for 8.76% (28/274).
CONCLUSION
The carrying rate of thalassemia gene in population Lingshui Li autonomous county of Hainan province is high, and its distribution has geographical characteristics,the major type is α-thalassemia. Blood screening and genetic diagnosis of thalassemia should be strengthened, and corresponding measures should be taken to reduce its gene frequency.
China
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Genetic Testing
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Genotype
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Heterozygote
;
Humans
;
alpha-Thalassemia
;
beta-Thalassemia
10.Analysis of hematological phenotype and genotype of Hb Q-Thailand in Fujian area.
Lingji CHEN ; Meihuan CHEN ; Min ZHANG ; Yan WANG ; Hailong HUANG ; Ying LI ; Liangpu XU
Chinese Journal of Medical Genetics 2019;36(8):761-764
OBJECTIVE:
To explore the hematological phenotype and genotype of hemoglobin Q-Thailand in Fujian area.
METHODS:
Genomic DNA was extracted from peripheral venous blood samples of patients. Suspected samples were screened by hematological parameters analysis and verified with DNA sequencing.
RESULTS:
In 35 patients suspected with Hb Q-Thailand, 20 were confirmed, which included one case compounded with heterozygous β mutation and one compounded with Hb New York.
CONCLUSION
Analysis of hematological phenotype and genotype of Hb Q-Thailand can faciliate genetic counseling for patients from Fujian area.
China
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Genotype
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Hemoglobins, Abnormal
;
genetics
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Heterozygote
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Humans
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Mutation
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Phenotype