1. Paired Box Gene Family: The Taxonomic Structure Distribution and Function
Hao-Ran GUAN ; Meng-Qi LI ; Ying-Lun HAN ; Hao-Ran GUAN ; Ying-Lun HAN ; Ying-Lun HAN
Chinese Journal of Biochemistry and Molecular Biology 2021;37(4):449-457
Paired box transcription factors (paired box, PAX) and their homologues found in a large number of vertebrates and invertebrates play a key role in many stages of embryonic development. The gene family gets its name because of its conserved paired domain, in addition to its octapeptide and homologous domain. According to the composition of the domain and sequence homology, the gene family is mainly divided into four subfamilies: PAX1 / 9 (PAX1, PAX9), PAX2 / 5 / 8 (PAX2, PAX5, PAX8), PAX3 / 7 (PAX3, PAX7), PAX4 / 6 (PAX4, PAX6). Each subfamily has different characteristic structures, such as PD-OP of PAX1 / 9 subfamily, PD-OP-PTHD of PAX2 / 5 / 8 subfamily, PD-OP-PTHD of PAX3 / 7 subfamily and PD and PTHD of PAX4 / 6 subfamily. Among them, the three members of the PAX family, PAX2 PAX4 and PAX6, play an important role in multiple stages of pancreatic development and differentiation, and also play a key role in regulating the synthesis and secretion of islet hormone. Understanding the original and differentiated roles of these transcription factors in pancreas will help finding potential treatment for diabetes. Furthermore, PAX1 / 9 families may serve as potential biomarkers for evaluation of tumor development and progression, such as the methylation levels of PAX1 and expression of PAX9 in tumor. PAX3 / 7 was transcription factors involved in the development of skeletal muscle. This paper reviewed the special and temporal expression of PAX genes in a wide variety of tumor and the function and structural abnormalities PAX gene were summarized in this paper.
2. Important Molecules in New Targeted Drug Research: Variable Lymphocyte Receptors
Zi-Hao YAN ; Jing-Jing LU ; Ying-Lun HAN ; Zi-Hao YAN ; Jing-Jing LU ; Ying-Lun HAN ; Ying-Lun HAN
Chinese Journal of Biochemistry and Molecular Biology 2021;37(1):29-36
Since the first discovery of lamprey variable lymphocyte receptors (VLRs) in 2004, the research and modification of VLRs have been very hot.VLRs have simple molecular structure, stable physical and chemical properties.VLRs can recognize a variety of antigens and have high affinity and strong specificity for proteins and polysaccharides, et al.In recent years, the recombinant molecules constructed by VLRs have been widely used in basic and application research in various fields.This paper reviews the latest application research of VLRs downstream in recent years.In tumor, VLRs can specifically and accurately identify carbohydrates and polysaccharides with only one functional group.It can be used as a sensitive anti-polysaccharide reagent to identify unique carbohydrate complexes on tumor cells and provide a new strategy for tumor targeted therapy.VLRs can also be combined with other classical therapies, such as modifying chimeric antigen receptors to express a synthetic receptor that redirects the targeted killing of T cells to the selected target.After recombination and modification, VLRs can also improve separation and purification of reagents.Research also indicates that VLRs play a role in aquatic diseases.These newly developed VLRs may be used as new reagents for identification, diagnosis and treatment.This paper describes the mechanism of VLRs diversity, and the relationship between VLRs with sugar biology and biomedical research, including the role of VLRs in improving separation and purification reagents, and the application of VLRs in the study of aquatic diseases.This review may provide reference for the application of VLR in disease drug research and development.
3.Internal fixation with AO distal humerus plates for the treatment of distal humeral fractures in elderly osteoporotic patients.
Ying-yao JI ; Li-cheng ZHENG ; Zhong-sheng HUANG ; Ke-Lun LI ; Zheng ZHAO ; Ju-han ZHENG ; Zhi-hao CHEN ; Jian-guang NI
China Journal of Orthopaedics and Traumatology 2011;24(8):681-683
OBJECTIVETo study the clinical effects of AO distal humerus plate (DHP) for the treatment of distal humeral fractures in elderly osteoporotic patients.
