1.Genetic characteristics of the Korean isolate KI-1 of Toxoplasma gondii.
Aifen LIN ; Eun Hee SHIN ; Tae Yun KIM ; Jae Hwan PARK ; Sang Mee GUK ; Jong Yil CHAI
The Korean Journal of Parasitology 2005;43(1):27-32
Toxoplasma gondii tachyzoites were isolated from an ocular patient in the Republic of Korea and maintained in the laboratory (designated KI-1). In the present study, its genotype was determined by analyzing dense granule antigen 6 (GRA6) gene and surface antigen 2 (SAG2) gene as typing markers. Digestion of the amplification products of GRA6 and of the 5' and 3' ends of SAG2, respectively, with Mse I, Sau3A I, and Hha I, revealed that KI-1 is included in the genotype I, which includes the worldwide virulent RH strain. In addition, when the whole sequences of the coding regions of SAG1, rhoptry antigen 1 (ROP1), and GRA8 genes of KI-1 were compared with those of RH, minor nucleotide polymorphisms and amino acid substitutions were identified. These results show that KI-1 is a new geographical strain of T. gondii that can be included in the genotype I.
Amino Acid Sequence
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Animals
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Antigens, Protozoan/*genetics
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Base Sequence
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Genes, Protozoan
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Genotype
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Polymorphism, Genetic
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RNA, Protozoan
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Research Support, Non-U.S. Gov't
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Toxoplasma/*genetics
2.Cloning and expression of extracellular region gene located in N-terminus of Leishmania Donovani.
Xian CHEN ; Jianping CHEN ; Jia'nan XU ; Xin WANG ; Rui LU ; Dianxiang LU ; Xiaosu HO
Journal of Biomedical Engineering 2009;26(4):820-824
The objective of this study was to construct and express recombinant prokaryotic plasmid pET32a (+)- ast1 in E. coli BL21(DE3). Amastin gene was amplified from genomic DNA of Leishmania Donovani and its transmembran region was predicted by the methods of SOSUI and Tmpred; astl located in N-terminus of amastin gene was amplified and cloned into prokaryotic plasmid pET32a(+), which was named pET32a(+)-ast1, and then rAST1 was expressed in E. coli BL21(DE3). The results of SDS-PAGE and immunobloting assay showed that a fusion protein rAST1 (relative molecular mass about 27 kDa) was able to express in BL21. The recombinant prokaryotic plasmid pET32a(+)- ast1 was successfully constructed, and noted to be efficiently expressed in E. coli BL21(DE3).
Animals
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Cloning, Molecular
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Escherichia coli
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genetics
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metabolism
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Extracellular Space
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Genes, Protozoan
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Leishmania donovani
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genetics
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Plasmids
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genetics
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Protozoan Proteins
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biosynthesis
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genetics
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Recombinant Fusion Proteins
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biosynthesis
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genetics
3.Establishment of an in vitro tachyzoite-bradyzoite interconversion system for Toxoplasma gondii.
Jie-qiong DING ; Kun WU ; Feng TAN ; Xiao-guang CHEN
Journal of Southern Medical University 2010;30(4):668-671
OBJECTIVETo establish an tachyzoite-brachyzoite interconversion system for Toxoplasma gondii RH strain in vitro.
METHODSCOS-7 cells were inoculated with purified tachyzoites of T.gondii RH strain and cultured in vitro. The morphology of the cultured cells and parasites was observed and the total cellular RNA extracted on days 1 to 6 following the inoculation for detecting the expression of tachyzoite-specific protein (SAG1) and bradyzoite-specific proteins (BAG1 and SAG2C) using RT-PCR.
RESULTSWith the passage of time, the number of parasites in COS-7 cells increased but the proliferation rate was lowered gradually. The intracellular tachyzoites proliferated by means of budding and binary fission, which led to the changes in the alignment of the parasites in the cells from curved pairs, rosette or clustered, and semi-circular patterns to spherical encapsulation-like structures. These changes indicated the gradual transformation of the tachyzoites into bradyzoites. The expressions of the tachyzoite-specific SAG1 gene were detected throughout the 6 days of in vitro culture. The expression of the bradyzoite-specific BAG1 gene had been detected since the second day after the inoculation and SAG2C gene since the fifth day. Alteration of the culture condition resulted in gradual transformation of the bradyzoites into tachyzoites.
