4.Progress of study on the transcription factor SALL4.
Jiang LIN ; Run-Bi JI ; Jun QIAN
Journal of Experimental Hematology 2011;19(3):820-823
SAL-like 4 (SALL4) locating at chromosome 20q13.13-13.2 encodes a newly identified transcription factor containing 8 zinc finger motif. Recent studies have revealed the important role of SALL4 gene in the regulation of early embryonic development, organogenesis, and proliferation and pluripotency of embryonic stem cells. The heterozygous mutations of SALL4 in different loci, causing nonsense mutation or frameshift mutation, and resulting in genesis of premature terminal codon, are correlated with autosomal dominant hereditary diseases such as Okihiro syndrome, acro-renal-ocular syndrome and IVIC syndrome. The level of SALL4 expression is increased in germ cell tumors, hepatoid gastric carcinoma, acute myeloid leukemia, B-precursor cell leukemia/lymphoma and myelodysplastic syndrome. This review focuses on the structure and function of SALL4 gene as well as its relevance to related diseases.
Genetic Diseases, Inborn
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genetics
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Humans
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Mutation
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Transcription Factors
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genetics
5.Disease gene identification: opportunities and challenges.
Acta Academiae Medicinae Sinicae 2005;27(3):263-264
The recent achievements of the Human Genome Project make it increasingly feasible to determine the genetic basis of human diseases, especially complex traits. Genomics will provide powerful means to discover hereditary elements that interact with environmental factors leading to diseases. However, the expected transformation toward genomics-based medicine will occur over decades, which requires the joint efforts of many scientists and physicians. Such transformation provides both opportunities and challenges to everyone involved in this field.
Genetic Diseases, Inborn
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genetics
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Genetic Predisposition to Disease
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genetics
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Genetic Testing
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Human Genome Project
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Humans
6.Exome sequencing: an efficient strategy for identifying the causative genes of monogenic disorders.
Nuli REBIYA ; Mohemaiti PATAMU
Chinese Journal of Medical Genetics 2011;28(5):525-527
The development of new generation sequencing technologies has brought new opportunities for the study of diseases. Exome sequencing has shown to be an effective, rapid, high performance technique that has already been used in research of inherited diseases such as monogenic disorders. It has already been approved by scientists in the field of monogenic disorder study, and will become widely used. This approach will accelerate discovery of the causative genes of Mendelian disorders. This article reviews some recent applications of exome sequencing in the study of gene-related diseases.
Exome
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genetics
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Genetic Association Studies
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Genetic Diseases, Inborn
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genetics
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Humans
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Sequence Analysis, DNA
7.Genetics of complex diseases.
Journal of Zhejiang University. Science. B 2006;7(2):167-168
Approaches to the study of the genetic basis of common complex diseases and their clinical applications are considered. Monogenic Mendelian inheritance in such conditions is infrequent but its elucidation may help to detect pathogenic mechanisms in the more common variety of complex diseases. Involvement by multiple genes in complex diseases usually occurs but the isolation and identification of specific genes so far has been exceptional. The role of common polymorphisms as indicators of disease risk in various studies is discussed.
Genetic Diseases, Inborn
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genetics
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Genetic Predisposition to Disease
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Genetic Techniques
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Humans
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Inheritance Patterns
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Linkage Disequilibrium
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Models, Genetic
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Polymorphism, Genetic
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Risk Factors
9.Genotype analysis and personalized medicine.
Chinese Journal of Pathology 2011;40(10):651-654
10.Strategies for exome sequence data analysis for discovering genes underlying autosomal recessive disorders.
Zi-xiong ZHAN ; Zhao-ting HU ; Lu SHEN
Chinese Journal of Medical Genetics 2012;29(5):558-561
Introduced in 2009, whole-exome sequencing (WES) is a technology in which target capture methods are used to enrich sequences of coding regions of genes from fragmented total genomic DNA, which is followed by high-throughput sequencing of the captured fragments. As reported, WES has been successfully applied for discovering genes underlying several Mendelian diseases, especially autosomal recessive types. In this review, authors have summarized the main computational strategies which have been applied to identify novel autosomal recessive diseases genes using whole-exome data.
Cloning, Molecular
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Exome
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Genes, Recessive
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Genetic Diseases, Inborn
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genetics
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Humans
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Sequence Analysis, DNA