1.Microbiome of Genitourinary Tumors: Especially in Prostate Cancer and Kidney Cancer
Kyungchan MIN ; Seok Joong YUN ; Hansoo PARK ; Yun-Sok HA
Korean Journal of Urological Oncology 2021;19(3):136-147
Human body contains diverse microbes. Different microbes are identified at different organs. Urine was thought as sterile, but according to progression in important technologies like 16S rRNA gene sequencing and expanded quantitative urine culture, it is known that diverse microbes exist in genitourinary tract. Microbiome contains the microbes and surrounding microenvironments. In addition to urologic difficulties like interstitial cystitis or chronic prostatitis, malignancies are thought to be related to microbiomes. In this review, we summarized several studies in urologic malignancies, especially prostate cancer and kidney cancer.
2.Microbiome of Genitourinary Tumors: Especially in Prostate Cancer and Kidney Cancer
Kyungchan MIN ; Seok Joong YUN ; Hansoo PARK ; Yun-Sok HA
Korean Journal of Urological Oncology 2021;19(3):136-147
Human body contains diverse microbes. Different microbes are identified at different organs. Urine was thought as sterile, but according to progression in important technologies like 16S rRNA gene sequencing and expanded quantitative urine culture, it is known that diverse microbes exist in genitourinary tract. Microbiome contains the microbes and surrounding microenvironments. In addition to urologic difficulties like interstitial cystitis or chronic prostatitis, malignancies are thought to be related to microbiomes. In this review, we summarized several studies in urologic malignancies, especially prostate cancer and kidney cancer.
3.Microengineered Platforms for Co-Cultured Mesenchymal Stem Cells towards Vascularized Bone Tissue Engineering.
Hyeryeon PARK ; Dong Jin LIM ; Minhee SUNG ; Soo Hong LEE ; Dokyun NA ; Hansoo PARK
Tissue Engineering and Regenerative Medicine 2016;13(5):465-474
Bone defects are common disease requiring thorough treatments since the bone is a complex vascularized tissue that is composed of multiple cell types embedded within an intricate extracellular matrix (ECM). For past decades, tissue engineering using cells, proteins, and scaffolds has been suggested as one of the promising approaches for effective bone regeneration. Recently, many researchers have been interested in designing effective platform for tissue regeneration by orchestrating factors involved in microenvironment around tissues. Among factors affecting bone formation, vascularization during bone development and after minor insults via endochondral and intramembranous ossification is especially critical for the long-term support for functional bone. In order to create vascularized bone constructs, the interactions between human mesenchymal stem cells (MSCs) and endothelial cells (ECs) have been investigated using both direct and indirect co-culture studies. Recently, various culture methods including micropatterning techniques, three dimensional scaffolds, and microfluidics have been developed to create micro-engineered platforms that mimic the nature of vascularized bone formation, leading to the creation of functional bone structures. This review focuses on MSCs co-cultured with endothelial cells and micro-engineered platforms to determine the underlying interplay between co-cultured MSCs and vascularized bone constructs, which is ultimately necessary for adequate regeneration of bone defects.
Bone and Bones*
;
Bone Development
;
Bone Regeneration
;
Coculture Techniques
;
Endothelial Cells
;
Extracellular Matrix
;
Humans
;
Mesenchymal Stromal Cells*
;
Microfluidics
;
Osteogenesis
;
Regeneration
;
Stem Cells
;
Tissue Engineering
4.Association Between Local Government Social Expenditures and Mortality Levels in Korea.
Hansoo KO ; Jinseob KIM ; Donggil KIM ; Saerom KIM ; Yukyung PARK ; Chang Yup KIM
Journal of Preventive Medicine and Public Health 2013;46(1):1-9
OBJECTIVES: We examined the association between social expenditures of the local government and the mortality level in Korea, 2004 to 2010. METHODS: We used social expenditure data of 230 local governments during 2004 to 2010 from the Social Expenditure Database prepared by the Korean Institute for Health and Social Affairs. Fixed effect panel data regression analysis was adopted to look for associations between social expenditures and age-standardized mortality and the premature death index. RESULTS: Social expenditures of local governments per capita was not significantly associated with standardized mortality but was associated with the premature death index (decline of 1.0 [for males] and 0.5 [for females] for each expenditure of 100 000 Korean won, i.e., approximately 100 US dollar). As an index of the voluntary effort of local governments, the self-managed project ratio was associated with a decline in the standardized mortality in females (decline of 0.4 for each increase of 1%). The share of health care was not significant. CONCLUSIONS: There were associations between social expenditures of the local government and the mortality level in Korea. In particular, social expenditures per capita were significantly associated with a decline in premature death. However, the voluntary efforts of local governments were not significantly related to the decline in premature death.
