1.Mitochondrial DNA mutations---candidate biomarkers for breast cancer diagnosis in Bangladesh.
Gazi Nurun Nahar SULTANA ; Atiqur RAHMAN ; Abu Din Ahmed SHAHINUZZAMAN ; Rowshan Ara BEGUM ; Chowdhury Faiz HOSSAIN
Chinese Journal of Cancer 2012;31(9):449-454
Breast cancer is a major health problem that affects more than 24% of women in Bangladesh. Further- more, among low-income countries including Bangladesh, individuals have a high risk for developing breast cancer. This study aimed to identify candidate mitochondrial DNA (mtDNA) biomarkers for breast cancer diagnosis in Bangladeshi women to be used as a preventive approach. We screened the blood samples from 24 breast cancer patients and 20 healthy controls to detect polymorphisms in the D-loop and the ND3- and ND4-coding regions of mtDNA by direct sequencing. Among 14 distinct mutations, 10 polymorphisms were found in the D-loop, 3 were found in the ND3-coding region, and 1 was found in the ND4-coding region. The frequency of two novel polymorphisms in the D-loop, one at position 16290 (T-ins) and the other at position 16293 (A-del), was higher in breast cancer patients than in control subjects (position 16290: odds ratio = 6.011, 95% confidence interval = 1.2482 to 28.8411, P = 0.002; position 16293: odds ratio = 5.6028, 95% confidence interval = 1.4357 to 21.8925, P = 0.010). We also observed one novel mutation in the ND3-coding region at position 10316 (A > G) in 69% of breast cancer patients but not in control subjects. The study suggests that two novel polymorphisms in the D-loop may be candidate biomarkers for breast cancer diagnosis in Bangladeshi women.
Adult
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Aged
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Bangladesh
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Biomarkers, Tumor
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metabolism
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Breast Neoplasms
;
diagnosis
;
genetics
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DNA Primers
;
genetics
;
DNA, Mitochondrial
;
genetics
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Female
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Humans
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Middle Aged
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Mutation
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Odds Ratio
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Polymerase Chain Reaction
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Polymorphism, Genetic