1.Study on the construction of standard D12S391 allelic ladder and its genetic polymorphism in six populations.
Lin ZHANG ; Junping XIN ; Guodi CHEN ; Miao LIAO ; Ronghua LI
Chinese Journal of Medical Genetics 2002;19(1):17-21
OBJECTIVETo resolve the problem of the accuracy and standardization of short tandem repeat-polymerase chain reaction (STR-PCR) typing in forensic practice, the authors have designed a new method of producing standard D12S391 allelic ladder.
METHODSNine different PCR amplified D12S391 allelic fragments were isolated from the gel, eluted into the distilled water and re-amplified by PCR. The purified allelic fragments were then blunt-end subcloned individually into the pUC plasmid vectors and transfected into competent E.coli DH5 alpha(TM) cells. The sequencing results confirmed that the size and the structure of the inserts were correct. The recombinant plasmids DNA with 9 inserts were then used as templates for PCR re-amplification to generate D12S391 standard ladder.
RESULTSWith the ladder, the authors studied the genetic polymorphisms of D12S391 locus in six populations (German, Japanese and Chinese south-western Han, northern Han, Weiwu'er and Hui populations), and the respective primary data in the six populations were obtained. D12S391 locus showed high polymorphism in all six populations, and its exclusion power and discrimination power are 0.609-0.786 and 0.940-0.952 respectively.
CONCLUSIONThe results demonstrate that the standard ladder generated via this method is excellent, and D12S391 locus is robust for genetic research and forensic application.
Alleles ; Asian Continental Ancestry Group ; genetics ; China ; European Continental Ancestry Group ; genetics ; Forensic Medicine ; Genetics, Population ; Germany ; Humans ; Japan ; Polymerase Chain Reaction ; Polymorphism, Genetic ; Tandem Repeat Sequences ; genetics
2.Perioperative nursing care in patients with upper limb lymphedema after breast cancer surgery with super micro venous lymphatic anastomosis: 8 cases study
Meihua SONG ; Yena ZHOU ; Xiaoxiao TONG ; Guodi ZHANG
Chinese Journal of Modern Nursing 2017;23(28):3594-3596
Objective To investigate the perioperative nursing in patients with upper limb lymphedema after breast cancer surgery treated with super micro venous lymphatic anastomosis.Methods Eight cases who were treated with super micro venous lymphatic anastomosis in Tongde Hospital of Zhejiang Province from May 2015 to May 2016 were recruited in this study. The mental nursing and sufficient preoperative evaluation were required before the operation. After the operation, the affected limb should be raised above the heart. Furthermore, the manual lymphatic drainage, acupoint massage, low elastic bandage treatment and functional exercise should be implemented after the operation.Results All cases successfully completed the operation, five cases recovered very well after the operation, two cases recovered well, and one case was effectively recovered.Conclusions Super micro venous lymphatic anastomosis is effective against upper limb lymphedema after breast cancer surgery. The reinforced perioperative nursing care can promote the absorption of lymphedema.
3.Genetic polymorphisms of fifteen short tandem repeat loci in Chengdu Han population.
Yingbi LI ; Jing WU ; Yiping HOU ; Ji ZHANG ; Miao LIAO ; Lin ZHANG ; Guodi CHEN
Chinese Journal of Medical Genetics 2005;22(2):169-173
OBJECTIVETo acquire the population genetic data of fifteen short tandem repeat (STR) loci in Chengdu Han population.
METHODSA total of 210 EDTA-blood specimens were collected from the unrelated individuals in Chengdu Han population. The DNA samples were extracted with Chelex method and amplified by multiplex PCR technique. The PCR products were analyzed by an automatic genetic analyzer; the relative fragment's lengths of PCR products were calculated by gene scan analysis software and afterward genotyped by genotype software.
RESULTSFifteen STR loci of the 210 samples showed a successful result of genotyping. The heterozygosities of the fifteen STR loci in Chengdu Han population were found to be 0.529-0.881; the combined exclusion probability and discrimination power for the fifteen STR loci in Chengdu Han population were determined to be 0.999998 and 7.3 x 10 (-17); respectively.
CONCLUSIONThe distinct genotype of fifteen STR loci and the sex of sample could be unveiled just through PCR and electrophoresis once, and a higher measured value could be obtained for both the combined discrimination power and the exclusion probability; the fifteen STR loci can meet the needs of the parentage testing and personal identification in forensic medicine.
Asian Continental Ancestry Group ; genetics ; China ; Gene Frequency ; Genotype ; Humans ; Microsatellite Repeats ; genetics ; Polymerase Chain Reaction ; Polymorphism, Genetic ; genetics
4.Construction and validation of a fatigue risk nomogram model in patients with chronic obstructive pulmonary disease
Yunxin RU ; Lixin LAI ; Facun LIANG ; Weihong YANG ; Quanying ZHANG ; Guodi SHEN ; Xue LI
Chinese Journal of Nursing 2024;59(13):1584-1591
Objective To develop and validate a fatigue risk nomogram model in Chronic Obstructive Pulmonary Disease(COPD)patients.Methods A prospective study design was adopted,and 430 COPD patients recruited from a tertiary A hospital in Huzhou City from January to December 2022 were conveniently selected for model construction,and 129 patients were recruited from the same hospital from January to June 2023 for external validation of the model.The general information questionnaire,Pittsburgh Sleep Quality Index,2-item Generalized Anxiety Disorder Scale,2-item Patient Health Questionnaire,modified British Medical Research Council Dyspnea Index,International Physical Activity Questionnaire,and Fatigue Severity Scale were used for questionnaire survey.The risk prediction model and nomograms model were constructed using Logistic regression analysis and R 4.3.2 software,and the area under the receiver operating characteristic(ROC)curve was used to test the prediction effect of the model.Results Univariate and binary logistic regression analysis results showed that age(OR=1.095),gender(OR=2.077),dyspnea(OR=3.309),sleep quality(OR=1.979),anemia(OR=3.289),the number of acute exacerbation(OR=2.991)were independent influencing factors for fatigue in COPD patients.The internal evaluation and external validation results of the model showed that the areas under the curve are 0.912 and 0.844 respectively,and the Hosmer-Lemeshow goodness of fit test P values were 0.806 and 0.526 respectively.The average absolute errors were 0.013 and 0.019 respectively.Conclusion The COPD fatigue risk prediction model constructed in this study has good prediction effect.The visual nomogram is intuitive,convenient and easy to operate.It can provide a tool for early screening of fatigue in COPD patients.