Databases, Factual
;
Female
;
Financing, Government/*economics
;
Health Expenditures/*statistics & numerical data
;
Humans
;
Local Government
;
Male
;
Mortality/*trends
;
Mortality, Premature/*trends
;
Regression Analysis
;
Republic of Korea
5.A Case of Endobronchial Aspergillosis Completely Obstructing Lobar Bronchus.
Byong Jo PARK ; Young Ki KIM ; Hansoo KIM ; Yee Hyung KIM ; Hyang Ie LEE ; Hong Mo KANG ; Cheon Woong CHOI ; Jee Hong YOO ; Myong Jae PARK
Tuberculosis and Respiratory Diseases 2005;59(3):311-314
Pulmonary aspergillosis may present with three different features, according to the immune status of the host. These forms are invasive aspergillosis, allergic bronchopulmonary aspergillosis (ABPA) or aspergilloma. Bronchial involvement is an uncommon type of invasive pulmonary aspergillosis. We encountered an unusual case of an endobronchial aspergillosis that completely obstructed the left upper lobe, which was initially thought to be lung cancer. We report this case along with a review of the relevant literature.
Aspergillosis*
;
Aspergillosis, Allergic Bronchopulmonary
;
Bronchi*
;
Invasive Pulmonary Aspergillosis
;
Lung Neoplasms
;
Pulmonary Aspergillosis
6.Higher mitochondrial DNA copy number is associated with lower prevalence of microalbuminuria.
Jung Eun LEE ; Hansoo PARK ; Young Seok JU ; Minhye KWAK ; Jong Il KIM ; Ha Young OH ; Jeong Sun SEO
Experimental & Molecular Medicine 2009;41(4):253-258
It has been suggested that mitochondrial dysfunction contributes to the initiation and development of atherosclerosis and cardiovascular disease. We examined the association between mitochondrial DNA (mtDNA) copy number and microalbuminuria in a cross-sectional community-based study. We measured peripheral blood mtDNA copy number in 694 adults without chronic kidney disease by a real-time PCR method. The overall prevalence of microalbuminuria (defined as an albumin creatinine ratio of 30 to 299 mg/g) was 4.5%. The prevalence of microalbuminuria decreased progressively from the lower to the upper quartiles of mtDNA copy number (6.9%, 5.7%, 2.9%, and 2.3% in quartiles 1, 2, 3, and 4, respectively, P = 0.017 for trend). Multiple logistic regression models showed that the quartile of mtDNA copy number was independently associated with the prevalence of microalbuminuria (P = 0.01 for trend). Compared with the lowest quartile, the highest quartile had an odds ratio of 0.22 for microalbuminuria (95% confidence interval, 0.05 to 0.87; P = 0.03). Higher mtDNA copy number was associated with the lower prevalence of microalbuminuria in a community-based population.
Adult
;
Albuminuria/blood/*epidemiology/*genetics
;
Cross-Sectional Studies
;
DNA, Mitochondrial/blood/*genetics
;
Female
;
*Gene Dosage
;
Humans
;
Male
;
Middle Aged
;
Regression Analysis
;
Young Adult
7.Heritability and linkage study on heart rates in a Mongolian population.
Bayasgalan GOMBOJAV ; Hansoo PARK ; Jong Il KIM ; Young Seok JU ; Joohon SUNG ; Sung Il CHO ; Mi Kyeong LEE ; Heechoul OHRR ; Janchiv RADNAABAZAR ; Jeong Sun SEO
Experimental & Molecular Medicine 2008;40(5):558-564
Elevated heart rate has been proposed as an independent risk factor for cardiovascular diseases, but their interrelationships are not well understood. In this study, we performed a genome-wide linkage scan in 1,026 individuals (mean age 30.6 years, 54.5% women) from 73 extended families of Mongolia and determined quantitative trait loci that influence heart rate. The DNA samples were genotyped using deCODE 1,039 microsatellite markers for 3 cM density genome-wide linkage scan. Correlation analysis was carried out to evaluate the correlation of the covariates and the heart rate. T-tests of the heart rate were also performed on sex, smoking and alcohol intake. Consequently, this model was used in a nonparametric genome-wide linkage analysis using variance component model to create a multipoint logarithm of odds (LOD) score and a corresponding P value. In the adjusted model, the heritability of heart rate was estimated as 0.32 (P<.0001) and a maximum multipoint LOD score of 2.03 was observed in 77 cM region at chromosome 18. The second largest LOD score of 1.52 was seen on chromosome 5 at 216 cM. Genes located on the specified locations in chromosomes 5 and 18 may be involved in the regulation of heart rate.
Adolescent
;
Adult
;
Chromosome Mapping/*methods
;
Female
;
Genetics, Population
;
Genome, Human/*genetics
;
Genome-Wide Association Study/methods
;
*Heart Rate
;
Humans
;
Linkage (Genetics)
;
Male
;
Middle Aged
;
Mongolia
;
Quantitative Trait Loci/*genetics
;
Young Adult
8.Genome-wide Linkage Study for Plasma HDL Cholesterol Level in an Isolated Population of Mongolia.
