1.Current Understanding of Mycobacterium abscessus Infection.
Go Eun CHOI ; Youngsuk JO ; Sung Jae SHIN
Journal of Bacteriology and Virology 2012;42(1):17-28
Mycobacterium abscessus belongs to a group of rapidly growing mycobacteria (RGM) that cause a broad spectrum of infections in humans. In addition, the association of M. abscessus with the cause of community- and hospital-acquired infections has been recently reported. In fact, M. abscessus is known to be the most drug-resistant mycobacterium and naturally resistant to first-line anti-tuberculous drugs, resulting in the limited therapeutic options and a high failure rate of treatment response. Three closely related species; M. abscessus (sensu stricto), M. bolletii, and M. massiliense are currently identified however, consensus on the naming of M. abscessus-related species has not been made to date. We herein discuss the advanced understanding of the virulence potentials and pathophysiological features of M. abscessus to establish novel therapeutic strategies for M. abscessus infection.
Consensus
;
Humans
;
Mycobacterium
2.Concurrent Anti-glomerular Basement Membrane Nephritis and IgA Nephropathy
Kwang Sun SUH ; Song Yi CHOI ; Go Eun BAE ; Dae Eun CHOI ; Min kyung YEO
Journal of Pathology and Translational Medicine 2019;53(6):399-402
Anti–glomerular basement membrane (GBM) nephritis is characterized by circulating anti-GBM antibodies and crescentic glomerulonephritis (GN) with deposition of IgG along the GBM. In a limited number of cases, glomerular immune complexes have been identified in anti-GBM nephritis. A 38-year-old female presented azotemia, hematuria, and proteinuria without any pulmonary symptoms. A renal biopsy showed crescentic GN with linear IgG deposition along the GBM and mesangial IgA deposition. The patient was diagnosed as concurrent anti-GBM nephritis and IgA nephropathy. Therapies with pulse methylprednisolone and cyclophosphamide administration were effective. Concurrent cases of both anti-GBM nephritis and IgA nephropathy are rare among cases of anti-GBM diseases with deposition of immune complexes. This rare case of concurrent anti-GBM nephritis and IgA nephropathy with literature review is noteworthy.
Adult
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Anti-Glomerular Basement Membrane Disease
;
Antibodies
;
Antigen-Antibody Complex
;
Azotemia
;
Basement Membrane
;
Biopsy
;
Cyclophosphamide
;
Female
;
Glomerulonephritis
;
Glomerulonephritis, IGA
;
Hematuria
;
Humans
;
Immunoglobulin A
;
Immunoglobulin G
;
Methylprednisolone
;
Nephritis
;
Proteinuria
3.Strain Typing of Mycobacterium tuberculosis Isolates from Korea by Mycobacterial Interspersed Repetitive Units-Variable Number of Tandem Repeats.
Kyung Won YUN ; Eun Ju SONG ; Go Eun CHOI ; In Kyung HWANG ; Eun Yup LEE ; Chulhun L CHANG
The Korean Journal of Laboratory Medicine 2009;29(4):314-319
BACKGROUND: Mycobacterium tuberculosis is one of the most clinically significant infectious agents. Especially during mass outbreaks, accurate identification and monitoring are required. The proportion of Beijing family members is very high among infecting strains, and spoligotyping is not suitable for strain typing. Therefore, we studied the homogeneity of isolates using the mycobacterial interspersed repetitive units-variable number of tandem repeats (MIRU-VNTR) method and identified its utility for carrying out molecular epidemiologic analysis. METHODS: Eighty-one clinical M. tuberculosis isolates that had previously been analyzed by spoligotyping were used in this study. We used the 12 standard MIRU loci and further four exact tandem repeat (ETR) loci (ETR-A, -B, -C, and -F). Four strains each of randomly selected Beijing and Beijing-like families were subjected to IS6110- restriction fragment length polymorphism analysis. RESULTS: All 81 samples showed amplification products of all VNTR loci, and all of them showed differences in at least one locus. The calculation of the Hunter-Gaston diversity index (HGDI) for MIRU-VNTR gave the value of 0.965. Discriminatory index in the six loci (MIRU-10, -16, -26, -31, -39, and ETR-F) were found to be highly discriminated (HGDI >0.6). Beijing and Beijing-like family isolates were discriminated into different MIRU-VNTR types. CONCLUSIONS: MIRU-VNTR analysis by using well-selected loci can be useful in discriminating the clinical M. tuberculosis isolates in areas where the Beijing family is predominant.
