1.Gradient Optimized Gradient-Echo Gradient Moment Nulling Sequences for Flow Compensation of Brain mages.
Geon Ho JAHNG ; Stephen PICKUP
Journal of the Korean Society of Magnetic Resonance in Medicine 2000;4(1):20-26
Gradient moment nulling techniques require the introduction of an additional gradient on each axis for each order of motion correction to be applied. The additional gradients introduce new constraints on the sequence design and increase the demands on the gradient system. The purpose of this paper is to demonstrate techniques for optimization of gradient echo gradient moment nulling sequences within the constraints of the gradient hardware. Flow compensated pulse sequences were designed and implemented on a clinical magnetic resonance imaging system. The design of the gradient moment nulling sequences requires the solution of a linear system of equations. A Mathematica package was developed that interactively solves the gradient moment nulling problem. The package allows the physicist to specify the desired order of motion compensation and the duration of the gradients in the sequence with different gradient envelopes. The gradient echo sequences with first, second, and third order motion compensation were implemented with minimum echo time. The sequences were optimized to take full advantage of the capabilities of the gradient hardware. The sequences were used to generate images of phantoms and human brains. The optimized sequences were found to have better motion compensation than comparable standard sequences.
Axis, Cervical Vertebra
;
Brain*
;
Compensation and Redress*
;
Humans
;
Magnetic Resonance Imaging
2.Practical Considerations of Arterial Spin Labeling MRI for Measuring the Multi-slice Perfusion in the Human Brain.
Korean Journal of Medical Physics 2007;18(1):35-41
In this work practical considerations of a pulsed arterial spin labeling MRI are presented to reliable multi-slice perfusion measurements in the human brain. Three parameters were considered in this study. First, in order to improve slice profile and inversion efficiency of a labeling pulse a high power inversion pulse of adiabatic hyperbolic secant was designed. A 900o rotation of the flip angle was provided to make a good slice profile and excellent inversion efficiency. Second, to minimize contributions of a residual magnetization between interleaved scans of control and labeling we tested three different conditions which were applied 1) only saturation pulses, 2) only spoiler gradients, and 3) combinations of saturation pulses and spoiler gradients. Applications of both saturation pulses and spoiler gradients minimized the residual magnetization. Finally, to find a minimum gap between a tagged plane and an imaging plane we tested signal changes of the subtracted image between control and labeled images with varying the gap. The optimum gap was about 20 mm. In conclusion, in order to obtain high quality of perfusion images in human brain it is important to use optimum parameters. Before routinely using in clinical studies, we recommend to make optimizations of sequence parameters.
Brain*
;
Humans*
;
Magnetic Resonance Imaging*
;
Perfusion*
3.Investigation of Varied MR Spectra by TE and Metabolite Amount in the Localized Voxel using the MR Cone-shape Phantom.
Dong Cheol WOO ; Sang Soo KIM ; Hyang Shuk RHIM ; Geon Ho JAHNG ; Bo Young CHOE
Korean Journal of Medical Physics 2007;18(3):179-185
The purpose of this study is to investigate the spectra of a magnetic resonance spectroscopy (MRS) in accordance with the variance of TE and the volumes of metabolites in a localized voxel for the quality assurance using a designed single voxel spectroscopy QA phantom. Because a cone-shape phantom is designed as the volume of metabolite in a localized voxel is changeable, we try to analyze the peaks of each metabolite (NAA, Cr, Cho, Lac, etc.) in accordance with metabolite volume in a localized voxel as well as echo time (TE). All data were obtained using a 3T MRI/MRS machine and analyzed using jMRUI(R). The results of this study show that TE is in inverse proportion to the noise of MRS and the longer TE and the less metabolite volume in the localized voxel, the peak intensities of each metabolite decrease. In case of the lactate, its peak was observed on the all TE only if the greatest metabolite is included in the localized voxel. Then, the intensity of a metabolite is more sensitive to the metabolite volume in the localized voxel than the TE. These obtained in vitro MRS data is provide the guideline that is important for in vivo metabolite quantification. But, in the edge of cone-shape vial air bubbles were observed and spectrum could not obtained. Therefore our cone-shape MRS phantom needs to be modified in order to solve these problems.
