1.Design of an FPGA-based image guided surgery hardware platform.
Chinese Journal of Medical Instrumentation 2008;32(4):265-274
An FPGA-Based Image Guided Surgery Hardware Platform has been designed and implemented in this paper. The hardware platform can provide hardware acceleration for image guided surgery. It is completed with a video decoder interface, a DDR memory controller, a 12C bus controller, an interrupt controller and so on. It is able to perform real time video endoscopy image capturing in the surgery and to preserve the hardware interface for image guided surgery algorithm module.
Algorithms
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Endoscopy
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methods
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Equipment Design
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Software
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Surgery, Computer-Assisted
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instrumentation
2.Comparative study of the cytotoxicity induced by chrysotile asbestos, rock wool and substitute fibers in vitro.
Jian-Jun DENG ; Fa-Qin DONG ; Li-Ming WANG ; Si-Yang GAN ; Jian LIU ; Ya-Li ZENG
Chinese Journal of Industrial Hygiene and Occupational Diseases 2011;29(7):535-537
OBJECTIVETo study the cytotoxicity induced by chrysotile asbestos (CA), rock wool (RW) and wollastonite (WS).
METHODSV79 cells were divided into 4 groups. i.e. CA group, WS group, RW group and control group (200 microl PBS). The exposure concentration of dusts was 100 mg/L, The cell viability was detected by MTT and lactate dehydrogenase (LDH) activity assays. The technique of scanning electron microscopy was used to examine the change of V79 cells.
RESULTSSiO2 was main constituent for 3 kinds of dusts. In MTT assay, the cell viability of RW and WS groups was 64.8% and 65.7%, respectively, which were significantly higher than that (54.5%) of CA group (P < 0.01). In LDH assay, the LDH activity of RW and WS groups [(15.7 +/- 50.9), (12.3 +/- 3.7) U/L, respectively] was significantly lower than that [(20.2 +/- 0.9) U/L] of CA group (P < 0.05). In scanning electron microscopy examination, it was found that the two ends of V79 cells in CA group contained a great deal of fibers remaining bodies, but the V79 cell appearance in RW and WS groups was normal.
CONCLUSIONThe cytotoxicity induced by RW and WS is significantly lower than that induced by CA for V79 cell.
Animals ; Asbestos, Serpentine ; toxicity ; Calcium Compounds ; toxicity ; Cell Line ; drug effects ; Cricetinae ; Cytotoxins ; toxicity ; Lactate Dehydrogenases ; metabolism ; Mineral Fibers ; toxicity ; Silicates ; toxicity
3.Sequence analysis of HLA-B*4061 allele newly found.
Wei ZHANG ; Qin-Feng LÜ ; Wei WANG ; Zhe-Dong HAN ; Fa-Ming ZHU ; Li-Xing YAN
Journal of Experimental Hematology 2006;14(6):1188-1190
The aim of this study was aimed to investigate the molecular genetic basis for a novel HLA allele, HLA-B*4061, in Chinese population. DNA was extracted from whole blood by salting-out method. The HLA-B exons 1 - 8 of the proband was amplified and the amplified product was cloned using TOPO TA cloning sequencing kit to split the two alleles apart. Both strands of exons 2, 3 and 4 of chosen colonies were sequencing. The PCR-SSP was performed to confirm the mutations detected by sequencing. The sequencing results showed HLA-B alleles of the proband as B*4601 and the novel allele. The sequences of the novel allele have been submitted to GenBank (DQ089628, DQ089629, DQ089630). After HLA blast analysis, the novel allele showed a single nucleotide mismatch with B*400101 in exon 2 at position 272 C-->A, as the results, changing amino acid from Ser to Tyr at codon 67. It is concluded that this allele is a novel one and has been officially named B*4061 by the WHO Nomenclature Committee.
Alleles
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Amino Acid Substitution
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Asian Continental Ancestry Group
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genetics
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Base Sequence
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China
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HLA-B Antigens
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genetics
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immunology
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Histocompatibility Testing
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Humans
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Molecular Sequence Data
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Sequence Analysis, DNA
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Sequence Homology, Nucleic Acid
4.Sequence analysis of a novel HLA-DRB1 allele, DRB1 * 1212.
