1.Research Advances in the Role of RAS-GTPase-activating Proteins in Tumors.
Acta Academiae Medicinae Sinicae 2015;37(3):364-369
A variety of molecules are involved in tumorigenesis,during which the RAS pathway-related molecules play key roles. RAS gene mutations exist in about 30% of human tumors;in some tumors(e.g. pancreatic adenocarcinomas),the mutation rates may rise to 75%-95%. Even in tumors without RAS mutations,the RAS pathway-related molecules can also be highly activated. RAS-GTPase-activating proteins(RASGAPs)are a group of tumor suppressors. They normally turn off RAS pathway by catalyzing the hydrolysis of RAS-GTP. However,the mutation or hypermethylation of their promoters will inactivate their roles and thus provide an alternative mechanism of activating Ras. This article reviews the research advances in the role of RASGAPs in the development of tumors.
Cell Transformation, Neoplastic
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DNA Methylation
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Genes, ras
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Humans
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Mutation
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Neoplasms
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ras GTPase-Activating Proteins
2.Gene therapy strategies and prospects for neurofibromatosis type 1.
Tingting ZHENG ; Beiyao ZHU ; Zhichao WANG ; Qingfeng LI
Chinese Journal of Reparative and Reconstructive Surgery 2024;38(1):1-8
OBJECTIVE:
To summarize the gene therapy strategies for neurofibromatosis type 1 (NF1) and related research progress.
METHODS:
The recent literature on gene therapy for NF1 at home and abroad was reviewed. The structure and function of the NF1 gene and its mutations were analyzed, and the current status as well as future prospects of the transgenic therapy and gene editing strategies were summarized.
RESULTS:
NF1 is an autosomal dominantly inherited tumor predisposition syndrome caused by mutations in the NF1 tumor suppressor gene, which impair the function of the neurofibromin and lead to the disease. It has complex clinical manifestations and is not yet curable. Gene therapy strategies for NF1 are still in the research and development stage. Existing studies on the transgenic therapy for NF1 have mainly focused on the construction and expression of the GTPase-activating protein-related domain in cells that lack of functional neurofibromin, confirming the feasibility of the transgenic therapy for NF1. Future research may focus on split adeno-associated virus (AAV) gene delivery, oversized AAV gene delivery, and the development of new vectors for targeted delivery of full-length NF1 cDNA. In addition, the gene editing tools of the new generation have great potential to treat monogenic genetic diseases such as NF1, but need to be further validated in terms of efficiency and safety.
CONCLUSION
Gene therapy, including both the transgenic therapy and gene editing, is expected to become an important new therapeutic approach for NF1 patients.
Humans
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Neurofibromatosis 1/pathology*
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Neurofibromin 1/metabolism*
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GTPase-Activating Proteins
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Mutation
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Genetic Predisposition to Disease
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Genetic Therapy
3.Identification of a novel SYNGAP1 mutation in a child with intellectual disability.
Jing LU ; Yi ZHANG ; Cong HAN ; Jiayi ZHU ; Jian WANG ; Ruen YAO
Chinese Journal of Medical Genetics 2019;36(7):716-719
OBJECTIVE:
To report on a child with mental retardation caused by SYNGAP1 gene mutation.
METHODS:
Peripheral blood samples were collected from the proband and her parents. High throughput sequencing (HTS) was employed for screening for potential mutation in the patient. Suspected mutation was validated by Sanger sequencing of the child and her parents.
RESULTS:
By HTS, a previously unknown mutation [c.1656C>A (p.C552*)] was found in exon 10 of the SYNGAP1 gene in the proband. Sanger sequencing confirmed the heterozygous nature of the mutation and that neither of her parents carried the same mutation.
CONCLUSION
The dysmorphism and developmental delay of the child were probably due to the pathogenic mutation of the SYNGAP1 gene. HTS can facilitate elucidation of the genetic etiology with efficiency, which has great significance in the diagnosis, treatment and prognosis of the child.
Child
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Exons
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Female
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Heterozygote
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High-Throughput Nucleotide Sequencing
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Humans
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Intellectual Disability
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genetics
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Mutation
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ras GTPase-Activating Proteins
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genetics
4.A case of mental retardation caused by a frameshift variant of SYNGAP1 gene.
Yue SHEN ; Guanjun LUO ; Chao LU ; Yuan TAN ; Tingting CHENG ; Xuguang QIAN ; Nuo LI ; Minna LUO ; Zongfu CAO ; Xu MA ; Yong ZHAO
Chinese Journal of Medical Genetics 2023;40(1):57-61
OBJECTIVE:
To explore the genetic basis for a child with mental retardation.
