2.Antituberculosis Drug Resistance in Korea , 1998-1999.
Gill Han BAI ; Young Kil PARK ; Hyang Kyu LEE ; Sang Jae KIM
Journal of the Korean Society for Microbiology 2000;35(5):368-368
No Abstract Available.
Drug Resistance*
;
Korea*
3.Rapid Drug Susceptibility Testing for Isoniazid and Rifampicin by Reverse Hybridization Assay.
Young Kil PARK ; Hee Kyoung YU ; Sung Weon RYU ; Gill Han BAI
Tuberculosis and Respiratory Diseases 2003;55(5):440-448
BACKGROUND: Development of rapid drug susceptibility testing provides the opportunity for rapid identification of individuals with drug resistant tubercle bacilli, allowing selection of appropriate therapeutic regimens. METHODS: A total of 502 drug resistant isolates were subjected to reverse blot hybridization assay to detect mutations within genes (rpoB, katG, inhA, and ahpC) associated with rifampicin (RMP) and isoniazid (INH) resistance. RESULTS: Among the 264 RMP resistant strains (RMPR) tested, the most prevalent mutation was the Ser531Leu seen in 121 strains (46%). The second common mutation occurred in 84 strains (32%) at codon 526. And 27 strains (10%) showed the mutation at codon 516. Among all 469 INH resistant strains (INHR), the katG mutation was responsible for INH. The inhA mutation was present in 88 strains (19%). In 11 isolates (2%), coexisting of the katG and inhA mutations were identified. Reverse hybridization assay successfully detected over 80% of INHR and over 92% of RMPR among Korean isolates. CONCLUSION: Reverse hybridization was useful for rapid detection of INHR and RMPR.
Codon
;
Genotype
;
Isoniazid*
;
Korea
;
Mycobacterium tuberculosis
;
Rifampin*
4.Evaluation of a serodiagnostic method for tuberculosis by using secreted protein antigens of Mycobacterium Tuberculosis.
Gill Han BAI ; Eun Mi PARK ; Sang Jae KIM
Tuberculosis and Respiratory Diseases 2000;48(3):315-323
BACKGROUND: An immunochromatographic assay (ICT Diagnostics) which facilitates the diagnosis of tuberculosis(TB) by detecting serum antibodies mainly directed against specific 38KDa of Mycobacterium tuberculosis has come into the market. The test consists of a cardboard folding device containing nitrocellulose strip and absorbent pads. The whole procedure is completed within 15 min and does not require any additional equipment. The test has been reported to be sensitive and specific in diagnosing active TB. Thus the test had been evaluated with sera from TB patients and TB-free subjects. METHOD: Sera from patients with active pulmonary tuberculosis(40 sputum positives for Mycobacterium tuberculosis, 79 sputum negatives, and 3 extrapulmonary tuberculosis) were obtained from the Double-Cross Chest Clinic of the Korean National Tuberculosis Association (KNTA) in Seoul. The control group consisted of TB-free 68 subjects(21 children under 7 years old and 47 healthy staff members of KNTA). RESULTS: Nine out of 68(13.2%) TB-free controls had positive antibody response. Total 106 of 122(86.9%) radiologically active patients had positive antibodies while 16 (13.1%) showed negative reaction. Antibody was detected in 38 of 40(95.0%) sputum positive patients and 68 of 82(82.9%) sputum negative patients who were under the antituberculosis chemotherapy. The sensitivity and specificity were all 87% and the positive predictive value was 92.2% while the negative predictive value was 78.7%, when the prevalence of TB in the sample was 64.2%. It is clear from our results that the detection of antibodies which mainly react with the 38KDa antigen of M. tuberculosis should not be suitable as first-line method of diagnosis, but considered only as an adjunctive test to standard techniques of tuberculosis diagnosis, when considering its high false positivity.
Absorbent Pads
;
Antibodies
;
Antibody Formation
;
Child
;
Collodion
;
Diagnosis
;
Drug Therapy
;
Humans
;
Immunochromatography
;
Mycobacterium tuberculosis*
;
Mycobacterium*
;
Prevalence
;
Seoul
;
Serologic Tests
;
Sputum
;
Thorax
;
Tuberculosis*
5.The Proportion of Rifabutin-susceptible Strains among Rifampicin- resistant Isolates and Its Specific rpoB Mutations.
