2.Clinical and laboratory study of myleodysplastic syndrome (MDS)/myeloproliferative neoplasm (MPN) with PDGFRβ abnormalities.
Sheng-Lan GONG ; Hui-Ying QIU ; Xian-Min SONG ; Ru SHAO ; Jian-Min WANG
Chinese Journal of Hematology 2010;31(8):540-544
OBJECTIVETo explore the clinical and laboratory characteristics of myleodysplastic syndrome (MDS)/myeloproliferative neoplasm (MPN) with PDGFRβ abnormalities.
METHODSChromosome specimens were prepared directly and/or short-time culture of bone marrow cells. Karyotyping was performed with R-binding technique. Fluorescence in situ hybridization (FISH) was performed using PDGFRβ, PDGFRα, FGFR1 break-apart probes and whole chromosome 5 and 12 painting probes, respectively. The expression of JAK2 V617F was measured with quantitative PCR.
RESULTSThe clinical and hematological findings of 27 patients were compatible with diagnosis of MDS/MPN. PDGFRβ rearrangement was detected in 4 patients with D-FISH, and 2 of which were confirmed as t(5;12) by chromosome painting. PDGFRα, FGFR1 and JAK2 V617F mutation were not detected in these 4 PDGFRβ positive MDS/MPN patients with.
CONCLUSIONSPDGFRβ gene rearrangement may be detected in some MDS/MPN patients. FISH is a convenient and reliable approach to detect PDGFRβ gene.
Humans ; In Situ Hybridization, Fluorescence ; Karyotyping ; Myeloproliferative Disorders ; genetics ; Neoplasms ; Receptor, Platelet-Derived Growth Factor beta ; genetics
4.Genetic analysis of a child with Meier-Gorlin syndrome due to a variant of ORC6 gene.
Lili WANG ; Fengyun WANG ; Xiaoyan WANG ; Linqi CHEN
Chinese Journal of Medical Genetics 2023;40(10):1292-1295
OBJECTIVE:
To analyze the genetic characteristics of a child with Meier-Gorlin syndrome (MGS) due to a homozygous variant of the ORC6 gene.
METHODS:
A child who was admitted to the Children's Hospital Affiliated to Soochow University on March 25, 2019 due to growth retardation was selected as the study subject. Clinical data of the child was collected. Whole exome sequencing was carried out for the child. Candidate variant was validated by Sanger sequencing and bioinformatic analysis.
RESULTS:
The child, a 8-year-and-3-month-old male, has featured short stature, small ears, bilateral cryptorchidism and patellar dysplasia. His parents were of first cousins. The child was found to harbor a homozygous c.712A>T (p.K238*) missense variant of the ORC6 gene, which may lead to premature termination of protein translation. Sanger sequencing confirmed that both of his parents were heterozygous carriers. Based on the guidelines from the American College of Medical Genetics and Genomics, the variant was classified as pathogenic (PVS1_Moderate+PM2_Supporting+PM3+PP3+PP4).
CONCLUSION
The homozygous c.712A>T (p.K238*) variant probably underlay the MGS in this child.
Humans
;
Infant
;
Male
;
Computational Biology
;
Congenital Microtia/genetics*
;
Dwarfism/genetics*
;
Growth Disorders/genetics*
;
Origin Recognition Complex/genetics*
5.A case of 9p partial monosomy syndrome.
Jing-hui ZHANG ; Na-na QIAO ; Wen LI ; Ji-wen WANG
Chinese Journal of Pediatrics 2013;51(9):697-698
6.BCS1Neonatal growth retardation and lactic acidosis initiated by novel mutation sites in L gene.
Ming WANG ; Dong Juan WANG ; Yi SHU ; Dan ZHU ; Chao Wen YU ; Xiao Yan HE ; Lin ZOU
Chinese Journal of Preventive Medicine 2023;57(6):912-917
This study aims to analyze the clinical characteristics and genetic variations of two cases with developmental delay and lactic acidosis in a family, and to explore the relationship between genetic variations and clinical features. A retrospective analysis was conducted on the clinical characteristics of two siblings with developmental delay and lactic acidosis who were treated at the Neonatal Department of Children's Hospital of Chongqing Medical University in May 2019 and December 2021, respectively. Whole-exome sequencing was used to detect genetic variations in the affected children. Homology modeling of the BCS1L protein was performed to analyze the structural and functional changes of the protein. The correlation between genetic variations and clinical phenotypes was analyzed. The results showed that the main clinical features of the two affected children in this family were manifestations of mitochondrial respiratory chain complex Ⅲ deficiency, including prematurity, developmental delay, respiratory failure, lactic acidosis, cholestasis, liver dysfunction, renal tubular lesions, coagulation dysfunction, anemia, hypoglycemia, hypotonia, and early death. Whole-exome sequencing revealed a novel deletion mutation c.486_488delGGA (p.E163del) and a novel missense mutation c.992C>T (p.T331I) in the BCS1L gene. Structural analysis of the homology modeling showed that the compound heterozygous mutation had a significant impact on protein function. In conclusion, the novel mutation site c.992C>T (p.T331I) in the BCS1L gene is a "likely pathogenic" mutation, and the compound heterozygous mutation is closely related to the phenotype of mitochondrial respiratory chain complex Ⅲ deficiency.