METHODS:
Whole exome sequencing was carried out for the child. Candidate variant was screened based on his clinical features and verified by Sanger sequencing.
RESULTS:
The child was found to harbor a c.995_1002delAGACAAAA(p.Asp332AlafsTer84) frameshift variant in the SYNGAP1 gene. Bioinformatic analysis suggested it to be pathogenic. The same variant was not detected in either parent.
CONCLUSION
The c.995_1002delAGACAAAA(p.Asp332AlafsTer84) frameshift variant of the SYNGAP1 gene probably underlay the mental retardation in this child. Above finding has expanded the spectrum of SYNGAP1 gene variants and provided a basis for the diagnosis and treatment for this child.
Child
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Humans
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Intellectual Disability/genetics*
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Frameshift Mutation
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High-Throughput Nucleotide Sequencing
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Computational Biology
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Heterozygote
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Mutation
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ras GTPase-Activating Proteins/genetics*
5.Autosomal dominant mental retardation type 5 caused by SYNGAP1 gene mutations: a report of 8 cases and literature review.
Xiao-Le WANG ; Ya-Nan TIAN ; Chen CHEN ; Jing PENG
Chinese Journal of Contemporary Pediatrics 2023;25(5):489-496
OBJECTIVES:
To summarize the clinical phenotype and genetic characteristics of children with autosomal dominant mental retardation type 5 caused by SYNGAP1 gene mutations.
METHODS:
A retrospective analysis was performed on the medical data of 8 children with autosomal dominant mental retardation type 5 caused by SYNGAP1 gene mutations who were diagnosed and treated in the Department of Pediatrics, Xiangya Hospital of Central South University.
RESULTS:
The mean age of onset was 9 months for the 8 children. All children had moderate-to-severe developmental delay (especially delayed language development), among whom 7 children also had seizures. Among these 8 children, 7 had novel heterozygous mutations (3 with frameshift mutations, 2 with nonsense mutations, and 2 with missense mutations) and 1 had 6p21.3 microdeletion. According to the literature review, there were 48 Chinese children with mental retardation caused by SYNGAP1 gene mutations (including the children in this study), among whom 40 had seizures, and the mean age of onset of seizures was 31.4 months. Frameshift mutations (15/48, 31%) and nonsense mutations (19/48, 40%) were relatively common in these children. In terms of treatment, among the 33 children with a history of epileptic medication, 28 (28/33, 85%) showed response to valproic acid antiepileptic treatment and 16 (16/33, 48%) achieved complete seizure control after valproic acid monotherapy or combined therapy.
CONCLUSIONS
Children with autosomal dominant mental retardation type 5 caused by SYNGAP1 gene mutations tend to have an early age of onset, and most of them are accompanied by seizures. These children mainly have frameshift and nonsense mutations. Valproic acid is effective for the treatment of seizures in most children.
Child
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Humans
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Intellectual Disability/diagnosis*
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Codon, Nonsense
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Retrospective Studies
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Valproic Acid
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ras GTPase-Activating Proteins/genetics*
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Mutation
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Seizures/genetics*
6.Toxoplasma gondii infection induces cell apoptosis via multiple pathways revealed by transcriptome analysis.
Kaige DU ; Fei LU ; Chengzuo XIE ; Haojie DING ; Yu SHEN ; Yafan GAO ; Shaohong LU ; Xunhui ZHUO
Journal of Zhejiang University. Science. B 2022;23(4):315-327
Toxoplasma gondii is a worldwide parasite that can infect almost all kinds of mammals and cause fatal toxoplasmosis in immunocompromised patients. Apoptosis is one of the principal strategies of host cells to clear pathogens and maintain organismal homeostasis, but the mechanism of cell apoptosis induced by T. gondii remains obscure. To explore the apoptosis influenced by T. gondii, Vero cells infected or uninfected with the parasite were subjected to apoptosis detection and subsequent dual RNA sequencing (RNA-seq). Using high-throughput Illumina sequencing and bioinformatics analysis, we found that pro-apoptosis genes such as DNA damage-inducible transcript 3 (DDIT3), growth arrest and DNA damage-inducible α (GADD45A), caspase-3 (CASP3), and high-temperature requirement protease A2 (HtrA2) were upregulated, and anti-apoptosis genes such as poly(adenosine diphosphate (ADP)-ribose) polymerase family member 3 (PARP3), B-cell lymphoma 2 (Bcl-2), and baculoviral inhibitor of apoptosis protein (IAP) repeat containing 5 (BIRC5) were downregulated. Besides, tumor necrosis factor (TNF) receptor-associated factor 1 (TRAF1), TRAF2, TNF receptor superfamily member 10b (TNFRSF10b), disabled homolog 2 (DAB2)-interacting protein (DAB2IP), and inositol 1,4,5-trisphosphate receptor type 3 (ITPR3) were enriched in the upstream of TNF, TNF-related apoptosis-inducing ligand (TRAIL), and endoplasmic reticulum (ER) stress pathways, and TRAIL-receptor 2 (TRAIL-R2) was regarded as an important membrane receptor influenced by T. gondii that had not been previously considered. In conclusion, the T. gondii RH strain could promote and mediate apoptosis through multiple pathways mentioned above in Vero cells. Our findings improve the understanding of the T. gondii infection process through providing new insights into the related cellular apoptosis mechanisms.
