1.Advances in the regulation of gut microbiota metabolites by traditional Chinese medicine in the treatment of diseases.
Deyi YANG ; Jinghan LIN ; Tao WANG ; Hongwei LIU
Chinese Journal of Biotechnology 2025;41(6):2236-2255
Traditional Chinese medicine (TCM) plays an important role in preventing and treating diseases and improving human health. However, the complex bioactive components and regulation of signaling pathway and network restrict the elucidation of the mechanisms of action of TCM. A human being is regarded as a super "symbiont" composed of body cells and commensal microorganisms. Gut microbiota is the core commensal microorganism system of a human body, being considered as "the second genome" and the new "organ". Alterations in gut microbiota reflect the state of body health and progression of diseases. Recent investigations have revealed that the TCM rich in polysaccharides and polyphenols can modulate gut microbiota metabolites to rehabilitate gut homeostasis, thus ameliorating diseases via regulating gut-liver axis or gut-brain axis. This review summarizes the causal relationship and mechanisms of action of TCM in the treatment of diseases from the perspective of gut microbiota metabolites. Our findings are expected to provide new insights into the mechanisms of TCM in preventing and treating diseases and guidance for TCM-based drug discovery in the future.
Humans
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Gastrointestinal Microbiome/physiology*
;
Medicine, Chinese Traditional/methods*
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Drugs, Chinese Herbal/therapeutic use*
;
Polyphenols/pharmacology*
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Polysaccharides/pharmacology*
2.Mining and dietary interventions of gut microbiota-derived metabolites.
Qixing NIE ; Shanshan ZHANG ; Chunhua CHEN ; Jianqiao ZOU ; Shaoping NIE
Chinese Journal of Biotechnology 2025;41(6):2275-2289
The intestine is a complex symbiotic system, and the gut microbiota is closely related to host health. Studies have indicated that the gut microbiota influences physiological functions of the host by producing a variety of metabolites, which act as signaling molecules and substrates for metabolic reactions in the host. Dysbiosis of the gut microbiota affects the abundance of gut microbiota-derived metabolites, thereby influencing host health by disrupting signal transduction in multiple organs. Additionally, dietary compounds can shape the gut microbiota, affecting gut microbiota-derived metabolite levels and regulating host metabolism. This article introduces the methods for mining gut microbiota-derived metabolites, reviews the roles of these metabolites in metabolic diseases and related dietary interventions. Which provides a perspective on the prevention and treatment of metabolic diseases by targeting these metabolites, enriching the knowledge on the role of gut microbiota in the regulation of host metabolism.
Gastrointestinal Microbiome/physiology*
;
Humans
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Dysbiosis/microbiology*
;
Metabolic Diseases/metabolism*
;
Diet
3.Association between gut microbiota and hyperuricemia: insights into innovative therapeutic strategies.
Shujuan ZHANG ; Xiaoqiu LIU ; Yuxin ZHONG ; Yu FU
Chinese Journal of Biotechnology 2025;41(6):2290-2309
Uric acid (UA) is the final metabolite of purines in the human body. An imbalance in UA production and excretion that disrupts homeostasis leads to elevated blood UA levels and the development of hyperuricemia (HUA). Approximately one-third of UA is excreted through the intestinal tract. As a crucial component of the intestinal microenvironment, the gut microbiota plays a pivotal role in regulating blood UA levels. Alterations or imbalances in gut microbiota composition are linked to the onset of HUA, which implies the potential of gut microbiota as a novel target for the prevention and treatment of HUA. This review introduces the occurrence mechanism and damage of hyperuricemia, examines the association between HUA and the gut microbiota and their metabolites, and explores the molecular mechanisms underlying gut microbiota-targeted therapies for HUA. Furthermore, it discusses the potential applications of probiotics, prebiotics, and traditional Chinese medicine (including both single herbs and compound formulas) with UA-lowering effects, along with cutting-edge technologies such as fecal microbiota transplantation and machine learning in HUA treatment. This review provides valuable perspectives and strategies for improving the prevention and treatment of HUA.
Hyperuricemia/microbiology*
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Humans
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Gastrointestinal Microbiome/physiology*
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Probiotics/therapeutic use*
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Uric Acid/blood*
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Fecal Microbiota Transplantation
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Prebiotics
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Medicine, Chinese Traditional
4.Development of a dietary factor evaluation method based on the gut microbiota health index.