CONCLUSIONAn in vitro tachzoites-bradyzoite interconversion system for T.gondii has been successfully established, which provides the basis for further study of the mechanism of interconversion.
Animals ; COS Cells ; Cell Culture Techniques ; Cercopithecus aethiops ; Cysts ; Female ; Genes, Protozoan ; genetics ; Host-Parasite Interactions ; Mice ; Protozoan Proteins ; biosynthesis ; genetics ; Toxoplasma ; growth & development ; physiology
4.Molecular cloning of Plasmodium yoelii dynamin-like protein (PyDyn) gene and the immunological character of its domains.
Dong WANG ; Ying-hong MAO ; Heng WANG
Acta Academiae Medicinae Sinicae 2003;25(2):176-180
OBJECTIVETo identify and clone a new full ORF gene of PyDyn (Plasmodium yoelii dynamin-like protein), and examine the protection of their expression products.
METHODUsing the P. yoelii Genome technology and RT-PCR.
RESULTSThe full ORF gene of PyDyn was amplified from mRNA of the erythrocytic stage of P. yoelii., three domains of PyDyn were expressed in E. coli., and the fairly positive immunogenicity of them was showed by IFA. The full ORF gene of PyDyn was 2,433 bp and encode 811 amino acids. Its Gene Bank access number is AF458071. PyDyn belongs to the dynamin-like protein family according to its property.
CONCLUSIONThe new full ORF gene of PyDyn is obtained and identified; their expressed domains are probably new candidates for malaria vaccine.
Amino Acid Sequence ; Animals ; Base Sequence ; Cloning, Molecular ; Dynamins ; genetics ; immunology ; Escherichia coli ; genetics ; Genes, Protozoan ; genetics ; immunology ; Malaria Vaccines ; immunology ; Molecular Sequence Data ; Plasmodium yoelii ; chemistry ; genetics ; Protozoan Proteins ; genetics ; immunology ; Vaccines, Synthetic ; immunology
5.The MAK16 Gene of Entamoeba histolytica and Its Identification in Isolates from Patients.
Maria del Pilar CRISOSTOMO-VAZQUEZ ; Victor Alberto MAREVELEZ-ACOSTA ; Andres FLORES-LUNA ; Enedina JIMENEZ-CARDOSO
The Korean Journal of Parasitology 2014;52(4):429-433
To identify sequences of Entamoeba histolytica associated with the development of amebic liver abscess (ALA) in hamsters, subtractive hybridization of cDNA from E. histolytica HM-1:IMSS under 2 growth conditions was performed: 1) cultured in axenic medium and 2) isolated from experimental ALA in hamsters. For this procedure, 6 sequences were obtained. Of these sequences, the mak16 gene was selected for amplification in 29 cultures of E. histolytica isolated from the feces of 10 patients with intestinal symptoms and 19 asymptomatic patients. Only 5 of the 10 isolates obtained from symptomatic patients developed ALA and amplified the mak16 gene, whereas the 19 isolates from asymptomatic patients did not amplify the mak16 gene nor did they develop ALA. Based on the results of Fisher's exact test (P<0.001), an association was inferred between the presence of the mak16 gene of E. histolytica and the ability to develop ALA in hamsters and with the patient's symptoms (P=0.02). The amplification of the mak16 gene suggests that it is an important gene in E. histolytica because it was present in the isolates from hamsters that developed liver damage.
Adolescent
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Animals
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Cricetinae
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Entamoeba histolytica/*genetics
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Gene Expression
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*Genes, Protozoan
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Genetic Association Studies
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Humans
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Liver Abscess, Amebic/*genetics/*parasitology
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Male
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Virulence Factors/*genetics
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Young Adult
6.Presence of Cryptosporidium spp. and Giardia duodenalis in Drinking Water Samples in the North of Portugal.