Animals
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Apoptosis
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Chlorocebus aethiops
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Gene Expression Profiling
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Humans
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Mammals/genetics*
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Toxoplasma/genetics*
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Toxoplasmosis/pathology*
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Vero Cells
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ras GTPase-Activating Proteins/genetics*
7.Correlation of early neurodevelopmental features of children with SYNGAP1 variants and their genotypes.
Haoran LIU ; Shenghai YANG ; Jiayi LI ; Hua XIE ; Xiaoli CHEN
Chinese Journal of Medical Genetics 2024;41(1):25-31
OBJECTIVE:
To explore the early neurodevelopmental features of young children with SYNGAP1 variants and their genotype-phenotype correlation.
METHODS:
Young children with neurodevelopmental disorders (NDDs) (< 5 years old) who were referred to the Children's Hospital Affiliated to the Capital Institute of Pediatrics between January 2019 and July 2022 were selected as the study subjects. All children had undergone whole-exome sequencing, comprehensive pediatric neuropsychological assessment, familial segregation analysis, and pathogenicity classification. Meanwhile, young Chinese NDD children (< 5 years old) with pathogenic/likely pathogenic SYNGAP1 variants were retrieved from the literature, with information including detailed clinical and genetic testing, neurodevelopmental quotient (DQ) of the Children Neuropsychological and Behavior Scale-Revision 2016 (CNBS-R2016). Children who did not have a detailed DQ but had their developmental status assessed by a medical professional were also included. The correlation between neurodevelopmental severity, comorbidity and SYNGAP1 variants were summarized.
RESULTS:
Four young NDD children carrying SYNGAP1 variants were recruited (1 male and 3 females, with a mean age of 34.0 ± 18.2 months), among whom one harboring a novel variant (c.437C>G, p.S146*). Combined with 19 similar cases retrieved from the literature, 23 Chinese NDD young children were included in our study (8 males and 10 females, 5 with unknown sex, with a mean age of 37.1 ± 14.2 months). A loss of function (LOF) variant was found in 19 (82.6%) children. All of the children had presented global developmental delay (GDD) before the age of two. In addition, 16 (69.6%) had seizure/epilepsy at the age of 27.0 ± 12.1 months, among whom 15 had occurred independent of the global developmental delay. Myoclonic and absence were common types of seizures. Compared with those with variants of exons 8 to 15, the severity of developmental delay was milder among children with variants in exons 1 to 5.
CONCLUSION
The early neurodevelopment features of the SYNGAP1 variants for young children (< 5 years old) have included global developmental delay and seizure/epilepsy. All of the children may present GDD before the age of two. The severity of developmental delay may be related to the type and location of the SYNGAP1 variants.
Child, Preschool
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Female
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Humans
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Infant
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Male
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Epilepsy/genetics*
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Genetic Testing
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Genotype
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Neurodevelopmental Disorders/genetics*
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ras GTPase-Activating Proteins/genetics*
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Seizures/genetics*
8.G3BP: a promising target for cancer therapy.
Acta Pharmaceutica Sinica 2010;45(8):945-951
G3BP (Ras-GTPase-activating protein SH3 domain binding protein), a protein which binds to RasGAP SH3 domain, belongs to RNA-binding protein family, implicating in the downstream of Ras signaling. G3BP harbors the activities of endoribonuclease and DNA helicase, and can induce stress granules formation. G3BP plays a general role in the signal pathways of cell proliferation, differentiation, apoptosis and RNA metabolism. It has been shown to be over-expressed in a number of human malignancies and has a close relationship with tumor invasion and metastasis. Given that it has been implicated in several pathways that are known to be involved in cancer biology, G3BP may provide a new target for cancer therapy.