Zixin YANG ; Heqiang XIE ; Jinlin ZHU ; Hongchao WANG ; Wenwei LU
Chinese Journal of Biotechnology 2025;41(6):2373-2387
The gut microbiota is closely related to human health, and various gut microbiota health indices have been developed to assist in evaluating the health of the gut microbiota and even the overall health of the human body. Diets are one of the main factors that regulate the gut microbiota, while there is still no good method for evaluating the regulatory effects of dietary factors. To assess the regulatory effects of dietary factors on the gut microbiota of overweight individuals, we conducted an in vitro fermentation experiment based on 17 dietary factors, and developed an evaluation method for the regulatory effects of dietary factors based on the health index with principal component analysis (hiPCA). The results showed that most dietary factors had positive regulatory effects on the gut microbiota of overweight individuals. Galactooligosaccharides (GOS) and puerarin were the most significant dietary factors in regulating the gut microbiota of overweight individuals. The analysis of the contribution of species to the hiPCA indicated that GOS and puerarin might inhibit the activities of bacteria associated with overweight by regulating Eubacterium dolichum, Lactobacillus salivarius, Clostridium clostridioforme, Clostridium citroniae, and Lachnospiraceae bacterium 9_1_43BFAA. In addition, GOS may further enhance the inhibition of these activities by regulating Lachnospiraceae bacterium 6_1_63FAA, thereby reducing the gut health risks in overweight individuals. In summary, this study evaluated the health effects of dietary factors based on the hiPCA and specifically analyzed the role of different dietary factors in regulating the gut microbiota of overweight individuals. This provides new ideas and methods for improving gut microbiota health and has potential applications in the field of precision nutrition.
Humans
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Gastrointestinal Microbiome/physiology*
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Isoflavones/pharmacology*
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Overweight/microbiology*
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Diet
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Fermentation
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Oligosaccharides/pharmacology*
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Principal Component Analysis
5.Research progress on the relationship between gut microbiota and childhood bronchial asthma.
Lei YU ; Mao-Lan WU ; Xiang-Rong ZHENG
Chinese Journal of Contemporary Pediatrics 2025;27(5):623-628
Bronchial asthma (asthma) is a complex inflammatory airway disease affecting approximately 100 million children worldwide, imposing a heavy burden on society and families. Studies have shown that the gut microbiota plays a significant role in the occurrence and development of childhood asthma. This paper reviews the research progress on the relationship between gut microbiota and childhood asthma. By elucidating the composition, function, and relationship with the host of gut microbiota, the impact of changes in its composition and function on the development of asthma is revealed. Furthermore, the potential value and application prospects of modulating gut microbiota as a new strategy for asthma treatment are discussed, providing a theoretical reference for in-depth research on the relationship between gut microbiota and the onset of childhood asthma and the development of new therapeutic approaches.
Humans
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Asthma/etiology*
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Gastrointestinal Microbiome/physiology*
;
Child
6.The microbiota-gut-brain axis in childhood attention-deficit/hyperactivity disorder: mechanisms and therapeutic advances.
Ying-Lun YUAN ; Yong-Mei LAN ; Lin-Mei GUO
Chinese Journal of Contemporary Pediatrics 2025;27(11):1426-1432
Attention-deficit/hyperactivity disorder (ADHD) is a common neurodevelopmental disorder in children. Growing evidence links ADHD to gut microbiota dysbiosis, positioning the microbiota-gut-brain axis as a new focus of childhood ADHD research. This review systematically elucidates the association between gut dysbiosis and childhood ADHD and analyzes key mechanisms by which the microbiota-gut-brain axis regulates bidirectional gut-brain communication through multiple pathways. It highlights recent findings on microbiota-targeted strategies to improve ADHD symptoms and discusses therapeutic prospects, with the aim of exploring new avenues for early intervention and treatment in children with ADHD.
Humans
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Attention Deficit Disorder with Hyperactivity/microbiology*
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Gastrointestinal Microbiome/physiology*
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Child
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Brain/physiology*
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Dysbiosis
7.Research progress in the role of gut microbiota in ethanol metabolism.
Yuchun YANG ; Xiaojie ZHANG ; Ti CHEN
Journal of Central South University(Medical Sciences) 2025;50(3):501-510
In recent years, gut microbiota has been increasingly recognized as a key player in ethanol metabolism and the development of related diseases. On one hand, ethanol intake directly affects the gut, leading to significant alterations in microbial diversity and composition. On the other hand, gut microbiota influences ethanol-induced damage to various organs, especially the liver, through multiple metabolic byproducts (such as short-chain fatty acids like butyrate, propionate, and acetate), modulation of immune responses, alteration of intestinal barrier function, and regulation of ethanol-metabolizing enzymes. Given the close association between gut microbiota and ethanol metabolism, the gut microbiome presents a promising therapeutic target for alcohol-related liver diseases. This review summarizes recent advances in understanding how gut microbiota affects ethanol metabolism, aiming to elucidate its role in the onset and progression of ethanol-related diseases and to provide a theoretical basis and novel targets for microbiota-based interventions.
Gastrointestinal Microbiome/physiology*
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Ethanol/metabolism*
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Humans
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Fatty Acids, Volatile/metabolism*
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Liver Diseases, Alcoholic/metabolism*
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Animals
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Alcohol Drinking/metabolism*
8.Mechanisms by which the gut microbiota regulates depressive disorder via the tryptophan metabolic pathway.
