1.Establishment of a One-Step Real-Time RT-PCR Method for the Detection of Venezuelan Equine Encephalitis Virus.
Shasha QIAN ; Biao HE ; Zhongzhong TU ; Huancheng GUO ; Changchun TU
Chinese Journal of Virology 2015;31(2):107-113
Venezuelan equine encephalitis (VEE) is a zoonotic disease caused by the Venezuelan equine encephalitis virus (VEEV) complex. This disease has not yet been reported in China, and it is therefore essential to establish a rapid and accurate method for detection of the virus in order to prevent and control this disease. In this study, a one-step real-time quantitative RT-PCR method was developed for the detection of the VEEV complex. A pair of specific primers and a Taqman probe were designed corresponding to a conserved region of the VEEV gene nspl, allowing the detection of all known strains of different sub- types of the virus. Using RNA synthesized by in vitro transcription as template, the sensitivity of this method was measured at 3.27 x 10(2) copies/microL. No signal was generated in response to RNA from Chikungunya virus (CHIKV), nor to RNA encoding the nsp1 fragment of Eastern equine encephalitis virus (EE-EV) or Western equine encephalitis virus (WEEV), all of which belong to the same genus as VEEV. This indicates that the method has excellent specificity. These results show that this one-step real-time quantitative RT-PCR method may provide an effective tool for the detection of VEEV in China.
China
;
DNA Primers
;
genetics
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Encephalitis Virus, Venezuelan Equine
;
classification
;
genetics
;
isolation & purification
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Encephalomyelitis, Venezuelan Equine
;
virology
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Humans
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RNA, Viral
;
genetics
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Reverse Transcriptase Polymerase Chain Reaction
;
methods
2.Zoonotic encephalitides caused by arboviruses: transmission and epidemiology of alphaviruses and flaviviruses.
Yun Young GO ; Udeni B R BALASURIYA ; Chong Kyo LEE
Clinical and Experimental Vaccine Research 2014;3(1):58-77
In this review, we mainly focus on zoonotic encephalitides caused by arthropod-borne viruses (arboviruses) of the families Flaviviridae (genus Flavivirus) and Togaviridae (genus Alphavirus) that are important in both humans and domestic animals. Specifically, we will focus on alphaviruses (Eastern equine encephalitis virus, Western equine encephalitis virus, Venezuelan equine encephalitis virus) and flaviviruses (Japanese encephalitis virus and West Nile virus). Most of these viruses were originally found in tropical regions such as Africa and South America or in some regions in Asia. However, they have dispersed widely and currently cause diseases around the world. Global warming, increasing urbanization and population size in tropical regions, faster transportation and rapid spread of arthropod vectors contribute in continuous spreading of arboviruses into new geographic areas causing reemerging or resurging diseases. Most of the reemerging arboviruses also have emerged as zoonotic disease agents and created major public health issues and disease epidemics.
Africa
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Alphavirus*
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Animals, Domestic
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Arboviruses*
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Arthropod Vectors
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Asia
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Encephalitis
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Encephalitis Virus, Venezuelan Equine
;
Encephalitis Virus, Western Equine
;
Encephalitis Viruses
;
Encephalomyelitis, Equine
;
Epidemiology*
;
Flaviviridae
;
Flavivirus*
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Global Warming
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Humans
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Population Density
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Public Health
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South America
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Togaviridae
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Transportation
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Urbanization
;
Zoonoses
3.Mass scale screening of common arboviral infections by an affordable, cost effective RT-PCR method.
Debjani TARAPHDAR ; Arindam SARKAR ; Shyamalendu CHATTERJEE
Asian Pacific Journal of Tropical Biomedicine 2012;2(2):97-101
OBJECTIVETo develop a rapid, cost effective RT-PCR method for the mass scale diagnosis of such diseases at the viremia stage to find out the actual disease burden in that area.
METHODSFor this purpose, cases with the history of only short febrile illness were considered. Thus 157 samples with the history of dengue/chikungunya like illness and only 58 samples with a history of acute encephalitis syndrome (AES) were selected.
RESULTSOut of 157 samples, 42 and 74 were detected as dengue and chikungunya, respectively and out of 58 AES cases only 23 could be detected as Japanese encephalitis by this RT-PCR method.
CONCLUSIONSThis cost effective RT-PCR method can detect the total positive cases that remain undetected by ELISA method. Moreover, this method is capable to detect the viral RNA from patients' sera even after the appearance of IgM antibody at one fifth costs as compared with the other commercially available kits.