Fa-ming ZHU ; Wei ZHANG ; Qin-feng LU ; Ji HE ; Wei WANG ; Zhe-dong HAN ; Li-xing YAN
Chinese Journal of Medical Genetics 2006;23(1):47-49
OBJECTIVETo investigate the molecular genetics basis for HLA novel allele HLA-DRB1*1212 in Chinese population.
METHODSGenomic DNA was extracted from whole blood by salting-out method. HLA-DRB1 gene exon 2 was amplified by PCR with group-specific primers from genomic DNA. PCR products were cut back from agarose gels and purified to sequence directly. The polymerase chain reaction-sequence specific oligonucleotide probes (PCR-SSO) was performed to confirm the mutations which were detected by sequencing in this study.
RESULTSThe sequencing results showed HLA-DRB1 alleles of the proband as DRB1*090102 and the novel allele. The sequences of the novel allele have been submitted to GenBank (AY899825). Through BLAST analysis, the novel allele was found to be different from DRB1*120101 at position 199A-->C in exon 2, that results in an amino acid change from Ile to Leu at codon 67.
CONCLUSIONThis allele is a novel and has been officially named as DRB1*1212 by the WHO Nomenclature Committee.
Alleles ; Asian Continental Ancestry Group ; genetics ; Base Sequence ; China ; ethnology ; DNA ; analysis ; Ethnic Groups ; Female ; HLA-DR Antigens ; genetics ; HLA-DRB1 Chains ; Humans ; Male ; Molecular Sequence Data ; Polymerase Chain Reaction ; Sequence Analysis
5.Determination of mosapride in human plasma by high performance liquid chromatography tandem mass spectrometry.
Feng QIN ; Ling-Yun CHEN ; Yuan-Yuan MA ; Dong WANG ; Juan LIU ; Xiu-Mei LU ; Fa-Mei LI
Acta Pharmaceutica Sinica 2007;42(8):882-885
To develop a sensitive and specific high performance liquid chromatography-tandem mass spectrometric (HPLC-MS/MS) method for the determination of mosapride in human plasma, mosapride and internal standard tamsulosin were extracted from plasma with liquid-liquid extraction, then separated on a Waters ACQUITY UPLC BEH C18 column (50 mm x 2.1 mm, 1.7 microm ID) with gradient elution at flow-rate of 0.25 mL x min(-1). The mobile phase was water (containing 0.3% formic acid) and acetonitrile under gradient conditions. Electrospray ionization (ESI) source was applied and operated in the positive ion mode. Multiple reaction monitoring (MRM) mode with the transitions of m/z 422 --> m/z 198 and m/z 409 --> m/z 228 were used to quantify mosapride and the internal standard, respectively. The linear calibration curve was obtained in the concentration range of 0.17 - 68.00 ng x mL(-1). The lower limit of quantification was 0.17 ng x mL(-1). The inter- and intra-day precision (RSD) was less than 13%, and the accuracy (RE) was within +/- 6.3% calculated from QC samples. The method was used to determine the concentration of mosapride in plasma after a single oral dose of 5 mg mosapride citrate to 20 healthy male Chinese volunteers. The method has been proved to be selective, sensitive, rapid and suitable for pharmacokinetic study of mosapride.
Administration, Oral
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Area Under Curve
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Benzamides
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administration & dosage
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blood
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pharmacokinetics
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Chromatography, High Pressure Liquid
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methods
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Gastrointestinal Agents
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administration & dosage
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blood
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pharmacokinetics
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Humans
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Male
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Morpholines
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administration & dosage
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blood
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pharmacokinetics
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Sensitivity and Specificity
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Serotonin Receptor Agonists
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administration & dosage
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blood
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pharmacokinetics
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Spectrometry, Mass, Electrospray Ionization
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Tandem Mass Spectrometry
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methods
6.Role of transient receptor potential melastatin 8 channels in migraine mechanism in rats.
Dong-Mei QIN ; Zhuan ZOU ; Chao-Ran ZHOU ; Fa-Guang MU
Chinese Journal of Contemporary Pediatrics 2015;17(5):515-519
OBJECTIVETo investigate the role of transient receptor potential melastatin 8 (TRPM8) channels in migraine mechanism in rats by measuring the changes in expression of TRPM8 in the trigeminal nerve of rats with migraine.