Lactic Acid
;
Magnetic Resonance Spectroscopy
;
Noise
;
Spectrum Analysis
4.Perfusion Magnetic Resonance Imaging: A Comprehensive Update on Principles and Techniques.
Geon Ho JAHNG ; Ka Loh LI ; Leif OSTERGAARD ; Fernando CALAMANTE
Korean Journal of Radiology 2014;15(5):554-577
Perfusion is a fundamental biological function that refers to the delivery of oxygen and nutrients to tissue by means of blood flow. Perfusion MRI is sensitive to microvasculature and has been applied in a wide variety of clinical applications, including the classification of tumors, identification of stroke regions, and characterization of other diseases. Perfusion MRI techniques are classified with or without using an exogenous contrast agent. Bolus methods, with injections of a contrast agent, provide better sensitivity with higher spatial resolution, and are therefore more widely used in clinical applications. However, arterial spin-labeling methods provide a unique opportunity to measure cerebral blood flow without requiring an exogenous contrast agent and have better accuracy for quantification. Importantly, MRI-based perfusion measurements are minimally invasive overall, and do not use any radiation and radioisotopes. In this review, we describe the principles and techniques of perfusion MRI. This review summarizes comprehensive updated knowledge on the physical principles and techniques of perfusion MRI.
Arteries/chemistry
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Brain Neoplasms/radiography
;
Contrast Media/diagnostic use
;
Humans
;
Magnetic Resonance Imaging/standards/*trends
;
Spin Labels
;
Stroke/radiography
5.Multi-slice Multi-echo Pulsed-gradient Spin-echo (MePGSE) Sequence for Diffusion Tensor Imaging MRI: A Preliminary Result.
Geon Ho JAHNG ; Stephen PICKUP
Korean Journal of Medical Physics 2007;18(2):65-72
An echo planar imaging (EPI)-based spin-echo sequence is often used to obtain diffusion tensor imaging (DTI) data on most of the clinical MRI systems. However, this sequence is confounded with the susceptibility artifacts, especially on the temporal lobe in the human brain. Therefore, the objective of this study was to design a pulse sequence that relatively immunizes the susceptibility artifacts, but can map diffusion tensor components in a single-shot mode. A multi-slice multi-echo pulsed-gradient spin-echo (MePGSE) sequence with eight echoes wasdeveloped with selective refocusing pulses for all slices to map the full tensor. The first seven echoes in the train were diffusion-weighted allowing for the observation of diffusion in several different directions in a single experiment and the last echo was for crusher of the residual magnetization. All components of diffusion tensor were measured by a single shot experiment. The sequence was applied in diffusive phantoms. The preliminary experimental verification of the sequence was illustrated by measuring the apparent diffusion coefficient (ADC) for tap water and by measuring diffusion tensor components for watermelon. The ADC values in the series of the water phantom were reliable. The MePGSE sequence, therefore, may be useful in human brain studies.
Artifacts
;
Brain
;
Citrullus
;
Diffusion Tensor Imaging*
;
Diffusion*
;
Echo-Planar Imaging
;
Humans
;
Magnetic Resonance Imaging*
;
Temporal Lobe
;
Water
6.Investigation of the Correlation between Seoul Neuropsychological Screening Battery Scores and the Gray Matter Volume after Correction of Covariates of the Age, Gender, and Genotypes in Patients with AD and MCI.