Antibodies, Viral ; blood ; Arbovirus Infections ; diagnosis ; virology ; Arboviruses ; genetics ; Chikungunya Fever ; diagnosis ; virology ; Dengue ; diagnosis ; virology ; Encephalitis Virus, Japanese ; genetics ; Encephalitis, Japanese ; diagnosis ; virology ; Fever ; diagnosis ; virology ; Humans ; Immunoglobulin M ; blood ; Mass Screening ; RNA, Viral ; blood ; Reverse Transcriptase Polymerase Chain Reaction ; economics ; methods ; Sensitivity and Specificity ; Viremia ; diagnosis ; virology
5.In vivo Study on the Japanese Encephalitis: Viral Localization and Histopathology in the Mouse Brain.
In Beom KIM ; Soo Lim CHAE ; Woo Young CHOI ; Chan PARK ; Young Ran JOO ; Hae Wol CHO ; Keun Yong PARK
Korean Journal of Anatomy 2003;36(5):427-433
Japanese encephalitis is a potentially lethal disease of the central nervous system caused by infection with Japanese encephalitis virus (JEV). JEV is the most common cause of encephalitis over a large part of eastern Asia. To establish and characterize in vivo model to study the Japanese encephalitis, the immunohistochemical localization of JEV and the histopathological finding were investigated in the brains of young adult mice infected with JEV by intraperitoneal inoculation. JEV was localized to neurons in discrete regions of the brain. Histopathological finding showed typical pattern of acute viral encephalitis, such as inflammatory cell infiltration in brain parenchyme and perivascular cuffs of mononuclear cells. These results suggest that this in vivo system can be used to study the mechanism of virus entry into the brain, cell specific tropism, and pathophysiology in Japanese encephalitis.
Animals
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Asian Continental Ancestry Group*
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Brain*
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Central Nervous System
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Encephalitis
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Encephalitis Virus, Japanese
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Encephalitis, Japanese*
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Encephalitis, Viral
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Far East
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Humans
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Immunohistochemistry
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Mice*
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Neurons
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Tropism
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Virus Internalization
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Young Adult
6.Japanese Encephalitis in Korea, 2010: Case Reports and Epidemiology.
Min Ju YEO ; Kyung Ho CHOI ; Suk Hun KANG ; Sung Hun KIM ; Seo Young LEE ; Moo Hyeon SONG ; Seung Hwan LEE
Journal of the Korean Neurological Association 2011;29(4):335-338
Japanese encephalitis has been the leading cause of epidemic viral encephalitis in Korea. In 2010, 26 patients with Japanese encephalitis were documented in Korea. Patients older than 50 years accounted for 54% of this cohort, and none of the patients was younger than 10 years. The number of documented cases of Japanese encephalitis increased markedly in 2010 compared to the annual reported cases during the previous 10 years.
Asian Continental Ancestry Group
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Cohort Studies
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Encephalitis, Japanese
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Encephalitis, Viral
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Humans
;
Korea
7.A connection number-based principal factor analysis forecast method to forecast the encephalitis B epidemics.
Xiu-yang LI ; Kun CHEN ; Ke-qin ZHAO
Chinese Journal of Epidemiology 2005;26(3):218-220
OBJECTIVETo detect the relations between incidence rate of the epidemical encephalitis B and related factors, to provide a simple, valid and practical new method for forecasting encephalitis B eipdemics.
METHODSConnection number between the incidence rate of encephalitis B and the historical forecast factors was computed, before ranking the first, second and the third principal factor, to remove the factor with the smallest value in the light of the connection number before comparing the newest value of forecast factors with the same kind of history while the most nearly value becoming the forecasting factor value and to establish a forecasting equation according to the factor value and the consistent degree of the incidence rate of encephalitis B at that time. Finally, to put into the new factor value to get this forecast value under this equation. Assuming that there are n' (n' >or= 2) forecast factors, this time forecast value can then be directly obtained from the average of these estimate values.
RESULTSUsing above forecast method to forecast the incidence rate of encephalitis B at certain place and year, the predicting value is very much close to the actual incidence rate. Difference between the predicting value forecasted by the above-mentioned method and the actual incidence rate is only 0.0264/100 000 with an accurate rate of 97.94%.
CONCLUSIONThis principal factor analysis forecast method based on connection number in forecasting the incidence rate of encephalitis B prevention is acceptable.
China ; epidemiology ; Encephalitis Virus, Japanese ; Encephalitis, Viral ; epidemiology ; virology ; Factor Analysis, Statistical ; Forecasting ; Humans ; Incidence
8.Neutralizing Antibody Induction and Cytotoxic T Lymphocyte Response to Nakayama-NIH and Beijing-1 as Japanese Encephalitis Virus Vaccine Strains.