METHODSTwenty male Sprague-Dawley rats were randomly and equally divided into a blank control group and a model group. Nitroglycerin (10 mg/kg) was injected subcutaneously in the back of the neck once a week for 5 weeks, to prepared a rat model of migraine without aura. Normal saline was injected subcutaneously instead of nitroglycerin in the control group. At 4 hours after the final injection, behavior scoring of all rats was performed, and then the trigeminal nerve ganglions of rats in both groups were collected for measurement of expression of N-methyl-D-aspartate receptor (NMDAR), protein kinase A (PKA), and TRPM8 using immunohistochemical staining, immunofluorescence, and Western blot, respectively.
RESULTSThe behavior score in each week during the rat model preparing was significantly higher in the model group than in the control group (P<0.05). The expression of NMDAR, PKA, and TRPM8 in the model group was significantly higher than in the control group (P<0.01). Both the behavior score and the expression of NMDAR were positively correlated with the expression of TRPM8 (r=0.822 and 0.794 respectively; P<0.01).
CONCLUSIONSTRPM8 may be involved in migraine mechanism probably by activation of the NMDAR pathway.
Animals ; Cyclic AMP-Dependent Protein Kinases ; analysis ; Male ; Migraine Disorders ; etiology ; Rats ; Rats, Sprague-Dawley ; Receptors, N-Methyl-D-Aspartate ; analysis ; physiology ; TRPM Cation Channels ; physiology
7.Development of a Forensic Multiplex Amplification STR Kit for 15 Autosomal STR Loci and 10 Y-STR Loci.
Yan DONG ; Shuang-shuang LIN ; Yu CAO ; Wei-wei WU ; Shu-qin HUANG ; Wei-guo ZHENG ; Fa-yuan LI ; Bin-wen GE ; Yu-lin GUO ; Huai-gu ZHOU
Journal of Forensic Medicine 2015;31(5):373-380
OBJECTIVE:
To establish a multiplex STR genotyping method for autosomal STR and Y-STR loci in forensic biological practice.
METHODS:
Widely used autosomal STR loci and Y-STR loci were selected. A set of PCR primers was designed, and a 5-dye fluorescent labeled STR multiplex PCR reagent kit was developed.
RESULTS:
A kit was developed which can simultaneously detect 15 autosomal STR loci, 10 Y-STR loci, and an Amelogenin.
CONCLUSION
The 15 autosomal STR plus 10 Y-STR kit in combination with capillary electrophoresis method was used to STR genotyping with accurate and reliable results. The new one-step testing kit can potentially be widely used in forensic cases and DNA databank in the future.
Amelogenin
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Chromosomes, Human, Y/genetics*
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DNA Primers
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Databases, Nucleic Acid
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Forensic Genetics/methods*
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Genotype
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Genotyping Techniques/instrumentation*
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Humans
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Indicators and Reagents
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Microsatellite Repeats
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Multiplex Polymerase Chain Reaction
8.Study on postoperative fecal function and quality of life of patients with hirschsprung's disease
Li-Li WANG ; Fa-Wei QIN ; Li-Li DONG
Chinese Journal of Modern Nursing 2011;17(5):520-522
Objective To evaluate postoperative fecal function and quality of life of patients with hirschsprung's disease and to provide objective evidence for improving the quality of life after operations.Methods A follow-up research was made to 113 selected patients who were operated for Hirschsprung's disease. Their records were analyzed retrospectively and the qualities of life of patients were assessed according to the Heikkinen standard quantitative clinical scoring systems. Results 70. 80% of patients (80/113 ) have normal bowel habit after operations and 24.01% of them have abnormal bowel habit in different degree. Among 50 patients after school age, scoring of quality d life is good in 20 patients(40% ), fair in 23(46%) and week in 7( 14% ). A positive correlation was found between fecal function and quality of life. Conclusions The abnormal fecal function and complications after operations influence the quality of life of patients with Hirschsprung's disease to large extent and some positive measures should be taken to improve their quality of life.