Seung Yeon LEE ; Soo Young YOON ; Min Ji KIM ; Hak Young RHEE ; Chang Woo RYU ; Geon Ho JAHNG
Journal of the Korean Society of Magnetic Resonance in Medicine 2013;17(4):294-307
PURPOSE: To investigate the correlations between Seoul Neuropsychological Screening Battery (SNSB) scores and the gray matter volumes (GMV) in patients with Alzheimer's disease (AD) and mild cognitive impairment (MCI) and cognitively normal (CN) elderly subjects with correcting the genotypes. MATERIALS AND METHODS: Total 75 subjects were enrolled with 25 subjects for each group. The apolipoprotein E (APOE) epsilon genotypes, SNSB scores, and the 3D T1-weighted images were obtained from all subjects. Correlations between SNSB scores and GMV were investigated with the multiple regression method for each subject group using both voxel-based and region-of-interest-based analyses with covariates of age, gender, and the genotype. RESULTS: In the AD group, Rey Complex Figure Test (RCFT) delayed recall scores were positively correlated with GMV. In the MCI group, Seoul Verbal Learning Test (SVLT) scores were positively correlated with GMV. In the CN group, GMV negatively correlated with Boston Naming Test (K-BNT) scores and Mini-Mental State Examimation (K-MMSE) scores, but positively correlated with RCFT scores. CONCLUSION: When we used covariates of age, gender, and the genotype, we found statistically significant correlations between some SNSB scores and GMV at some brain regions. It may be necessary to further investigate a longitudinal study to understand the correlation.
Aged
;
Alzheimer Disease
;
Apolipoproteins
;
Brain
;
Genotype*
;
Humans
;
Mass Screening*
;
Methods
;
Mild Cognitive Impairment
;
Seoul*
;
Verbal Learning
7.Gaussian Filtering Effects on Brain Tissue-masked Susceptibility Weighted Images to Optimize Voxel-based Analysis.
Eo Jin HWANG ; Min Ji KIM ; Geon Ho JAHNG
Journal of the Korean Society of Magnetic Resonance in Medicine 2013;17(4):275-285
PURPOSE: The objective of this study was to investigate effects of different smoothing kernel sizes on brain tissue-masked susceptibility-weighted images (SWI) obtained from normal elderly subjects using voxel-based analyses. MATERIALS AND METHODS: Twenty healthy human volunteers (mean age+/-SD = 67.8 +/- 6.09 years, 14 females and 6 males) were studied after informed consent. A fully first-order flow-compensated three-dimensional (3D) gradient-echo sequence ran to obtain axial magnitude and phase images to generate SWI data. In addition, sagittal 3D T1-weighted images were acquired with the magnetization-prepared rapid acquisition of gradient-echo sequence for brain tissue segmentation and imaging registration. Both paramagnetically (PSWI) and diamagnetically (NSWI) phase-masked SWI data were obtained with masking out non-brain tissues. Finally, both tissue-masked PSWI and NSWI data were smoothed using different smoothing kernel sizes that were isotropic 0, 2, 4, and 8 mm Gaussian kernels. The voxel-based comparisons were performed using a paired t-test between PSWI and NSWI for each smoothing kernel size. RESULTS: The significance of comparisons increased with increasing smoothing kernel sizes. Signals from NSWI were greater than those from PSWI. The smoothing kernel size of four was optimal to use voxel-based comparisons. The bilaterally different areas were found on multiple brain regions. CONCLUSION: The paramagnetic (positive) phase mask led to reduce signals from high susceptibility areas. To minimize partial volume effects and contributions of large vessels, the voxel-based analysis on SWI with masked non-brain components should be utilized.
Aged
;
Brain*
;
Female
;
Healthy Volunteers
;
Humans
;
Informed Consent
;
Masks
8.A Unified Gradient Shape on the Slice-Selection Axis for Flow Compensation.
Geon Ho JAHNG ; Stephen PICKUP
Journal of the Korean Society of Magnetic Resonance in Medicine 2006;10(2):70-80
Spin echo gradient moment nulling pulse sequences were designed and implemented on a clinical magnetic resonance imaging system. A new technique was introduced for flow compensation that minimized echo time and effectively suppresses unwanted echoes on the slice selection gradient axis in spin echo sequences. A unified gradient shape was used in all orders of flow compensation up to the third order. A dual-purpose gradient was applied for flow compensation and to reduce unwanted artifacts. The sequences were used to generate images of phantoms and/or human brains. This technique was especially good at reducing eddy currents and artifacts related to imperfection of the refocusing pulse. The developed sequences were found to have shorter echo times and better flow compensation in through-plane flow than those of the previous models that were used by other investigators.
