1.Establishment of delta block matching technique.
Qin-Feng LÜ ; Wei ZHANG ; Fa-Ming ZHU ; Li-Xing YAN
Journal of Experimental Hematology 2006;14(2):366-368
To establish delta block HLA-matching technique, DNA was extracted from whole blood by salting-out method, delta block was amplified by polymerase chain reaction (PCR), and PCR product was detected by GeneScan. The results showed that delta block had polymorphism in 104 samples without sibship of the Han people from Zhejiang province. The range of DNA fragment length was 81-393 bp and could be divided into 4 groups: 81-118 bp, 140-175 bp, 217-301 bp, 340-393 bp. The numbers of DNA fragments were 6-32. It is concluded that the method of delta block matching is reliable and can be applied to select donors for the patients to be transplanted. It is the first time to get delta block data of the Han people in China.
HLA-A Antigens
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genetics
;
immunology
;
HLA-B Antigens
;
genetics
;
immunology
;
HLA-DQ Antigens
;
genetics
;
immunology
;
HLA-DR Antigens
;
genetics
;
immunology
;
HLA-DRB1 Chains
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Hematopoietic Stem Cell Transplantation
;
Histocompatibility Testing
;
methods
;
Humans
2.Probability of high resolution full match for human leukocyte antigen loci in unrelated donors and recipients with low resolution match.
Wei ZHANG ; Fa-Ming ZHU ; Yan-Min HE ; Su-Dan TAO ; Wei WANG ; Jun-Jun HE ; Hang-Jun LÜ ; Li-Xing YAN
Journal of Experimental Hematology 2010;18(6):1617-1620
This study was aimed to analyze the possibility of high resolution matching for human leukocyte antigen (HLA) loci in unrelated donor-recipient pair with low resolution match in HLA-A, -B, -DRB1 loci. Samples were genotyped for HLA-A, -B, -C, -DRB1 and -DQB1 by polymerase chain reaction sequence based typing (PCR-SBT). The results showed that the total number of patients and the donors were 166 and 274. 97 (58.43%) patients were matched for 1 donor and 47 (28.31%) patients were matched for 2 donors at low resolution level; among 274 donor-recipient pairs, HLA-A, -B, -C, -DRB1 and -DQB1 loci matching for 6/10, 7/10, 8/10, 9/10 and 10/10 were 32 (11.68%), 54 (19.71%), 62 (22.63%), 49 (17.88%) and 48 (17.52%) respectively; there were mismatch in HLA-A, -B, -C, -DRB1 and -DQB1 loci, and the most mismatch was in HLA-C locus. The number of alleles of HLA-A, -B, -C, -DRB1 and -DQB1 loci were 23, 46, 21, 30 and 17 respectively in the donors. The alleles number HLA-A, -B, -C, -DRB1 and -DQB1 loci were 20, 40, 22, 29 and 16 respectively in the patients; the haplotype number of HLA loci were 311 in the donors and 224 in the patients. The high frequency of haplotype was A*02:07-B*46:01-C*01:02-DRB1*09:01:02-DQB1*03:03 (5.63% and 6.88%). It is concluded that the probability of high resolution mismatch of HLA loci is high in unrelated donor-recipient pairs with low resolution match in HLA-A, -B, -DRB1 loci.
Alleles
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Gene Frequency
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Genotype
;
HLA Antigens
;
genetics
;
immunology
;
HLA-A Antigens
;
genetics
;
immunology
;
HLA-B Antigens
;
genetics
;
immunology
;
HLA-C Antigens
;
genetics
;
immunology
;
HLA-DQ Antigens
;
genetics
;
immunology
;
HLA-DQ beta-Chains
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HLA-DR Antigens
;
genetics
;
immunology
;
HLA-DRB1 Chains
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Haplotypes
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Hematopoietic Stem Cell Transplantation
;
methods
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Histocompatibility Testing
;
methods
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Humans
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Probability
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Tissue Donors
3.The HLA Antigen and Leprosy in Korea.
Se Jong KIM ; In Hong CHOI ; Joo Deuk KIM
Yonsei Medical Journal 1985;26(2):154-158
To investigate the genetic factors in Koreans with leprosy, 157 unrelated leprosy patients have been typed for HLA antigens, and compared with 162 healthy controls. The patient group consisted of 124 with lepromatous leprosy and 33 with tuberculoid leprosy. HLA-A11 was found to be increased in lepromatous leprosy (p=0.0005). HLA-Aw33 was found to be increased in both lepromatous leprosy (p = 0.0002) and tuberculoid leprosy (p = 0.005). HLA-Cw5 was found to be decreased in lepromatous leprosy (p = 0.009). Frequencied of HLA-B antigens did not differ significantly between the leprosy patients and the healthy controls.
HLA Antigens/analysis*
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Human
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Korea
;
Leprosy/genetics
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Leprosy/immunology*
;
Phenotype
4.Ambiguous allele combinations in the HLA high resolution genotyping--review.