9.Field evaluation of alternative testing strategies for the detection of HIV infection in Beijing.
Fa-Xin HEI ; Yan JIANG ; Wei-Dong SUN ; Qi-Yun ZHANG ; Qin ZHANG ; Jing-Rong YE ; Hai-Lin LIU ; Hong-Yan LU ; Xiong HE
Biomedical and Environmental Sciences 2007;20(4):265-268
OBJECTIVETo identify a cost-efficient alternative antibody testing strategy for screening and confirmation of HIV infection by rapid simple tests (RSTs) and enzyme-linked immunosorbent assays (ELISAs).
METHODSFour RSTs (RST1, RST2, RST3, and RST4) and five ELISAs (ELISA1, ELISA2, ELISA3, ELISA4, and ELISA5) were evaluated in two phases by using banked and serum specimens prospectively collected at regional hospitals and voluntary counseling and testing (VCT) centers in Beijing. A total of 200 banked serum specimens were included in the first phase, including 62 HIV-positive, 127 HIV-negative and 11 indeterminate specimens. All specimens were tested by four RSTs and five ELISAs respectively. The second phase involved prospective testing of 389 routine specimens, including 92 HIV-positive, 287 HIV-negative, and 10 indeterminate specimens. All the specimens were tested by two RSTs (RST2 and RST4) and three ELISAs (ELISA1, ELISA3, and ELISA4), which were selected for their respective excellent sensitivity and/or specificity. Western blot (WB) was used as a gold standard for confirming the reactivity of all the specimens.
RESULTSSensitivity, specificity, and efficacy were calculated for each assay in two phases. In the first phase, four assays (ELISA4, RST2, RST3, and RST4) had a specificity of 100%. For the determination of efficacy, ELISA4, RST2, and RST4 were selected in the second phase. ELISA1 and ELISA3 which have a sensitivity of 95.9% and 93.2% respectively also entered this phase. In the second phase, all the five assays (ELISA1, ELISA3, ELISA4, RST2, and RST4) had a sensitivity and specifity of over 90%. ELISA1 had a sensitivity of 99% and ELISA4 a specificity of 99%.
CONCLUSIONThe sensitivity ELISA1 and the specificit of ELISA4 are comparable to ELISA/WB standard strategy. Application of this alternative testing strategy provides a cost-effective method for determining HIV prevalence in Beijing.
Blotting, Western ; methods ; China ; Enzyme-Linked Immunosorbent Assay ; methods ; HIV Infections ; diagnosis ; Humans ; Sensitivity and Specificity
10.Sequence analysis of a novel HLA-A*3308 allele.
Qin-feng LV ; Wei ZHANG ; Ji HE ; Wei WANG ; Zhe-dong HAN ; Fa-ming ZHU ; Li-xing YAN
Chinese Journal of Medical Genetics 2006;23(3):269-271
OBJECTIVETo investigate the molecular genetics basis for HLA novel allele HLA-A*3308 in Chinese population.
METHODSDNA was extracted from whole blood by PEL-FREEZ DNA extraction kit. The amplification of HLA-A exons 1-8 of the proband was preformed by PCR and the amplified product was cloned with TOPO cloning sequencing kit to split the two alleles apart. Both strands of exons 2, 3 and 4 of chosen clones were sequenced. The PCR-SSP was performed to confirm the mutations detected by sequencing.
RESULTSThe sequencing results showed HLA-A alleles of the proband as A*0201 and the novel allele. The sequences of the novel allele have been submitted to GenBank (DQ089631, DQ089632, DQ089633). BLAST analysis showed that the novel allele got the difference from A*3303 by five nucleotides at positions 240 A>T, 256C>G, 259A>G, 261C>G and 270T>A in exon 2. This resulted in three amino acids changes from Arg to Gly at codon 62, Asn to Glu at codon 63 and Asn to Lys at codon 66.
CONCLUSIONThis allele is a novel allele and has been officially named A*3308 by the WHO Nomenclature Committee.
Alleles ; Base Sequence ; HLA-A Antigens ; genetics ; Humans ; Male ; Molecular Sequence Data ; Polymerase Chain Reaction ; Sequence Analysis, DNA