Andre ALMEIDA ; Maria Joao MOREIRA ; Sonia SOARES ; Maria de Lurdes DELGADO ; Joao FIGUEIREDO ; Elisabete SILVA ; Antonio CASTRO ; Jose Manuel Correida Da COSA
The Korean Journal of Parasitology 2010;48(1):43-48
Cryptosporidium and Giardia are 2 protozoan parasites responsible for waterborne diseases outbreaks worldwide. In order to assess the prevalence of these protozoans in drinking water samples in the northern part of Portugal and the risk of human infection, we have established a long term program aiming at pinpointing the sources of surface water, drinking water, and environmental contamination, working with the water-supply industry. Total 43 sources of drinking water samples were selected, and a total of 167 samples were analyzed using the Method 1623. Sensitivity assays regarding the genetic characterization by PCR and sequencing of the genes, 18S SSU rRNA, for Cryptosporidium spp. and beta,-giardin for G. duodenalis were set in the laboratory. According to the defined criteria, molecular analysis was performed over 4 samples. Environmental stages of the protozoa were detected in 25.7% (43 out of 167) of the water samples, 8.4% (14 out of 167) with cysts of Giardia, 10.2% (17 out of 167) with oocysts of Cryptosporidium and 7.2% (12 out of 167) for both species. The mean concentrations were 0.1-12.7 oocysts of Cryptosporidium spp. per 10 L and 0.1-108.3 cysts of Giardia duodenalis per 10 L. Our results suggest that the efficiency in drinking water plants must be ameliorated in their efficiency in reducing the levels of contamination. We suggest the implementation of systematic monitoring programs for both protozoa. To authors' knowledge, this is the first report evaluating the concentration of environmental stages of Cryptosporidium and Giardia in drinking water samples in the northern part of Portugal.
Animals
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Cryptosporidium/*isolation & purification
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Cytoskeletal Proteins/genetics
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DNA, Protozoan/chemistry/genetics
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DNA, Ribosomal/chemistry/genetics
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Genes, rRNA
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Giardia lamblia/*isolation & purification
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Humans
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Molecular Sequence Data
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Polymerase Chain Reaction
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Portugal
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Protozoan Proteins/genetics
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RNA, Protozoan/genetics
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RNA, Ribosomal, 18S/genetics
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Risk Assessment
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Sequence Analysis, DNA
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Water/*parasitology
7.Identification of Atg8 Isoform in Encysting Acanthamoeba.
Eun Kyung MOON ; Yeonchul HONG ; Dong Il CHUNG ; Hyun Hee KONG
The Korean Journal of Parasitology 2013;51(5):497-502
Autophagy-related protein 8 (Atg8) is an essential component of autophagy formation and encystment of cyst-forming parasites, and some protozoa, such as, Acanthamoeba, Entamoeba, and Dictyostelium, have been reported to possess a type of Atg8. In this study, an isoform of Atg8 was identified and characterized in Acanthamoeba castellanii (AcAtg8b). AcAtg8b protein was found to encode 132 amino acids and to be longer than AcAtg8 protein, which encoded 117 amino acids. Real-time PCR analysis showed high expression levels of AcAtg8b and AcAtg8 during encystation. Fluorescence microscopy demonstrated that AcAtg8b is involved in the formation of the autophagosomal membrane. Chemically synthesized siRNA against AcAtg8b reduced the encystation efficiency of Acanthamoeba, confirming that AcAtg8b, like AcAtg8, is an essential component of cyst formation in Acanthamoeba. Our findings suggest that Acanthamoeba has doubled the number of Atg8 gene copies to ensure the successful encystation for survival when 1 copy is lost. These 2 types of Atg8 identified in Acanthamoeba provide important information regarding autophagy formation, encystation mechanism, and survival of primitive, cyst-forming protozoan parasites.
Acanthamoeba castellanii/cytology/*genetics/physiology
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Amebiasis/*parasitology
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Amino Acid Sequence
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Autophagy
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Cell Membrane/metabolism
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DNA, Protozoan/chemistry/genetics
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Gene Dosage
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Gene Silencing
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Genes, Reporter
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Humans
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Molecular Sequence Data
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Phagosomes/metabolism
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Protein Isoforms
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Protozoan Proteins/*genetics/metabolism
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RNA, Messenger/genetics
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RNA, Protozoan/genetics
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RNA, Small Interfering/chemical synthesis/genetics
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Recombinant Fusion Proteins
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Sequence Alignment
8.Chemotaxis: new role for Ras revealed.