Journal of Experimental Hematology 2010;18(5):1345-1349
Human lymphocyte antigen (HLA) is the most complicated human dominant polymorphic genetic system. Accurate HLA genotyping is clinically important for hematopoietic stem cell (HSC) transplantation, also important for research on many human diseases. Polymerase chain reaction-sequence based typing (PCR-SBT) provides the highest resolution level and defines new alleles, so it is widely used for HLA typing. One great disadvantage of PCR-SBT method is the fact that it cannot resolve sequences of heterozygous samples in diploid genomes, leading to ambiguous typing results which make much trouble to the accurate definition of HLA genotype. This article reviewed the occurring reasons and solution method of ambiguous allele combinations in the HLA high resolution genotyping as well as the research prospect in this field.
Genotype
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HLA Antigens
;
genetics
;
immunology
;
Histocompatibility Testing
;
Humans
5.Is There Any Relationship Between Human Leucocyte Antigen Class II and Chronic Urticaria? (Chronic Urticaria and HLA Class II).
Pinar OZTAS ; Meltem ONDER ; Sevim GONEN ; Murat Orhan OZTAS ; Oguz SOYLEMEZOGLU
Yonsei Medical Journal 2004;45(3):392-395
Human Leukocyte Antigen (HLA) typing of large groups of patients with various autoimmune diseases has demonstrated that some HLA alleles occur at higher frequencies in specific diseases than in the general population. Chronic urticaria has been shown to have an autoimmune basis by a previous study which found an association between chronic urticaria and specific HLA groups. We investigated the HLA subtypes of Turkish chronic urticaria patients. For this purpose 42 Turkish patients with chronic urticaria and 115 healthy controls were typed for HLA-DR and DQ by PCR-SSP (Polymerase Chain Reaction Sequence Specific Primers) low resolution DNA technique. We found an increased frequency of DR4 (42.9%, p=0.01) in chronic urticaria patients in comparison with that in healthy controls. This study supports the hypothesis that HLA alleles may be involved in the pathogenesis of chronic urticaria and that they appear to be directly involved in the initiation of the immune response.
Chronic Disease
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HLA-DQ Antigens/genetics
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HLA-DR Antigens/genetics
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HLA-DR4 Antigen/genetics
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Histocompatibility Antigens Class II/*genetics
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*Histocompatibility Testing
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Human
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Urticaria/*genetics/*immunology
6.Analysis of HLA alleles polymorphism in Chinese patients with primary biliary cirrhosis.
Hai-ying LIU ; An-mei DENG ; Jian ZHANG ; Ye ZHOU ; Ding-kang YAO ; Fang SHEN ; Xiao-qing TU ; Lie-ying FAN ; Ren-qian ZHONG
Chinese Journal of Hepatology 2005;13(6):410-413
OBJECTIVETo investigate the frequencies of human leuckocyte antigens (HLA) -A, B and DRB1 alleles in Chinese patients with primary biliary cirrhosis (PBC) using polymerase chain reaction-based techniques, and to assess the correlation of HLA molecules with other clinical and laboratory profiles.
METHODSGenotyping of HLA-A, B, and DRB1 were performed in 65 well-characterized patients with primary biliary cirrhosis and 431 healthy controls with PCR amplification with sequence-specific primers (PCR-SSP).
RESULTSThe frequency of DRB1*0701 was increased to 29.2% compared with 13.9% in the controls (PC < 0.05, OR = 2.55, 95% CI: 1.4 approximately 4.6). No association was found with HLA-DRB1*08 which had been constantly reported. The A*2 allele (53.8%) was more frequent in the PBC patient group but without a significant statistical difference. The frequencies for the other A, B and DRB1 alleles were similar between patients and healthy controls. There was no difference between patients with or without DRB1*0701 in some clinical and laboratory profiles.
CONCLUSIONSusceptibility to primary biliary cirrhosis in Chinese is associated with DRB1*0701 allele and differs from people in North America, South America, North Europe and even in Japan, but the association is not restricted to any particular subgroup of patients. Valine at position 78 of HLA DRbeta1 may play an important role in the pathogenesis of primary biliary cirrhosis.
Adult ; Aged ; Aged, 80 and over ; Alleles ; Female ; HLA Antigens ; genetics ; HLA-A Antigens ; genetics ; HLA-B Antigens ; genetics ; HLA-DR Antigens ; genetics ; Humans ; Liver Cirrhosis, Biliary ; genetics ; immunology ; Male ; Middle Aged ; Polymorphism, Genetic
7.Statistical analysis of 4000 umbilical cord blood units preserved in shandong cord blood bank.
Jie PAN ; Shen-Li ZHOU ; Bai-Jun SHEN ; Wen-Ying YAN ; Ri XU ; Dao-Gang SONG
Journal of Experimental Hematology 2002;10(3):257-260
The current study analyzed the data of 4 000 umbilical cord blood (UCB) units collected in Shandong Cord Blood Bank from the end of 1999 to March 2001. The averages of nucleated cells and CD34(+) cells were more than 1.2 x 10(9) and 3.9 x 10(6) per UCB unit respectively, and more than 1.5 x 10(9) nucleated cells per UCB unit were obtained in 768 UCB units. These UCB units are suitable for transplantation in patients with a body weight greater than 40 kg. The analysis of HLA gene frequency showed that A2, A24, A11, B13, B51, DR15, DR7 and DR9 are the common halotypes in Shandong population and similar to those in the other areas of China. 40% patients could search out at least 1 UCB unit with 1 mismatched HLA locus in Shandong Cord Blood Bank.