Woo Jin LEW ; Young Kil PARK ; Hee Jin KIM ; Chulhun CHANG ; Gill Han BAI ; Sung Kyu KIM
Tuberculosis and Respiratory Diseases 2005;59(3):257-265
BACKGROUND: Rifabutin (ansamycin) is a spiro-piperidyl rifamycin, which is highly active against Mycobacterium tuberculosis. It has been found that some clinical isolates of tubercle bacilli that are resistant to rifampicin are susceptible to rifabutin, with some patients with multi-drug resistant pulmonary tuberculosis having shown favorable clinical and bacteriological responses to the rifabutin. This study was conducted to find the proportion of rifabutin- susceptible strains among rifampicin-resistant isolates from Korean MDR-TB patients, and investigate the presence of specific rpoB mutations, which may confer resistance to rifampicin, but not to rifabutin. METHODS: 201 rifampicin-resistant and 50 pan-susceptible M. tuberculosis isolates were randomly selected for this study. The isolates were retested at rifampicin and rifabutin concentrations of 0, 20, 40 and 80 microgram/ml, respectively. The isolates that grew at and/or over a rifabutin concentration of 20 microgram/ml were judged rifabutin-resistant. The rpoB gene was extracted from the isolates, and then amplified for direct sequencing to investigate specific rpoB mutations that conferred rifabutin- susceptibility but rifampicin-resistance. RESULTS: Out of the 201 rifampicin-resistant M. tuberculosis, 41 strains (20.4%) were susceptible to rifabutin using the absolute concentration method on Lowenstein-Jensen media. The rpoB mutation types that showed susceptibility to rifabutin were Leu511Pro, Ser512Arg, Gln513Glu, Asp516Ala, Asp516Gly, Asp516Val, Asp516Tyr, Ser522Leu, His526Asn, His526Leu, His526Cys, Arg529Pro and Leu533Pro. A reverse hybridization technique was able to detect 92.5% of the rifabutin-susceptible isolates, with a specificity of 96.1% among 195 M. tuberculosis isolates with the rpoB mutation. CONCLUSIONS: Around 20% of the rifampicin-resistant isolates in Korea showed susceptibility to rifabutin, which was associated with some specific mutations of rpoB. Rifabutin could be used for the treatment of MDR-TB patients, especially when drug susceptibility testing reveals susceptibility to rifabutin.
Humans
;
Korea
;
Mycobacterium tuberculosis
;
Rifabutin
;
Rifampin
;
Tuberculosis
;
Tuberculosis, Pulmonary
6.Protective Efficacy of Recombinant Proteins Adenylate Kinase, Nucleoside Diphosphate Kinase, and Heat-Shock Protein 70 against Mycobacterium tuberculosis Infection in Mice.
Seung Heon LEE ; Eun Gae LEE ; Su Yeon KIM ; Sang Nae CHO ; Young Kil PARK ; Gill Han BAI
Tuberculosis and Respiratory Diseases 2005;58(2):142-151
BACKGROUND: Priming and boosting vaccination strategy has been widely explored for new vaccine development against tuberculosis. As an effort to identify other vaccine candidates, this study was initiated to evaluate protective efficacy of adenylate kinase (AK), nucleoside diphosphate kinase (NdK), and heat shock protein 70 (Hsp70) of Mycobacterium tuberculosis. METHOD: M. tuberculosis genes encoding AK, NdK, and Hsp70 proteins were amplified by PCR and cloned into E. coli expression vector, pQE30. Recombinant AK, NdK, and Hsp70 was purified through Ni-NTA resin. To evaluate immune responses, we performed enzyme-linked immunosorbent assay (ELISA) for IgG isotype and IFN-gamma after mice were immunized subcutaneously with recombinant proteins delivered in dimethyl dioctadecylammonium bromide (DDA). Immunized- and control groups were challenged by aerosol with M. tuberculosis. The spleens and lungs of mice were removed aseptically and cultured for CFU of M. tuberculosis. RESULT: Vaccination with recombinant proteins AK, NdK, and Hsp70 delivered in DDA elicited significant level of antibody and IFN-gamma responses to corresponding antigens but no protective immunity comparable to that achieved with Mycobacterium bovis BCG. CONCLUSION: Recombinant proteins AK, NdK, and Hsp70 do not effectively control growth of M. tuberculosis in mice when immunized with DDA as an adjuvant.