Bacterial Typing Techniques/*methods
;
DNA, Bacterial/analysis
;
Genotype
;
Humans
;
*Minisatellite Repeats
;
Mycobacterium tuberculosis/*classification/genetics/isolation & purification
;
Polymerase Chain Reaction
;
Republic of Korea
;
Tuberculosis/diagnosis/*microbiology
4.Acute Necrotizing Esophagitis: An Autopsy Case Report and Literature Review.
Minsung CHOI ; Go Un JUNG ; Yun Teak SHIM ; Hyung Nam KOO ; Byung Ha CHOI ; Nak Eun CHUNG ; Young Shik CHOI ; Yi Suk KIM
Korean Journal of Legal Medicine 2014;38(1):30-33
Acute necrotizing esophagitis (AEN), also called "black esophagus," is a rare disorder with an unknown pathogenesis. Endoscopic findings generally show black pigmentation throughout the esophagus. This case also offered rare views of the gross anatomy of this disorder. Histological examination revealed that the mucosal and submucosal layers of the esophagus were involved in the severe necrotizing inflammation. The chief manifestation of this disease is hematemesis from hemorrhage of the upper gastrointestinal tract with a typically multifactorial etiology. AEN is also characterized by a clear boundary at the gastroesophageal junction where the necrosis stops. In this study, we report an autopsy case of a 61-year-old man with necrotizing inflammation throughout the esophagus and esophageal necrosis from the laryngopharynx to the gastroesophageal junction. The patient was a disabled person with a history of alcohol abuse who was also diagnosed with mild coronary arteriosclerosis and fatty liver on the basis of the underlying diseases. In this case, the main etiology for poor perfusion from the distal esophageal area was likely underlying illness, history of alcoholism, and malnutrition.
Alcoholism
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Autopsy*
;
Coronary Artery Disease
;
Disabled Persons
;
Esophagitis*
;
Esophagogastric Junction
;
Esophagus
;
Fatty Liver
;
Hematemesis
;
Hemorrhage
;
Humans
;
Hypopharynx
;
Inflammation
;
Malnutrition
;
Middle Aged
;
Necrosis
;
Perfusion
;
Pigmentation
;
Upper Gastrointestinal Tract
5.Pharmacotherapeutic Problems and Pharmacist Interventions in a Medical Intensive Care Unit.
Tae Yun PARK ; Sang Min LEE ; Sung Eun KIM ; Ka Eun YOO ; Go Wun CHOI ; Yun Hee JO ; Yoonsook CHO ; Hyeon Joo HAHN ; Jinwoo LEE ; A Jeong KIM
Korean Journal of Critical Care Medicine 2015;30(2):82-88
BACKGROUND: Interest in pharmacist participation in the multidisciplinary intensive care team is increasing. However, studies examining pharmacist interventions in the medical intensive care unit (MICU) are limited in Korea. The aim of this study was to describe the current status of pharmacist interventions and to identify common pharmacologic problems requiring pharmacist intervention in the MICU. METHODS: Between September 2013 and August 2014, a retrospective, observational study was conducted in the 22-bed MICU at a university hospital. Data were obtained from two trained pharmacists who participated in MICU rounds three times a week. In addition to patient characteristics, data on the cause, type, related drug, and acceptance rate of interventions were collected. RESULTS: In 340 patients, a total of 1211 pharmacologic interventions were performed. The majority of pharmacologic interventions were suggested by pharmacists at multidisciplinary rounds in the MICU. The most common pharmacologic interventions were adjustment of dosage and administration (n = 328, 26.0%), followed by parenteral/enteral nutritional support (n = 228, 18.1%), the provision of drug information (n = 228, 18.1%), and advice regarding pharmacokinetics (n = 118, 9.3%). Antimicrobial agents (n = 516, 42.6%) were the most frequent type of drug associated with pharmacist interventions. The acceptance rate of interventions was 84.1% with most accepted by physicians within 24 hours (n = 602, 92.8%). CONCLUSIONS: Medication and nutritional problems are frequently encountered pharmacotherapeutic problems in the MICU. Pharmacist interventions play an important role in the management of these problems.