METHODSFrom September 2008 to January 2010, 18 elderly osteoporotic patients with distal humeral fractures were treated with open reduction and internal fixation with DHP. There were 3 males and 15 females, ranging in age from 62 to 83 years (averaged, 71.4 years). According to AO classification, 1 patient was Type A2, 3 patients were Type A3; 2 patients were Type B1, 2 patients were Type B2; 3 patients were Type C1, 4 patients were Type C2, 3 patients were Type C3. The surgical approaches were either bilateral or via olecranon process of ulna. Early mobilization was initiated after surgery. Functional results were evaluated according to the Mayo elbow performance score (MEPS).
RESULTSThe average duration of follow-up was 14.6 months (ranged from 11 to 24 months). All the patients had a complete healing of their fractures. There was no infection, hardware failure or loss of reduction after the operations. The average Mayo elbow performance score (MEPS) was (92.2 +/- 9.6) (65 to 100 points), among which the score of pain was (42.5 +/- 5.8) (30 to 45 points), the score of motion range was (19.2 +/- 1.9) (15 to 20 points), the score of stability was (9.2 +/- 1.9) (5 to 10 points), and the score of function was (21.4 +/- 2.9) (15 to 25 points). According to MEPS, 11 patients got excellent results, 5 good and 2 fair.
CONCLUSIONTreatment of distal humeral fractures in elderly osteoporotic patients with AO distal humeral plates can obtain immediate stabilization which facilitates early mobilization of the elbow.
Aged ; Aged, 80 and over ; Bone Plates ; Female ; Fracture Fixation, Internal ; methods ; Humans ; Humeral Fractures ; surgery ; Male ; Middle Aged ; Osteoporotic Fractures ; surgery
4.HCV infection in voluntary donors and its influence on recruitment of donors in Chongqing area.
Shu-Ming ZHAO ; Tian-Lun JIANG ; Ru-Qing LI ; Feng-Xiang GAO ; Ling LU ; Hao-Qiang ZHENG ; Jian HU ; Ya-Han FAN ; Bing LI ; Rui-Qing XIAO ; Khudoyakov YURY
Journal of Experimental Hematology 2008;16(3):676-680
Blood donor recruitment models have changed from paid donors to employer-organized donors and to voluntary donors in China. Reports on the hepatitis C virus (HCV) infection among voluntary blood donors in China have been rarely found at present. The prevalence of anti-HCV and genotypes among the first-time voluntary blood donors was investigated in Chongqing area of China. A total of 13,620 serum samples were collected from the first-time voluntary blood donors in Chongqing, China. Anti-HCV antibody was tested by ELISA. The Core/E2 region of HCV RNA from HCV seropositive samples was amplified by RT-PCR for genotyping. The results indicated that the prevalence of anti-HCV averaged 0.49% (67/13,620), and the highest rate (0.86%) was obtained in the group aged 40 to 49. A higher prevalence was observed among the more educated donors, and metropolitan donors. The ratios of following genotypes 1b, 2a, 3a and 3b were 4 (18%), 5 (23%), 9 (41%) and 4 (18%) in all the 22 samples respectively. Genotype 3 (3a and 3b) was the predominant genotype. In conclusion, the prevalence of anti-HCV was low among the population of voluntary blood donors in Chonqing area. The genotyping results showed the possibility of presence of druggies among the voluntary blood donors. Therefore, more attention should be paid to exclude those high-risk persons from the volunteers.
Blood Donors
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China
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epidemiology
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Genotype
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Hepacivirus
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genetics
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isolation & purification
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Hepatitis C
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epidemiology
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transmission
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Hepatitis C Antibodies
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blood
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Humans
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Incidence
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Seroepidemiologic Studies
5.Liver histological changes in chronic hepatitis B patients with elevated ALT less than 2 x ULN.
Jian-Chun XIAN ; Hong-Tao XU ; Yi-Lin HE ; Mei-Long SHEN ; Ya-Bao CHEN ; Li-Xin ZHANG ; Li XIAO ; Yang LI ; Li-Bin HAN ; Hao LI ; Lun-Gen LU
Chinese Journal of Hepatology 2011;19(6):431-435
OBJECTIVETo investigate the relevant factors of liver histological changes in chronic hepatitis B (CHB) patients with mildly elevated ALT and to explore the clinical values of these factors on anti-viral treatment.
METHODSA total of 152 CHB patients with mildly elevated ALT (less than 2 x ULN) who underwent liver biopsy were included in the study. Correlations between routine laboratory markers, liver histological inflammation grade and fibrosis stage were statistically assessed by Spearman correlation analysis, one-way ANOVA, area under the curve (AUC) of the receiver operating characteristic curves (ROC) and Logistic regression statistical analysis.
