1.Variant of Helicobacter pylori CagA proteins induce different magnitude of morphological changes in gastric epithelial cells
Hanafiah Alfizah ; Mohamed Ramelah
The Malaysian Journal of Pathology 2012;34(1):29-34
Infection with Helicobacter pylori cagA-positive strains is associated with gastroduodenal diseases.
The CagA protein is injected into gastric epithelial cells and supposedly induces morphological changes termed the ‘hummingbird phenotype’, which is associated with scattering and increased cell motility. The molecular mechanisms leading to the CagA-dependent morphological changes are only partially known. The present study was carried out to investigate the effect of CagA variants
on the magnitude of gastric epithelial cell morphological changes. Recombinant 3’ terminal domains of cagA were cloned and expressed in a gastric epithelial cell line and the hummingbird phenotype was quantifi ed by microscopy. The 3’ region of the cagA gene of Malaysian H. pylori
isolates showed six sub-genotypes that differed in the structural organization of the EPIYA repeat sequences. The percentage of hummingbird cells induced by CagA increased with duration of transfection. The hummingbird phenotype was observed to be more pronounced when CagA with
4 EPIYA motifs rather than 3 or 2 EPIYA motifs was produced. The activity of different CagA variants in the induction of the hummingbird phenotype in gastric epithelial cells depends at least in part on EPIYA motif variability. The difference in CagA genotypes might infl uence the potential of individual CagAs to cause morphological changes in host cells. Depending on the relative exposure of cells to CagA genotypes, this may contribute to the various disease outcomes caused
by H. pylori infection in different individuals.
2.Molecular Detection Of The New Delhi Metallo-B-Lactamase-1 Gene In Enterobacteriaceae Isolates In A Tertiary Medical Centre
Nor Zanariah Zainol Abidin ; Anita Sulong ; Hanafiah Alfizah
The Malaysian Journal of Pathology 2015;37(3):227-232
Background: New Delhi metallo-b-lactamase-1 (NDM-1) is a relatively recent carbapenemase
enzyme that inactivates all b-lactam antibiotics with the exception of aztreonam. This study aims
to ascertain the baseline prevalence and antibiotic susceptibility patterns of NDM-1-producing
Enterobacteriaceae in a tertiary medical center in Malaysia. Methods: Over a period of one year,
all Enterobacteriaceae isolates from all clinical specimens with reduced susceptibility to at least
one carbapenem and resistance to at least one third generation cephalosporin were subjected to
antibiotic susceptibility testing by disk diffusion and molecular detection of the NDM-1 gene by
single-target PCR followed by gel electrophoresis. Results: A total of 13,098 Enterobacteriaceae
isolates were screened and 63 (0.48%) had reduced susceptibility to at least one carbapenem. Of
this 63, 18 (29%) were NDM-1-positive. Of this 18, 16 (89.0%) were Klebsiella pneumoniae, one
(5.5%) was Escherichia coli and one (5.5%) was Klebsiella ornithinolytica. Reduced susceptibility
to at least one aminoglycoside was seen in 17 (94%) of the NDM-1-positive isolates. All 18 (100%)
had reduced susceptibility to ertapenem and were resistant to all the second and third generation
cephalosporin antibiotics tested. Conclusion: The prevalence of NDM-1-producing Enterobacteriaceae
among all the Enterobacteriaceae isolates in our institution is low (0.14%) and screening for the
NDM-1 gene is best performed using ertapenem-impregnated disks.
Molecular Detection Of The New Delhi Metallo-B-Lactamase-1 Gene In Enterobacteriaceae Isolates In A Tertiary Medical Centre
3.Distribution of gastric adenocarcinoma subtypes in different ethnicities in Kuala Lumpur, Malaysia
Asif SUKRI ; Alfizah HANAFIAH ; Nik Ritza KOSAI ; Mustafa Mohamed TAHER ; Isa Mohamed ROSE
The Malaysian Journal of Pathology 2017;39(3):235-242
The multiracial population in Malaysia has lived together for almost a century, however, the risk ofgastric cancer among them varies. This study aimed to determine the distribution of different gastricadenocarcinoma subtypes and Helicobacter pylori infection status among gastric adenocarcinomapatients. Patients with gastric adenocarcinoma were enrolled from November 2013 to June 2015.Blood samples were collected for detection of H. pylori using ELISA method. Gastric adenocarcinomacases were more prevalent in the Chinese (52.8%), followed by the Malays (41.7%) and leastprevalent in the Indians (5.6%). Gastric adenocarcinoma located in the cardia was significantly moreprevalent in the Malays (66.7%) compared to the Chinese (26.3%), whereas non-cardia cancer wasdiagnosed more in the Chinese (73.7%) compared to the Malays (33.3%) [P = 0.019; OR = 5.6, 95CI: 1.27 to 24.64]. The Malays also had significantly higher prevalence of gastric tumour locatedat the cardia or fundus than other gastric sites compared to the Chinese (P = 0.002; OR: 11.2, 95%CI: 2.2 to 56.9). Among the cardia gastric cancer patients, 55.6% of the Malays showed intestinalhistological subtype, whereas all the Chinese had the diffuse subtype. More than half of the patients(55.3%) with gastric adenocarcinoma were positive for H. pylori infection and among them, 66.7%were Chinese patients. The risk of gastric adenocarcinoma in our population is different amongethnicities. Further studies on host factors are needed as it might play an important role in gastriccancer susceptibility in our population.
4.The prevalence of Helicobacter pylori primary resistance towards antibiotics using an Epsilometer-test method
Noraziah Mohamad Zin ; Alfizah Hanafiah ; Mohd Badrin Hanizam Abdul Rahim ; Muhamad Mazlan Kamaruddin ; Nur Faizah Abu Bakar
Malaysian Journal of Microbiology 2018;14(6):596-600
Abstract
An epsilometer-test method was used to determine MIC values of several antibiotics against 29 Helicobacter pylori isolated from gastric antrum of dyspepsia patients. Isolates with resistance towards antibiotics were 6.9% -65.5% but these were tetracycline-sensitive. Eight isolates showed multi-resistance towards two antimicrobial agents. The high resistance strains towards metronidazole is alarming.