Humans
;
Acidosis, Lactic/genetics*
;
Electron Transport Complex III/genetics*
;
Retrospective Studies
;
Mutation
;
Growth Disorders
;
ATPases Associated with Diverse Cellular Activities/genetics*
7.Myeloid and lymphoid neoplasms with eosinophilia and abnormalities of PDGFRA, PDGFRB or FGFR1.
Chinese Journal of Pathology 2012;41(11):779-783
Animals
;
Eosinophilia
;
genetics
;
pathology
;
Gene Rearrangement
;
Humans
;
Lymphoma
;
genetics
;
pathology
;
Myeloproliferative Disorders
;
genetics
;
pathology
;
Receptor, Fibroblast Growth Factor, Type 1
;
genetics
;
Receptor, Platelet-Derived Growth Factor alpha
;
genetics
;
Receptor, Platelet-Derived Growth Factor beta
;
genetics
9.Helsmoortel-Van der Aa syndrome due to hotspot mutation of ADNP gene and a literature review.
Xiu ZHAO ; Zhe SU ; Zhongwei XU ; Huiping SU ; Rongfei ZHENG
Chinese Journal of Medical Genetics 2023;40(11):1382-1386
OBJECTIVE:
To summarize the clinical features and biological characteristics of Helsmoortel Van der Aa syndrome (HVDAS) due to hotspot mutations of the ADNP gene in order to facilitate early diagnosis.
METHODS:
Clinical data and result of genetic testing for a girl with HVDAS due to hotspot mutation of the ADNP gene was summarized. Related literature was also reviewed.
RESULTS:
The patient, a 2-year-old girl, had presented with growth retardation, facial dysmorphism, psychomotor and language delay and recurrent respiratory infections. Whole exome sequencing revealed that she has harbored a heterozygous c.2496_2499delTAAA (p.Asn832Lysfs*81) variant of the ADNP gene, which was not found in either of her parents.
CONCLUSION
Although the typical features of the HVDAS have included intellectual disability and autism spectrum disorders, growth retardation and premature primary tooth eruption may also be present. In addition, the phenotypic difference among individuals carrying hot spot variants of the ADNP gene was not prominent.
Humans
;
Female
;
Child, Preschool
;
Intellectual Disability/genetics*
;
Homeodomain Proteins/genetics*
;
Nerve Tissue Proteins/genetics*
;
Abnormalities, Multiple/genetics*
;
Mutation
;
Rare Diseases
;
Growth Disorders/genetics*
10.Association between single nucleotide polymorphism of insulin-like growth factor receptor gene and idiopathic short stature.
Hui HUANG ; Yu YANG ; Wei WANG ; Li YANG ; Li-Ling XIE ; Ying WANG ; Hai-Yan WEI
Chinese Journal of Contemporary Pediatrics 2011;13(12):955-958
OBJECTIVETo study the association between single nucleotide polymorphism (SNP) of insulin-like growth factor I receptor (IGF-IR) gene and idiopathic short stature (ISS).
METHODSA total of 804 children with ISS and 575 normal controls were recruited from 2008 to 2011. IGF-IR gene SNP was genotyped using the Snapshot Multiplex System.
RESULTSThe distribution frequency of genotype rs1976667 showed no significant difference between the ISS and the control groups, while that of the allele A of rs1976667 was significantly higher in the ISS group than in the control group (P<0.01).
CONCLUSIONSThe allele A at rs1976667 SNP of IGF-IR gene is a risk factor for ISS.
Adolescent ; Child ; Child, Preschool ; Female ; Growth Disorders ; genetics ; Humans ; Male ; Polymorphism, Single Nucleotide ; Receptor, IGF Type 1 ; genetics