RESULTSAll patients in the study showed various hepatic histological damages. Among the 152 patients 50 (32.9%) were found with inflammation grade 1 (G1), 42 (27.6%) with G2, 46 (30.3%) with G3 and 14 (9.2%) with G4. 16 patients (10.5%) were found with fibrosis stage 2 (S2), 25 (16.5%) with S3 and 41 (27.0%) with S4. Routine laboratory markers Alb, BPC and WBC were significantly correlated with hepatic histological inflammation grade and fibrosis stage. Marked liver fibrosis and moderate to severe liver damage were significantly higher in patients aged more than 40 years as compared to those less than 40 years of age (P = 0.002, P = 0.010). The regression equation P = 1/[1+e-(9.36250-1625Alb-0.0234BPC)] was established with sensitivity and specificity of 83.3% and 65.0%, respectively.
CONCLUSION67.8% of CHB patients with mildly elevated ALT have significant injury to the liver tissue. CHB patients aged more than 40 years have a significant increase of marked liver fibrosis and moderate to severe liver damage. The regression equation is valuable to predict whether CHB patients need antiviral therapy or not.
Adolescent ; Adult ; Alanine Transaminase ; metabolism ; Female ; Hepatitis B, Chronic ; enzymology ; metabolism ; pathology ; Humans ; Liver ; pathology ; Liver Cirrhosis ; pathology ; Male ; Middle Aged ; Young Adult
6.Development and validation of a preoperative nomogram for predicting positive surgical margins after laparoscopic radical prostatectomy.
Xiao-Jun TIAN ; Zhao-Lun WANG ; Geng LI ; Shuang-Jie CAO ; Hao-Ran CUI ; Zong-Han LI ; Zhuo LIU ; Bo-Lun LI ; Lu-Lin MA ; Shen-Rong ZHUANG ; Qi-Yan XIAO
Chinese Medical Journal 2019;132(8):928-934
BACKGROUND:
Positive surgical margins are independent risk factor for biochemical recurrence, local recurrence, and distant metastasis after radical prostatectomy. However, limited predictive tools are available. This study aimed to develop and validate a preoperative nomogram for predicting positive surgical margins after laparoscopic radical prostatectomy (LRP).
METHODS:
From January 2010 to March 2016, a total of 418 patients who underwent LRP without receiving neoadjuvant therapy at Peking University Third Hospital were retrospectively involved in this study. Clinical and pathological results of each patient were collected for further analysis. Univariable and multivariable logistic regression (backward stepwise method) were used for the nomogram development. The concordance index (CI), calibration curve analysis and decision curve analysis were used to evaluate the performance of our model.
RESULTS:
Of 418 patients involved in this study, 142 patients (34.0%) had a positive surgical margin on final pathology. Based on the backward selection, four variables were included in the final multivariable regression model, including the percentage of positive cores in preoperative biopsy, clinical stage, free prostate specific antigen (fPSA)/total PSA (tPSA), and age. A nomogram was developed using these four variables. The concordance index (C-index) of the nomogram was 0.722 in the development cohort and 0.700 in the bootstrap validations. The bias-corrected calibration plot showed a limited departure from the ideal line with a mean absolute error of 2.0%. In decision curve analyses, the nomogram showed net benefits in the range from 0.2 to 0.7.
CONCLUSION
A nomogram to predict positive surgical margins after LRP was developed and validated, which could help urologists plan surgical procedures.
Aged
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Humans
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Laparoscopy
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methods
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Male
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Margins of Excision
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Middle Aged
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Nomograms
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Prostatectomy
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methods
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Prostatic Neoplasms
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surgery
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ROC Curve
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Retrospective Studies
7.Identification of Hypertension Subgroups through Topological Analysis of Symptom-Based Patient Similarity.
Yi-Fei WANG ; Jing-Jing WANG ; Wei PENG ; Yong-Hao REN ; Chao GAO ; Yun-Lun LI ; Rui WANG ; Xiao-Feng WANG ; Song-Jun HAN ; Jia-Yu LYU ; Jia-Ming HUAN ; Cui CHEN ; Hai-Yan WANG ; Zi-Xin SHU ; Xue-Zhong ZHOU ; Wei LI
Chinese journal of integrative medicine 2021;27(9):656-665
OBJECTIVE:
To obtain the subtypes of the clinical hypertension population based on symptoms and to explore the relationship between hypertension and comorbidities.