Adenylate Kinase*
;
Animals
;
Clone Cells
;
Enzyme-Linked Immunosorbent Assay
;
Heat-Shock Proteins*
;
HSP70 Heat-Shock Proteins*
;
Immunoglobulin G
;
Lung
;
Mice*
;
Mycobacterium bovis
;
Mycobacterium tuberculosis*
;
Mycobacterium*
;
Nucleoside-Diphosphate Kinase*
;
Polymerase Chain Reaction
;
Recombinant Proteins*
;
Spleen
;
Tuberculosis
;
Vaccination
7.Investigation of the Growth Rate Change in Recombinant BCG which was cloned Mycobacterium tuberculosis Adenylate Kinase Mutation Gene or Human Muscle-type Adenylate Kinase Synthetic Gene.
Seung Heon LEE ; Hyo Joon KIM ; Young Kil PARK ; Gill Han BAI
Tuberculosis and Respiratory Diseases 2006;60(2):187-193
BACKGROUND: Normal cell proliferation and viability is strongly depends on the availability of metabolic energy and the maintenance of the appropriate adenylate-nucleotide pools. Hypothetically, changes in adenylate kinase (AK) expression could therefore be associated with adaptation to altered growth characteristics or inversely altered growth characteristics of proliferating cells could drive the changes in the metabolic profile. This study investigated whether the expression of either AK1 or a Mycobacterium tuberculosis adenylate kinase mutant which has the same catalytic activity of AK1 could affect the growth rate of slow-growing BCG. METHOD: Recombinant BCGs, which were cloned the human muscle-type adenylate kinase synthetic gene (AK1) and adenylate kinase mutation gene (AKmtDM) of Mycobacterium tuberculosis into the Mycobacterium/E.coli expression vectors, were constructed. Recombinant BCGs and wild-type BCG were cultured in 7H9 media and the optical density at 600nm was measured at intervals of 2-3 days. RESULT: There wasn't the growth rate change induced by AK1 or AKmtDM expression in recombinant BCGs. CONCLUSION: The expression of AK1 or Mycobacterium tuberculosis adenylate kinase mutant in BCG does not affect the growth rate of BCG.
Adenylate Kinase*
;
Cell Proliferation
;
Clone Cells*
;
Genes, Synthetic*
;
Humans*
;
Metabolome
;
Mycobacterium bovis*
;
Mycobacterium tuberculosis*
;
Mycobacterium*
8.The Relationship between Isoniazid Resistance and 463 CodonMutation of katG Gne in Mycobacterium Tuberculosis.
Young Kil PARK ; Myung Sup SHIM ; Sang Hyun CHO ; Gill Han BAI ; Sang Jae KIM
Tuberculosis and Respiratory Diseases 1996;43(1):8-13
BACKGROUND: The 463 codon mutation of katG gene has been reported as an useful marker for the detection of isoniazid(INH) resistant strains of M. tuberculosis. This study aimed to elucidate relationship between 463 mutation in katG gene and INH resistance in M. tuberculosis. METHOD: DNA was extracted from 28 INH susceptible strains(MIC > or = 0.2microg/ml on the Lowenstein Jensen media) and used for amplification of 189bp fragment containing 463 codon by PCR. Amplified fragments were digested by restriction enzyme Msp I, analyzed by single strand conformation polymorphism(SSCP) in the MDE gel and sequenced to prove mutation. RESULT: Only 7(25%) out of 28 were digestible by restriction enzyme Msp I. The SSCP pattern of 21 strains were distinctly different from that of M. tuberculosis H37Rv. Msp I undigestible PCR fragment was substituted at 463 codon from Arg(CGG) to Leu(CTG). CONCLUSION: This finding clearly indicate no relationship between 463 codon mutation of the katG gene and INH resistance.