Animals
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Carrier Proteins
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genetics
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metabolism
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DNA Helicases
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Drug Delivery Systems
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GTPase-Activating Proteins
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therapeutic use
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Humans
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Molecular Sequence Data
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Neoplasms
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drug therapy
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metabolism
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pathology
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Peptide Fragments
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therapeutic use
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Phosphorylation
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Poly-ADP-Ribose Binding Proteins
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RNA Helicases
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RNA Recognition Motif Proteins
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Signal Transduction
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ras GTPase-Activating Proteins
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metabolism
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src Homology Domains
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genetics
9.RGS Proteins and Opioid Signaling.
Kyung Seon KIM ; Pamela Pierce PALMER ; Ki Jun KIM
The Korean Journal of Pain 2006;19(1):8-16
The regulators of the G protein signaling (RGS) proteins are responsible for the rapid acceleration of the GTPase-activity intrinsic to the heterotrimeric G protein alpha subunits. As GTPase-activating proteins (GAP), the RGS proteins negatively regulate the G-protein signals. Recently, the RGS proteins are known to be one of the important regulators of opioid signal transduction and the development of tolerance. The aim of this study was to review the recent discovery and understanding of the role of RGS proteins in opioid signaling and the development of tolerance. This information will be useful for medical personnel, particularly those involved in anesthesia and pain medicine, by helping them improve the effective use of opioids and develop new drugs that can prevent opioid tolerance.
Acceleration
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Analgesics, Opioid
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Anesthesia
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GTP-Binding Protein alpha Subunits
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GTP-Binding Proteins
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GTPase-Activating Proteins
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RGS Proteins*
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Signal Transduction
10.Mutational Analysis of the NF1 Gene in Two Families with Neurofibromatosis 1 Accompanied by Pheochromocytoma.
Hyon Seung YI ; Sei Hyun KIM ; Jihoon KIM ; Eun Jin BAE ; Suntaek HONG ; Ie Byung PARK ; Yu Jin KIM ; Sihoon LEE
Endocrinology and Metabolism 2011;26(2):177-184
Neurofibromatosis type 1 (NF1) is one of the most common autosomal dominant inherited disorders affecting the nervous system. NF1 is associated with mutations in the NF1 gene, which is located on chromosome sub-band 17q11.2 and contains 57 exons spanning approximately 300 kb of genomic DNA. NF1 is caused by a loss of function mutation of the NF1 gene, a tumor suppressor gene, which encodes for neurofibromin, a GTPase-activating protein (GAP) involved in the negative regulation of Ras activity. The GAP-related domain, which is encoded for by exons 20-27a, is one of the most important functional domains in neurofibromin. The cysteine-serine-rich domain has been recognized as an important functional domain in NF1-related pheochromocytomas. As the result of many genetic analyses of NF1-related pheochromocytomas, pheochromocytoma has generally been recognized as a true component of NF1. We recently experienced two families with NF1 accompanied by pheochromocytoma. The proband of family 1 is a 31-year-old female diagnosed with NF1 and pheochromocytoma. Gene analysis of the proband and her sister showed that the mutation of the NF1 gene (c.7907+1G>A) led to the skipping of exon 53 during NF1 mRNA splicing. The proband of family 2 is a 48-year-old male who was diagnosed with the same condition. Gene analysis demonstrated the mutation of the NF1 gene (c.5206-8C>G) with missplicing of exon 37. These novel germline mutations did not fall into the GAP-related nor the cysteine-serine-rich domains, but into the C-terminal area of the NF1 gene. This suggests that the correlation between the genotype and phenotype of NF1-related pheochromocytoma is somewhat difficult to characterize. Further studies will be necessary to confirm the function of the C-terminal area of the NF1 gene and its contribution to the development of NF1 and pheochromocytoma.
Adult
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DNA
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Exons
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Female
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Genes, Neurofibromatosis 1
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Genes, Tumor Suppressor
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Genotype
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Germ-Line Mutation
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GTPase-Activating Proteins
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Humans
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Male
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Middle Aged
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Nervous System
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Neurofibromatoses
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Neurofibromatosis 1
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Neurofibromin 1
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Phenotype
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Pheochromocytoma
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RNA, Messenger
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Siblings