Young Joo CHO ; Soo Young JUNG ; Yeun Jung KIM ; Dae Sun KIM ; Young Bong KIM ; Young Ran JOO ; Young Weo JUNG ; Sook Jin HUR ; Jae Hwan NAM
Journal of Bacteriology and Virology 2007;37(3):161-167
The Japanese encephalitis virus (JEV), a member of the Flaviviridae family and Flavivirus genus, is transmitted by mosquitoes. JEV, of which some 35,000 cases are recorded every year, is a positive RNA virus. Two types of JEV vaccines have been developed to prevent the onset of encephalitis in humans, namely formalin-inactivated and liveattenuated vaccines. JEV inactivated vaccines are usually made using the Nakayama-NIH or Beijing-1 strains of the JEV virus. In this study, the immunological response to the Nakayama-NIH and Beijing-1 strains was analyzed as part of the effort to compile basic data which could lead to the selection of a suitable vaccine strain. To this end, the virus titer of Beijing-1 was found to be two-fold higher than that of Nakayama-NIH by plaque assay. Moreover, Beijing-1-induced neutralizing antibodies showed a higher level of titers when confronted by Korean JEV isolates than Nakayama-NIH-induced neutralizing antibodies (1:320 vs. 1:160, respectively). However, as a minimum ratio of 1:10 neutralizing antibody titers are required to protect against JEV infection, both strains in effect exhibited a sufficient level of neutralizing antibody titers. What's more, Beijing-1 was found to induce a somewhat higher cytotoxic T lymphocyte (CTL) response than Nakayama-NIH. Taken together, this can be taken to mean that Beijing-1 may in fact be a more effective vaccine candidate strain when it comes to inducing a high level of protective immunity against JEV infection.
Antibodies, Neutralizing*
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Asian Continental Ancestry Group*
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Culicidae
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Encephalitis
;
Encephalitis Virus, Japanese*
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Encephalitis, Japanese*
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Flaviviridae
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Flavivirus
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Humans
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Lymphocytes*
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RNA Viruses
;
Vaccines
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Vaccines, Inactivated
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Viral Load
9.Serological and molecular epidemiology of Japanese encephalitis virus infections in swine herds in China, 2006–2012
Chunxia CHAI ; Qiao WANG ; Sanjie CAO ; Qin ZHAO ; Yiping WEN ; Xiaobo HUANG ; Xintian WEN ; Qiguai YAN ; Xiaoping MA ; Rui WU
Journal of Veterinary Science 2018;19(1):151-155
Japanese encephalitis virus (JEV) is a mosquito-borne, zoonotic flavivirus causing viral encephalitis in humans and reproductive disorder in swine. JEV is prevalent throughout China in human; however, spatiotemporal analysis of JEV in Chinese swine herds has not been reported previously. Herein, we present serological and molecular epidemiological results and estimates of prevalence of JEV infections among swine herds in various regions of China. The results suggest that JEV infections are widespread and genotype I and III strains co-exist in the same regions. Therefore, there is an urgent need to monitor JEV infection status among swine herds in China.
Asian Continental Ancestry Group
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China
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Encephalitis Virus, Japanese
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Encephalitis, Japanese
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Encephalitis, Viral
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Flavivirus
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Genotype
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Humans
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Molecular Epidemiology
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Prevalence
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Spatio-Temporal Analysis
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Swine
10.Roles of N-glycosylation in immunity of prME and NS1 gene of JEV.
Zi-Zhong ZHANG ; Xue WANG ; Jun-Jie ZAI ; Le-Qiang SUN ; Yun-Feng SONG ; Huan-Chun CHEN
Chinese Journal of Virology 2012;28(3):213-218
PrME and NS1 gene were the two main immuneprotect proteins of Japanese encephalitis virus (JEV), and they were also N-linked glycosylation proteins. To clear the effect of N-glycosylation on JEV immunity, the N-glycosylation site of prME and NS1 gene were eliminated by site-directed mutant PCR, subtituting the N to Q. And the the mutant genes were subcloned into eukaryotic expression plasmid. Four-weeks female mice were immuned with the wildtype and mutant gene by twice. The antibodies against prME were detected by ELISA and the neutralization antibodies were tested by viral neutralizing assay. The immunoprotection were determined by attack with JEV virulent strain. Compare with the wild-type gene immuned-groups, one N-glycan eliminated prME gene could induce a little higher ELISA antibody, neutralization antibody and immunoprotection, but the immunity of gene with both N-glycan absence was decreased. The similar status were observed in the wildtype and mutant NS1 groups. Thus these results show that the N-linked glycosylation in the prME and NS1 gene were correlated with the immunity, one glycan absent would enhance the immunity but both two loss would impair it.
Animals
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Antibodies, Viral
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immunology
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Encephalitis Virus, Japanese
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genetics
;
immunology
;
metabolism
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Encephalitis, Japanese
;
immunology
;
virology
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Female
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Glycosylation
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Humans
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Mice
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Mice, Inbred BALB C
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Viral Nonstructural Proteins
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genetics
;
immunology
;
metabolism