1.Research progress in glucose-6-phosphate dehydrogenase in higher plants.
Dingqun YU ; Haoru TANG ; Yong ZHANG ; Ya LUO ; Zejing LIU
Chinese Journal of Biotechnology 2012;28(7):800-812
Glucose-6-phosphate dehydrogenase (G6PDH) catalyzes the first and rate-limiting step of the oxidative pentose phosphate pathway, existing in both cytosolic and plastidic compartments of higher plants. Its main function is to provide reducing power (NADPH) and pentose phosphates for reductive biosynthesis and maintenance of the redox state of the cell. In addition, the expression of this enzyme is related to different biotic and abiotic stresses. In this review, we analyzed the isoenzyme, regulation and biological function of G6PDH. Meanwhile, we summarized the progress work of G6PDH involved in stress resistance, gene cloning, enzyme-deficiency and cluster analysis. Problems should be solved were also discussed.
Amino Acid Sequence
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Glucosephosphate Dehydrogenase
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genetics
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metabolism
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physiology
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Isoenzymes
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Molecular Sequence Data
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Pentose Phosphate Pathway
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physiology
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Plants
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enzymology
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metabolism
2.Role of multi-omics technology in elucidating the pathogenesis of post-traumatic sepsis: a review
Hongsheng ZHENG ; Zigang ZHAO ; Haoru LIU ; Wanqi TANG ; Chen ZHANG ; Huaping LIANG ; Xia YANG
Chinese Journal of Trauma 2024;40(7):660-666
Sepsis is a syndrome of systemic inflammatory response in which the body′s response to infection is dysregulated, and is characterized by persistent infection, excessive inflammation and immunosuppression, etc. It often leads to organ dysfunction and can be life threatening, and also a common complication after trauma. The pathogenesis of post-traumatic sepsis is still unclear at present due to the complexity of its etiology, progression and prognosis. Multi-omics technology is a method to combine two or more single omics for comprehensive analysis, which can reveal the interaction network among the disease-associated molecules from multiple perspectives and aspects and is of great significance for the analysis of the pathogenesis of post-traumatic sepsis. To this end, the authors reviewed the research progress on the role of multi-omics technology in elucidating the pathogenesis of post-traumatic sepsis from the perspectives of genomics, transcriptomics, proteomics, metabolomics, single-cell transcriptomics and combination of multi-omics technologies, etc so as to provide a reference for the researches on post-traumatic sepsis.
3.Comparative metabolomics provides novel insights into the basis of petiole color differences in celery (Apiumgraveolens L.).
Mengyao LI ; Jie LI ; Haohan TAN ; Ya LUO ; Yong ZHANG ; Qing CHEN ; Yan WANG ; Yuanxiu LIN ; Yunting ZHANG ; Xiaorong WANG ; Haoru TANG
Journal of Zhejiang University. Science. B 2022;23(4):300-314
Plant metabolites are important for plant development and human health. Plants of celery (Apiumgraveolens L.) with different-colored petioles have been formed in the course of long-term evolution. However, the composition, content distribution, and mechanisms of accumulation of metabolites in different-colored petioles remain elusive. Using ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS), 1159 metabolites, including 100 lipids, 72 organic acids and derivatives, 83 phenylpropanoids and polyketides, and several alkaloids and terpenoids, were quantified in four celery cultivars, each with a different petiole color. There were significant differences in the types and contents of metabolites in celery with different-colored petioles, with the most striking difference between green celery and purple celery, followed by white celery and green celery. Annotated analysis of metabolic pathways showed that the metabolites of the different-colored petioles were significantly enriched in biosynthetic pathways such as anthocyanin, flavonoid, and chlorophyll pathways, suggesting that these metabolic pathways may play a key role in determining petiole color in celery. The content of chlorophyll in green celery was significantly higher than that in other celery cultivars, yellow celery was rich in carotenoids, and the content of anthocyanin in purple celery was significantly higher than that in the other celery cultivars. The color of the celery petioles was significantly correlated with the content of related metabolites. Among the four celery cultivars, the metabolites of the anthocyanin biosynthesis pathway were enriched in purple celery. The results of quantitative real-time polymerase chain reaction (qRT-PCR) suggested that the differential expression of the chalcone synthase (CHS) gene in the anthocyanin biosynthesis pathway might affect the biosynthesis of anthocyanin in celery. In addition, HPLC analysis revealed that cyanidin is the main pigment in purple celery. This study explored the differences in the types and contents of metabolites in celery cultivars with different-colored petioles and identified key substances for color formation. The results provide a theoretical basis and technical support for genetic improvement of celery petiole color.
Anthocyanins
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Apium/metabolism*
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Chlorophyll/metabolism*
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Color
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Gene Expression Regulation, Plant
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Humans
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Metabolomics
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Plant Proteins/genetics*
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Tandem Mass Spectrometry