Antigens, CD34
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immunology
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Blood Banks
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Blood Preservation
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Cell Count
;
China
;
Data Interpretation, Statistical
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Fetal Blood
;
cytology
;
immunology
;
metabolism
;
Gene Frequency
;
HLA-A Antigens
;
genetics
;
HLA-B Antigens
;
genetics
;
HLA-DR Antigens
;
genetics
;
Humans
;
Leukocyte Count
;
Leukocytes
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cytology
;
immunology
;
Time Factors
8.Possible association of HLA-DRB1 gene with the autoantibody against myocardial mitochondria ADP/ATP carrier in dilated cardiomyopathy.
Qiufen WANG ; Yuhua LIAO ; Feili GONG ; Huanyuan MAO ; Jinzhi ZHANG
Journal of Huazhong University of Science and Technology (Medical Sciences) 2002;22(3):231-245
To probe the genetic background and immunopathogenesis of dilated cardiomyopathy (DCM) 77 patients with DCM, HLA-DRB1 gene polymorphism were analyzed by using the polymerase chain reaction/sequence specific primer (PCR/SSP) technique and autoantibody against myocardial mitochondria ADP/ATP carrier were examined by using the Immunoblot analysis. The frequency of HLA-DRB1*0901 allele was significantly higher in DCM patients in which autoantibody against ADP/ATP carrier of myocardial mitochondria is positive in contrast with those in which the autoantibody is negative (25.46% vs 3.45%, P < 0.05), the relative risk (RR) being 9.56. The other frequencies of HLA-DRB1 alleles have no significant difference in the antibody positive group and negative group. It is possible that a subset of DCM patients may exist in which autoimmunity is associated with genetic factors.
Adult
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Autoantibodies
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immunology
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Cardiomyopathy, Dilated
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genetics
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immunology
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Female
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HLA-DR Antigens
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genetics
;
immunology
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HLA-DRB1 Chains
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Humans
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Male
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Middle Aged
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Mitochondria, Heart
;
immunology
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Mitochondrial ADP, ATP Translocases
;
immunology
9.Tourette disorder and HLA typing.
Sung Kil MIN ; Helen LEE ; Ki Il PARK ; Min Sook PARK ; Kee NAMKOONG
Yonsei Medical Journal 1991;32(4):315-318
HLA A, B, C and DR were typed in 73 Korean patients with Tourette disorder meeting the diagnostic criteria of DSM III-R and compared with 291 normal subjects. Relatively higher frequencies were found in HLA A11 and A26(10) with lower incidences in HLA A24(9) and B13. A family history of tic disorders was associated with a lower frequency of HLA A24(9).
Adolescent
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Adult
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Child
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Child, Preschool
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Female
;
HLA Antigens/*analysis
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HLA-DR Antigens/*analysis
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Human
;
Male
;
Tourette Syndrome/*genetics/immunology
10.Immunogenetic analysis of human leukocyte antigen DRB1, DQB1 locus among Han ethnic children with Helicobacter pylori infection in Kunming.
Ge-sheng WEN ; Yong-kun HUANG ; Ping HAO ; Hai-lin LI ; Qin QI ; Li-fang ZHOU
Chinese Journal of Epidemiology 2005;26(4):286-289
OBJECTIVETo explore the immunogenetic features of human leukocyte antigen DRB1, DQB1 locus and children with Helicobacter pylori (H. pylori) infection in Han ethnic population in Kunming and its association with digestive diseases and H. pylori to better understand the immunogenetic features of the H. pylori infection.
METHODSPolymerase chain reaction-sequence specific primer (PCR-SSP) method was used to study the HLA-DRB1, DQB1 allelic frequency distribution on 35 children with H. pylori infection and 37 healthy controls in Han ethnic population in Kunming.
RESULTSAllelic frequencies of HLA-DRB1 * 0901, DQB1 * 03032 in the H. pylori infection group were lower than those of the healthy control group (7.14% vs. 31.08%, chi(2) = 13.16, Pc < 0.012; 5.71% vs. 25.68%, chi(2) = 10.68, Pc = 0.007) but the rest alleles' frequencies did not show significant differences.
CONCLUSIONThese result suggested that HLA-DRB1 * 0901, DQB1 * 03032 might protect the H. pylori infection in Han ethnic population in Kunming.
Adolescent ; Alleles ; Child ; China ; epidemiology ; ethnology ; Female ; HLA-DQ Antigens ; genetics ; immunology ; HLA-DQ beta-Chains ; HLA-DR Antigens ; genetics ; immunology ; HLA-DRB1 Chains ; Helicobacter Infections ; epidemiology ; genetics ; immunology ; Helicobacter pylori ; Humans ; Male ; Polymerase Chain Reaction