Codon
;
DNA
;
Isoniazid*
;
Mycobacterium tuberculosis*
;
Mycobacterium*
;
Polymerase Chain Reaction
;
Polymorphism, Single-Stranded Conformational
;
Tuberculosis
9.Nontuberculous Mycobacterial Pulmonary Infection in Immunocompetent Patients.
Hyo Won LEE ; Mi Na KIM ; Tae Sun SHIM ; Gill Han BAI ; Chik Hyun PAI
Tuberculosis and Respiratory Diseases 2002;53(2):173-182
BACKGROUND: Nontuberculous mycobacteria (NTM) have usually been considered to be contaminants or colonizers when isolated from respiratory specimens in Korea, where there is a high prevalence of tuberculosis and a low rate of HIV infections. Therefore, there has been few studies on the clinical significance of NTM in a pulmonary infection. In this study, the prevalence of pulmonary NTM and the clinical significance of NTM species in immunocompetent patients were investigated. METHOD: Thirty-five NTM isolates, for which species identification was requested by the treating physicians during 1999 at the Asan Medical Center, were retrospectively analyzed. They were identified to the species level by mycolic acid analysis using high-performance liquid chromatography. The medical records of the patients with the NTM isolates were reviewed to identify those patients who met the American Thoracic Society (ATS)'s criteria for mycobacterial pulmonary infection. Their antimicrobial susceptibility data were compared with the clinical outcomes. RESULTS: The NTM were identified as M. intracellulare (6 isolates), M. avium (5), M. abscessus (5), M. gordonae (5), M. terrae complex (4), M. szulgai (2), M. kansasii (2), M. fortuitum (2), M. peregrinum (1), M. mucogenicum (1), M. celatum (1), and M. chelonae (1). All 35 patients showed clinical symptoms and signs of chronic lung disease, but none had a HIV infections; 16 (45.7%) patients were found to be compatible with a NTM pulmonary infection according to the ATS criteria, 5 and 4 cases were affected with M. intracellulare and M. abscessus, respectively; 8 patients had a history of pulmonary tuberculosis. 13 patients received antimycobacterial therapy for an average of 21 months and 9 patients were treated with second-line drugs. Only 4 patients had improved radiologically. CONCLUSION: A NTM should be considered a potential pathogen of pulmonary infections in immunocompetent patients with chronic pulmonary diseases. Most NTM infections were left untreated for a prolonged period and showed a poor outcome as a result. M. intracellulare and M. abscessus were the two most frequent causes of NTM pulmonary infections in this study. Species identification and antimycobacterial susceptibility tests based on the species are needed for the optimum management of a NTM pulmonary infection in patients.
10.Identification of Mycobacterium avium complex ( MAC ) clinical Strains to a Species Level by Sequencing and PCR - SSCP Analysis of rpoB DNA.
Bum Joon KIM ; Seung Hyun LEE ; Keun Hwa LEE ; Chung Kyu PARK ; Myung Sik CHOI ; Ik Sang KIM ; Sung Bai CHOI ; Eung Su HWANG ; Chang Yung CHA ; Sang Jae KIM ; Gill Han BAI ; Yoon Hoh KOOK
Journal of the Korean Society for Microbiology 1999;34(5):491-500
A recent study showed that comparative sequence analysis of rpoB DNAs could reveal natural relationships in genus Mycobacterium [J Clin Microbiol. 37 (6). 1999]. rpoB DNAs showed interspecies variation and intraspecies conservation, Based on these data, we developed polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) protocols which enable species differentiation in genus Mycabacterium. When this assay was applied to 24 clinical isolates identified as M. avium complex (MAC) by biochemical test, these were successfully differentiated into M. avium and M. intracellulare. These results were concordant with those obtained by 16s rDNA analysis. It is the first report that PCR-SSCP analysis of rpoB DNA could be used for species differentiation of MAC strains.
DNA*
;
DNA, Ribosomal
;
Mycobacterium avium Complex*
;
Mycobacterium avium*
;
Mycobacterium*
;
Polymerase Chain Reaction*
;
Polymorphism, Single-Stranded Conformational*
;
Sequence Analysis