Anti-Infective Agents
;
Humans
;
Critical Care
;
Intensive Care Units*
;
Korea
;
Nutritional Support
;
Observational Study
;
Pharmacists*
;
Pharmacokinetics
;
Retrospective Studies
6.Outcome of High Dose Ampicillin-Sulbactam and Colistin Combination Therapy for Treating Ventilator-Associated Pneumonia Caused by Carbapenem-Resistant Acinetobacter baumannii: a Pilot Study
Seong Hee JEONG ; Young A KIM ; Go-eun CHOI ; Su Eun PARK
Pediatric Infection & Vaccine 2020;27(1):45-52
Purpose:
This pilot study aimed to evaluate the efficacy of high dose ampicillin-sulbactam and colistin combination therapy for ventilator-associated pneumonia (VAP) caused by carbapenem-resistant Acinetobacter baumannii (CRAB) in the pediatric intensive care unit of Pusan National University Children's Hospital.
Methods:
We retrospectively reviewed 17 pediatric patients with VAP caused by CRAB from June 2017 to August 2018. Ten (58.8%) patients were treated with high dose ampicillin-sulbactam and colistin combination therapy (combination therapy group), whereas 7 were treated with colistin only or with various combinations with or without colistin (other antibiotics group). Clinical and bacteriological outcomes were compared between the groups.
Results:
The mean duration of fever after antibiotic use was 1.30±1.70 days in the combination therapy group and 1.71±1.49 days in the other antibiotics group. The mean duration of days for negative conversion of endotracheal aspirate bacterial culture afterantibiotic therapy was 3.40±1.71 days in the combination therapy group and 11.80±8.86 days in the other antibiotics group. The mortality rate within 30 days of antibiotic therapy was 1/10 (10%) in the combination therapy group and 3/7 (42.9%) in the other antibiotics group.
Conclusions
High dose ampicillin-sulbactam and colistin combination therapy as early antibiotic treatment in VAP caused by CRAB in children could improve clinical outcomes.
7.Molecular Strain Typing of Mycobacterium tuberculosis: a Review of Frequently Used Methods.
Phyu Win EI ; Wah Wah AUNG ; Jong Seok LEE ; Go Eun CHOI ; Chulhun L CHANG
Journal of Korean Medical Science 2016;31(11):1673-1683
Tuberculosis, caused by the bacterium Mycobacterium tuberculosis, remains one of the most serious global health problems. Molecular typing of M. tuberculosis has been used for various epidemiologic purposes as well as for clinical management. Currently, many techniques are available to type M. tuberculosis. Choosing the most appropriate technique in accordance with the existing laboratory conditions and the specific features of the geographic region is important. Insertion sequence IS6110-based restriction fragment length polymorphism (RFLP) analysis is considered the gold standard for the molecular epidemiologic investigations of tuberculosis. However, other polymerase chain reaction-based methods such as spacer oligonucleotide typing (spoligotyping), which detects 43 spacer sequence-interspersing direct repeats (DRs) in the genomic DR region; mycobacterial interspersed repetitive units–variable number tandem repeats, (MIRU-VNTR), which determines the number and size of tandem repetitive DNA sequences; repetitive-sequence-based PCR (rep-PCR), which provides high-throughput genotypic fingerprinting of multiple Mycobacterium species; and the recently developed genome-based whole genome sequencing methods demonstrate similar discriminatory power and greater convenience. This review focuses on techniques frequently used for the molecular typing of M. tuberculosis and discusses their general aspects and applications.
Base Sequence
;
Dermatoglyphics
;
Genome
;
Global Health
;
Methods*
;
Molecular Typing
;
Mycobacterium tuberculosis*
;
Mycobacterium*
;
Polymerase Chain Reaction
;
Polymorphism, Restriction Fragment Length
;
Repetitive Sequences, Nucleic Acid
;
Tandem Repeat Sequences
;
Tuberculosis
8.An unexpected increase of entropy in a sleepwalking disorder patient during propofol and remifentanil anesthesia: a case report.