Jianshe YAN ; Dale HERELD ; Tian JIN
Protein & Cell 2010;1(10):879-880
Animals
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Chemotaxis
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physiology
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Dictyostelium
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genetics
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metabolism
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physiology
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Genes, Protozoan
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genetics
;
physiology
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Genes, ras
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genetics
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physiology
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Phosphatidylinositol 3-Kinase
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genetics
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metabolism
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Protein-Serine-Threonine Kinases
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genetics
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metabolism
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Proto-Oncogene Proteins
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genetics
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metabolism
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Protozoan Proteins
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genetics
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metabolism
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Signal Transduction
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Transcription Factors
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genetics
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metabolism
9.PCR Detection and Molecular Characterization of Pentatrichomonas hominis from Feces of Dogs with Diarrhea in the Republic of Korea.
Yun Ah KIM ; Hye Youn KIM ; Shin Hyeong CHO ; Hyeong Il CHEUN ; Jae Ran YU ; Sang Eun LEE
The Korean Journal of Parasitology 2010;48(1):9-13
Pentatrichomonas hominis is considered a commensal protozoan in the large intestine of a number of mammalian hosts, such as cats, dogs, and non-human primates. The resulting infections, which can induce diarrhea, have been attributed to opportunistic overgrowth of P. hominis. This study was performed to confirm the P. hominis infection and its molecular characterization from the feces of puppies with diarrhea. Fecal samples were obtained from 14 German shepherd puppies with diarrhea over 1 week (7 females and 7 males, 2-9 months of age) residing on a dog farm in August 2007. Species-specific PCR assay identified P. hominis 18S rRNA genes in 3 of the 14 puppies (1 female and 2 males; 1 aged 2 months and 2 aged 9 months). This phylogenetic analysis established that P. hominis belonged to the 1st clade, which is comprised of Bos taurus and Felines.
Animals
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Base Sequence
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Cluster Analysis
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DNA, Protozoan/chemistry/genetics
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DNA, Ribosomal/chemistry/genetics
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Diarrhea/parasitology/*veterinary
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Dog Diseases/*parasitology
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Dogs
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Feces/*parasitology
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Female
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Genes, rRNA
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Male
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Molecular Sequence Data
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Phylogeny
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Polymerase Chain Reaction/methods
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Protozoan Infections, Animal/*parasitology
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RNA, Protozoan/genetics
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RNA, Ribosomal, 18S/genetics
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Republic of Korea
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Sequence Analysis, DNA
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Sequence Homology
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Trichomonadida/*classification/genetics/*isolation & purification
10.Isolation and characterization of a cDNA encoding a mammalian cathepsin L-like cysteine proteinase from Acanthamoeba healyi.
Yeon Chul HONG ; Mi Yul HWANG ; Ho Cheol YUN ; Hak Sun YU ; Hyun Hee KONG ; Tai Soon YONG ; Dong Il CHUNG
The Korean Journal of Parasitology 2002;40(1):17-24
We have cloned a cDNA encoding a cysteine proteinase of the Acanthamoeba healyi OC-3A strain isolated from the brain of a granulomatous amoebic encephalitis patient. A DNA probe for an A. healyi cDNA library screening was amplified by PCR using degenerate oligonucleotide primers designed on the basis of conserved amino acids franking the active sites of cysteine and asparagine residues that are conserved in the eukaryotic cysteine proteinases. Cysteine proteinase gene of A. healyi (AhCP1) was composed of 330 amino acids with signal sequence, a proposed pro-domain and a predicted active site made up of the catalytic residues, Cys(25), His(159), and Asn(175). Deduced amino acid sequence analysis indicated that AhCP1 belongs to ERFNIN subfamily of C1 peptidases. By Northern blot analysis, no direct correlation was observed between AhCP1 mRNA expression and virulence of Acanthamoeba, but the gene was expressed at higher level in amoebae isolated from soil than those from clinical samples. These findings raise the possibility that Ahcp1 protein may play a role in protein metabolism and digestion of phagocytosed bacteria or host tissue debris rather than in invasion of amoebae into host tissue.
Acanthamoeba/*enzymology/genetics/pathogenicity
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Amebiasis/parasitology
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Amino Acid Sequence
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Animals
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Base Sequence
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Cathepsins/*genetics
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DNA, Protozoan/chemistry/genetics/*isolation & purification
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Encephalitis/parasitology
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Gene Expression
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Genes, Protozoan
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Humans
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Molecular Sequence Data
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Polymerase Chain Reaction
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Protozoan Proteins/chemistry/genetics/physiology
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Sequence Alignment
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Virulence