Hansoo PARK ; Jong Il KIM ; Sung Il CHO ; Joohon SUNG ; Hyung Lae KIM ; Young Seok JU ; Gombojav BAYASGALAN ; Mi Kyeong LEE ; Jeong Sun SEO
Genomics & Informatics 2008;6(1):8-13
High-density lipoprotein (HDL) whose primary role is to transport cholesterol from peripheral tissues to the liver, is associated with the incidence of coronary heart disease. We analyzed HDL cholesterol levels in a genetically isolated population of extended Mongolian families. A total of 1002 individuals (54.5% women) from 95 families were enrolled. After genotyping by use of 1000 microsatellite markers, we performed a genome-wide linkage search with variance component analysis. The estimated heritability of HDL cholesterol was 0.45, revealing that HDL cholesterol was under significant genetic influence. We found peak evidence of linkage (LOD score=1.88) for HDL cholesterol level on chromosome 6(nearest marker D6S1660) and potential evidences for linkage on chromosomes 1, 12 and 19 with the LOD scores of 1.32, 1.44 and 1.14, respectively. These results should pave the way for the discovery of the relevant genes by fine mapping and association analysis.
Cholesterol
;
Cholesterol, HDL
;
Coronary Disease
;
Humans
;
Incidence
;
Lipoproteins
;
Liver
;
Lod Score
;
Microsatellite Repeats
;
Mongolia
;
Plasma
9.Genome-wide Linkage Study for Plasma HDL Cholesterol Level in an Isolated Population of Mongolia.
Hansoo PARK ; Jong Il KIM ; Sung Il CHO ; Joohon SUNG ; Hyung Lae KIM ; Young Seok JU ; Gombojav BAYASGALAN ; Mi Kyeong LEE ; Jeong Sun SEO
Genomics & Informatics 2008;6(1):8-13
High-density lipoprotein (HDL) whose primary role is to transport cholesterol from peripheral tissues to the liver, is associated with the incidence of coronary heart disease. We analyzed HDL cholesterol levels in a genetically isolated population of extended Mongolian families. A total of 1002 individuals (54.5% women) from 95 families were enrolled. After genotyping by use of 1000 microsatellite markers, we performed a genome-wide linkage search with variance component analysis. The estimated heritability of HDL cholesterol was 0.45, revealing that HDL cholesterol was under significant genetic influence. We found peak evidence of linkage (LOD score=1.88) for HDL cholesterol level on chromosome 6(nearest marker D6S1660) and potential evidences for linkage on chromosomes 1, 12 and 19 with the LOD scores of 1.32, 1.44 and 1.14, respectively. These results should pave the way for the discovery of the relevant genes by fine mapping and association analysis.
Cholesterol
;
Cholesterol, HDL
;
Coronary Disease
;
Humans
;
Incidence
;
Lipoproteins
;
Liver
;
Lod Score
;
Microsatellite Repeats
;
Mongolia
;
Plasma
10.SIRT1 promotes DNA repair activity and deacetylation of Ku70.
Jaemin JEONG ; Kyungmi JUHN ; Hansoo LEE ; Sang Hoon KIM ; Bon Hong MIN ; Kyung Mi LEE ; Myung Haeng CHO ; Gil Hong PARK ; Kee Ho LEE
Experimental & Molecular Medicine 2007;39(1):8-13
Human SIRT1 controls various physiological responses including cell fate, stress, and aging, through deacetylation of its specific substrate protein. In processing DNA damage signaling, SIRT1 attenuates a cellular apoptotic response by deacetylation of p53 tumor suppressor. The present study shows that, upon exposure to radiation, SIRT1 could enhance DNA repair capacity and deacetylation of repair protein Ku70. Ectopically over-expressed SIRT1 resulted in the increase of repair of DNA strand breakages produced by radiation. On the other hand, repression of endogenous SIRT1 expression by SIRT1 siRNA led to the decrease of this repair activity, indicating that SIRT1 can regulate DNA repair capacity of cells with DNA strand breaks. In addition, we found that SIRT1 physically complexed with repair protein Ku70, leading to subsequent deacetylation. The dominant-negative SIRT1, a catalytically inactive form, did not induce deacetylation of Ku70 protein as well as increase of DNA repair capacity. These observations suggest that SIRT1 modulates DNA repair activity, which could be regulated by the acetylation status of repair protein Ku70 following DNA damage.
Sirtuins/genetics/*metabolism
;
RNA, Small Interfering/genetics
;
Humans
;
DNA-Binding Proteins/*metabolism
;
DNA Repair/*genetics
;
DNA/*genetics
;
Cell Line
;
Antigens, Nuclear/*metabolism
;
Acetylation