Artifacts
;
Axis, Cervical Vertebra*
;
Brain
;
Compensation and Redress*
;
Humans
;
Magnetic Resonance Imaging
;
Research Personnel
9.Changes of Motor Deactivation Regions in Patients with Intracranial Lesions.
Seung Hwan LEE ; Jun Seok KOH ; Chang Woo RYU ; Geon Ho JAHNG
Journal of Korean Neurosurgical Society 2013;54(6):453-460
OBJECTIVE: There is a rich literature confirming the default mode network found compatible with task-induced deactivation regions in normal subjects, but few investigations of alterations of the motor deactivation in patients with intracranial lesions. Therefore, we hypothesized that an intracranial lesion results in abnormal changes in a task-induced deactivation region compared with default mode network, and these changes are associated with specific attributes of allocated regions. METHODS: Blood oxygenation level dependent (BOLD) functional magnetic resonance imaging (fMRI) during a motor task were obtained from 27 intracranial lesion patients (mean age, 57.3 years; range 15-78 years) who had various kinds of brain tumors. The BOLD fMRI data for each patient were evaluated to obtain activation or deactivation regions. The distinctive deactivation regions from intracranial lesion patients were evaluated by comparing to the literature reports. RESULTS: There were additive deactivated regions according to intracranial lesions: fusiform gyrus in cavernous hemangioma; lateral occipital gyrus in meningioma; crus cerebri in hemangiopericytoma; globus pallidus, lateral occipital gyrus, caudate nucleus, fusiform gyrus, lingual gyrus, claustrum, substantia nigra, subthalamic nucleus in GBM; fusiform gyrus in metastatic brain tumors. CONCLUSION: There is increasing interest in human brain function using fMRI. The authors report the brain function migrations and changes that occur in patients with intracranial lesions.
Basal Ganglia
;
Brain
;
Brain Neoplasms
;
Caudate Nucleus
;
Globus Pallidus
;
Hemangioma, Cavernous
;
Hemangiopericytoma
;
Humans
;
Magnetic Resonance Imaging
;
Meningioma
;
Oxygen
;
Substantia Nigra
;
Subthalamic Nucleus
10.Simulations of Perfusion Signals of Pulsed Arterial Spin Labeling MRI.
Hyug Gi KIM ; Geon Ho JAHNG ; Chang Hyun OH
Journal of the Korean Society of Magnetic Resonance in Medicine 2011;15(3):191-199
PURPOSE: A pulsed arterial spin labeling (PASL) signal usually depends on several parameters. The objective of this study was to determine the optimal parameters using simulation for perfusion signals of PASL magnetic resonance imaging (MRI). MATERIALS AND METHODS: Perfusion signals, DeltaM/M(0b), derived from the Bloch equation were evaluated in regard to the four most important parameters in PASL MRI: the tissue-to-blood coefficient (lambda), the longitudinal relaxation time of blood (T(1b)), the arterial transit delay from the application of tag (deltat), and the magnetic field strength (B0). The simulation was conducted with Mathematica software. RESULTS: First, perfusion signals differed depending on the value of lambda in brain tissue. The maximum signal, DeltaM/M(0b) = 0.390, was obtained at an inversion time (TI) = 1.53 sec for gray matter on 3T MRI. Second, perfusion signals were reduced with increasing deltat. The maximum signal, DeltaM/M0b = 0.526, was obtained at TI = 2.1 sec for deltat = 0.5 sec. Finally, perfusion signals increased with increasing B0. The maximum signal, DeltaM = 1.15, was obtained at TI = 1.52 sec for 3T MRI. CONCLUSION: We reported that the optimized TI values were obtained to provide the highest PASL signals. It is very important that optimized TI values be used to obtain high-quality perfusion signals using PASL MRI.
Brain
;
Magnetic Fields
;
Magnetic Resonance Imaging
;
Perfusion
;
Relaxation