Jing DU ; Jiao LI ; Pule LIU ; Yan ZHANG ; Qiangli DONG ; Ning YANG ; Xinru LIU
Journal of Central South University(Medical Sciences) 2025;50(7):1263-1270
The relationship between gut microbiota and depressive disorder has become a research focus in recent years. Within the microbiota-gut-brain axis, the gut microbiota influences the onset and progression of depressive disorder primarily through the tryptophan metabolic pathway. Tryptophan, an essential amino acid in humans, is subject to dual regulation by intestinal microorganisms, which modulate its metabolic balance via inflammatory stimulation and microbial metabolite production. In depression, excessive activation of the kynurenine branch of tryptophan metabolism leads to the accumulation of proinflammatory and neurotoxic metabolites, thereby exacerbating neuroinflammation in the brain. Intervention studies indicate that the antidepressant-like effects of probiotics and traditional Chinese medicine are associated with remodeling of the gut microbiota, restoration of tryptophan metabolic balance, and alleviation of neuroinflammation. Furthermore, targeted inhibition of kynurenine 3-monooxygenase can mitigate neuroinflammation by regulating microglial activity, thus improving depressive-like behaviors. In summary, the metabolite-inflammation axis represents a central node in the interaction regulation between tryptophan metabolism and the microbiota-gut-brain axis. This provides a theoretical foundation for developing novel therapeutic strategies targeting depression through modulation of gut microbiota-mediated tryptophan metabolism.
Tryptophan/metabolism*
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Gastrointestinal Microbiome/physiology*
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Humans
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Depressive Disorder/microbiology*
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Probiotics/therapeutic use*
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Brain/metabolism*
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Kynurenine/metabolism*
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Metabolic Networks and Pathways
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Animals
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Medicine, Chinese Traditional
9.Research progress in gut microbiota and metabolism in the pathogenesis of chronic urticaria.
Meiyun JIANG ; Jiayi WANG ; Cong PENG ; Jie LI
Journal of Central South University(Medical Sciences) 2025;50(7):1271-1281
Chronic urticaria (CU) is a persistent immune-mediated skin disease with an incompletely understood pathogenesis. As the largest micro-ecosystem in the human body, the gut microbiota participates in complex metabolic processes and produces a wide range of metabolites. The gut microbiota-metabolism axis plays a crucial role in the onset and progression of CU. Patients with CU commonly exhibit gut dysbiosis, characterized by a reduction in beneficial bacteria and an increase in opportunistic pathogens, accompanied by alterations in key metabolites. These changes may disrupt the intestinal barrier and modulate the function of immune cells such as mast cells and T cells, thereby triggering or aggravating distal cutaneous inflammation and contributing to CU pathophysiology. Certain bacterial taxa and metabolites hold promise as potential biomarkers for CU diagnosis, therapeutic response, and prognosis, while interventions targeting gut microbiota have demonstrated potential in ameliorating CU symptoms. Elucidating the characteristics and mechanistic roles of gut microbiota and metabolism in CU could provide a theoretical basis for developing novel individualized diagnostic and therapeutic strategies.
Humans
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Gastrointestinal Microbiome/physiology*
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Chronic Urticaria/etiology*
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Dysbiosis/complications*
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Mast Cells
10.New perspectives on microbiome-dependent gut-brain pathways for the treatment of depression with gastrointestinal symptoms: from bench to bedside.
Menglin LIU ; Genhao FAN ; Lingkai MENG ; Kuo YANG ; Huayi LIU
Journal of Zhejiang University. Science. B 2025;26(1):1-25
Patients with depression are more likely to have chronic gastrointestinal (GI) symptoms than the general population, but such symptoms are considered only somatic symptoms of depression and lack special attention. There is a chronic lack of appropriate diagnosis and effective treatment for patients with depression accompanied by GI symptoms, and studying the association between depression and GI disorders (GIDs) is extremely important for clinical management. There is growing evidence that depression is closely related to the microbiota present in the GI tract, and the microbiota-gut-brain axis (MGBA) is creating a new perspective on the association between depression and GIDs. Identifying and treating GIDs would provide a key opportunity to prevent episodes of depression and may also improve the outcome of refractory depression. Current studies on depression and the microbially related gut-brain axis (GBA) lack a focus on GI function. In this review, we combine preclinical and clinical evidence to summarize the roles of the microbially regulated GBA in emotions and GI function, and summarize potential therapeutic strategies to provide a reference for the study of the pathomechanism and treatment of depression in combination with GI symptoms.
Humans
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Gastrointestinal Microbiome/physiology*
;
Depression/microbiology*
;
Gastrointestinal Diseases/physiopathology*
;
Brain
;
Animals
;
Brain-Gut Axis
;
Gastrointestinal Tract/microbiology*

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