Yoon Ji CHOI ; Koo KWON ; Go Eun BAE ; Seung Zhoo YOON ; Hye Won LEE ; Hae Ja LIM
Korean Journal of Anesthesiology 2014;67(4):270-274
We report a case of increased values of entropy parameters Response Entropy (RE) and State Entropy (SE) during intravenous general anesthesia in a sleepwalking patient. An ASA class II, 64-year-old woman with stress incontinence underwent mid-urethral sling surgery. Prior to surgery, the patient had been administered paroxetine, valproic acid and clonazepam for the treatment of sleepwalking disorder. After 10 min of target-controlled infusion of propofol and remifentanil, entropy values increased up to 94 (RE) and 88 (SE) for 10 min. The target effect-site concentrations of anesthetics increased from 4 to 7 microg/ml propofol and 4 ng/ml remifentanil, at which point values fell back to adequate anesthesia levels. Episodes of recall or of explicit memories did not occur during the anesthesia. In conclusion, sleepwalking patients with long-term use medications may need increment of anesthetic dose caused by the anesthetic drug metabolism activation or impairment or immaturity of inhibitory circuits in brain.
Anesthesia*
;
Anesthesia, General
;
Anesthetics
;
Brain
;
Clonazepam
;
Entropy*
;
Female
;
Humans
;
Metabolism
;
Middle Aged
;
Paroxetine
;
Propofol*
;
Somnambulism*
;
Suburethral Slings
;
Valproic Acid
9.An unexpected increase of entropy in a sleepwalking disorder patient during propofol and remifentanil anesthesia: a case report.
Yoon Ji CHOI ; Koo KWON ; Go Eun BAE ; Seung Zhoo YOON ; Hye Won LEE ; Hae Ja LIM
Korean Journal of Anesthesiology 2014;67(4):270-274
We report a case of increased values of entropy parameters Response Entropy (RE) and State Entropy (SE) during intravenous general anesthesia in a sleepwalking patient. An ASA class II, 64-year-old woman with stress incontinence underwent mid-urethral sling surgery. Prior to surgery, the patient had been administered paroxetine, valproic acid and clonazepam for the treatment of sleepwalking disorder. After 10 min of target-controlled infusion of propofol and remifentanil, entropy values increased up to 94 (RE) and 88 (SE) for 10 min. The target effect-site concentrations of anesthetics increased from 4 to 7 microg/ml propofol and 4 ng/ml remifentanil, at which point values fell back to adequate anesthesia levels. Episodes of recall or of explicit memories did not occur during the anesthesia. In conclusion, sleepwalking patients with long-term use medications may need increment of anesthetic dose caused by the anesthetic drug metabolism activation or impairment or immaturity of inhibitory circuits in brain.
Anesthesia*
;
Anesthesia, General
;
Anesthetics
;
Brain
;
Clonazepam
;
Entropy*
;
Female
;
Humans
;
Metabolism
;
Middle Aged
;
Paroxetine
;
Propofol*
;
Somnambulism*
;
Suburethral Slings
;
Valproic Acid
10.Mutational Analysis of Extranodal NK/T-Cell Lymphoma Using Targeted Sequencing with a Comprehensive Cancer Panel.
Seungkyu CHOI ; Jai Hyang GO ; Eun Kyung KIM ; Hojung LEE ; Won Mi LEE ; Chun Sung CHO ; Kyudong HAN
Genomics & Informatics 2016;14(3):78-84
Extranodal natural killer (NK)/T-cell lymphoma, nasal type (NKTCL), is a malignant disorder of cytotoxic lymphocytes of NK or T cells. It is an aggressive neoplasm with a very poor prognosis. Although extranodal NKTCL reportedly has a strong association with Epstein-Barr virus, the molecular pathogenesis of NKTCL has been unexplored. The recent technological advancements in next-generation sequencing (NGS) have made DNA sequencing cost- and time-effective, with more reliable results. Using the Ion Proton Comprehensive Cancer Panel, we sequenced 409 cancer-related genes to identify somatic mutations in five NKTCL tissue samples. The sequencing analysis detected 25 mutations in 21 genes. Among them, KMT2D, a histone modification-related gene, was the most frequently mutated gene (four of the five cases). This result was consistent with recent NGS studies that have suggested KMT2D as a novel driver gene in NKTCL. Mutations were also found in ARID1A, a chromatin remodeling gene, and TP53, which also recurred in recent NGS studies. We also found mutations in 18 novel candidate genes, with molecular functions that were potentially implicated in cancer development. We suggest that these genes may result in multiple oncogenic events and may be used as potential bio-markers of NKTCL in the future.
Chromatin Assembly and Disassembly
;
Herpesvirus 4, Human
;
High-Throughput Nucleotide Sequencing
;
Histones
;
Lymphocytes
;
Lymphoma*
;
Prognosis
;
Protons
;
Sequence Analysis, DNA
;
T-Lymphocytes