METHODS:
The data set was collected from the Chinese medicine (CM) electronic medical records of 33,458 hypertension inpatients in the Affiliated Hospital of Shandong University of Traditional Chinese Medicine between July 2014 and May 2017. Then, a hypertension disease comorbidity network (HDCN) was built to investigate the complicated associations between hypertension and their comorbidities. Moreover, a hypertension patient similarity network (HPSN) was constructed with patients' shared symptoms, and 7 main hypertension patient subgroups were identified from HPSN with a community detection method to exhibit the characteristics of clinical phenotypes and molecular mechanisms. In addition, the significant symptoms, diseases, CM syndromes and pathways of each main patient subgroup were obtained by enrichment analysis.
RESULTS:
The significant symptoms and diseases of these patient subgroups were associated with different damaged target organs of hypertension. Additionally, the specific phenotypic features (symptoms, diseases, and CM syndromes) were consistent with specific molecular features (pathways) in the same patient subgroup.
CONCLUSION
The utility and comprehensiveness of disease classification based on community detection of patient networks using shared CM symptom phenotypes showed the importance of hypertension patient subgroups.
8.The role of continuous 48 h oropharyngeal pH monitoring in the diagnosis of laryngopharyngeal reflux disease.
Zhe Zhe SUN ; Gang WANG ; Lei WANG ; Ge Lin LI ; Hong Dan LIU ; Bao Wei LI ; Hao Lun HAN ; Ying ZHOU ; Yi Yan ZHANG ; Xiao Li ZHANG ; Wei WU
Chinese Journal of Otorhinolaryngology Head and Neck Surgery 2022;57(10):1191-1196
Objective: To investigate the daily variation of LPR and the significance of 48-hour oropharyngeal pH monitoring in the diagnosis of LPRD. Methods: 72 subjects with suspected LPRD who were treated in our department from June 2018 to June 2021 were included. All patients were hospitalized to complete continuous 48-hour oropharyngeal Dx-pH monitoring. The consistency of Ryan index and W index and the correlation of various reflux parameters between the first and second 24-hour were compared. SPSS 24.0 was used for statistical analysis. Results: All 72 subjects successfully completed 48-hour oropharyngeal Dx-pH monitoring. Ryan index was positive in 11 cases (15.2%) in the first 24-hour, in 17 cases (23.6%) in the second 24-hour, in 5 cases (6.9%) both first and second, and in 23 cases (31.9%) in either 24-hour, Kappa=0.211 (P=0.064), 18 cases (25%) had inconsistent results of the first 24-hour and the second 24-hour, and there was no significant difference in the positive rate between the first and second (P=0.234). The number of positive cases in 48-hour monitoring increased by 109.1% compared with 24-hour monitoring.For W index, 49 cases (68.1%) were positive in the first 24-hourf 53 cases (73.6%) were positive in the second 24-hour, 42 cases (58.3%) were positive both first and second, and 58 cases (80.6%) were positive in either 24-hour, Kappa=0.477 (P<0.001), 16 cases (22.2%) had inconsistent results of the first and second, and there was no significant difference in the positive rate between the first and second (P=0.804). The number of positive cases in 48-hour monitoring increased by 18.4% compared with 24-hour monitoring. There was no significant difference in all the reflux parameters of first and second (P>0.05). The correlation comparison showed that the correlation of various reflux parameters in the upright position was lower than that in the supine position. Conclusion: Laryngeal reflux has daily variability. Extending the monitoring time of Dx-pH to 48-hour can help reduce the missed diagnosis caused by daily variability; the use of W index can reduce the influence of daily variability on the diagnostic results of LPRD.
Humans
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Laryngopharyngeal Reflux/diagnosis*
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Hydrogen-Ion Concentration
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Hypopharynx
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Larynx
9.Consensus by Chinese Expert Panel on-Resistant and-Persistent Infection.
Man-Li QI ; Yuan-Li GUO ; Qian-Qiu WANG ; Xiang-Sheng CHEN ; Jian-De HAN ; Xiao-Hong SU ; Wen-Hui LUN ; Hao CHENG ; Jin-Hua XU ; Hong-Qing TIAN ; Li CHEN ; Zhi-Yuan YAO ; Wen-Li FENG ; Juan JIANG ; Ping-Yu ZHOU ; Xian-Biao ZOU ; Hong-Hui XU ; Wei-Min SHI ; Jun LIU ; Lin ZHU ; Quan-Zhong LIU
Chinese Medical Journal 2017;130(23):2852-2856