1.Shigella flexneri bacteremia: A case report.
Kyoung Sook KIM ; Yunsop CHONG ; Samuel Y LEE ; Kir Young KIM
Yonsei Medical Journal 1981;22(1):21-25
Shigella bacteremia occurs so rarely that blood culture is useless for the laboratory diagnosis of dysentery. S flexneri type 2 was isolated from a blood culture of a 3-year-old boy with clinical diagnosis of dysentery. A stool culture was negative for not only shigella but also other pathogenic bacteria. This was the only shigella-positive blood culture during the last 12 1/2 years although more than 1,200 cases of bacteriologically proven dysentery were encountered. One of the 4 bottles inoculated with 2 blood samples drawn on the 4th day of illness yielded numerous shigella and few Klebsiella pneumoniae colonies on subculture. On admission the patient was a moderately nourished boy with body temperature of 38 degrees C. The leukocyte count was 10,200/microliter with 29% neutrophils. No evidence of septicemia was noted. He was placed on antibiotics and fluid replacement. The patient was discharged in 6 days after full recovery.
Child, Preschool
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Dysentery, Bacillary/microbiology*
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Human
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Male
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Septicemia/microbiology*
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Shigella flexneri/isolation & purification*
3.Pathogenic detection and molecular tracing of a bacillary dysentery outbreak by Shigella sonnei in Huainan city.
Jiang LIU ; Yong SUN ; Jie ZHANG ; Fan Rong ZENG ; Xiao Bo WANG ; Li Jie ZHU ; Meng Yang SUN ; Shou Jie YU
Chinese Journal of Preventive Medicine 2022;56(4):437-442
Objective: To understand the virulence gene and drug resistance profile of Shigella sonnei outbreak in Huainan city, and conduct pathogenic traceability analysis. Methods: Water samples and feces related to an infectious diarrhea outbreak in Huainan city in August 2020 were collected for multiple pathogen detection. Virulence gene, drug sensitivity, pulse-field gel electrophoresis and whole genome sequencing of Shigella isolates were analyzed respectively. Results: 38 strains of Shigella sonnei were detected in 56 samples of mucilage feces with a positive rate 67.86%, and all serotypes were Shigella sonnei Phase I. Three strains of Shigella sonnei were detected by fluorescence PCR in the Gram-negative (GN) bacterial enrichment solution of terminal water and well water. Virulence genes were ipaH positive (38), ipaH/ial (31) and ipaH/ial/sen positive (1), respectively. The drug resistance spectrum showed that 9 of 14 antibiotics were 100% resistant, and only imipenem, chloramphenicol, ceftazidime and ciprofloxacin were effective drugs. XbaⅠ restriction enzyme map type of 36 isolates was completely consistent, and the ST type analysis of 3 strains was ST152. Whole genome sequencing and analysis verified that the outbreak was caused by a single clonal group of strains, and revealed that the isolates of the outbreak were clustered into a large cluster with 3 Chinese strains and 1 Korean strain in the database, far away from the strains of other countries. Conclusion: The outbreak is caused by a single clone of Shigella sonnei, which are low virulence strains and have multiple drug resistance.
Disease Outbreaks
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Dysentery, Bacillary/microbiology*
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Humans
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Shigella
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Shigella sonnei/genetics*
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Water/pharmacology*
5.Molecular typing of isolates from two dysentery outbreaks in Chengdu, through pulsed field gel electrophoresis technology.
Yan-Fang MIAO ; Wei HUANG ; Jian-Ping HUANG ; Zhen-Jun LI ; Dong JIN ; Zhi-Gang CUI ; Ai-Lan ZHAO ; Na LIANG ; Yan BAI
Chinese Journal of Epidemiology 2008;29(3):282-285
OBJECTIVEUsing pulsed field gel electrophoresis (PFGE) and polymerase chain reaction (PCR) typing to analyze strains isolated from two outbreaks caused by Shigella sonnei and to trace the source of infection.
METHODSVirulence genes ipaH and ial were detected by PCR and PFGE was used to subtype the isolates. Patterns were compared, using the software BioNumerics.
RESULTSWithin the 54 isolates, all were ipaH positive with 48 as ial positive. Strains from the Chongzhou outbreak were clustered into 4 PFGE patterns, with the predominant pattern accounted for 72% of the analyzed strains. The pattern of strains isolated from the cold pork with sauce was identical to the predominant pattern. The strains from Dayi outbreak were clustered into 8 PFGE patterns and the predominant pattern accounted for 56% of the test strains.
CONCLUSIONStrains from the two outbreaks were quite different and the 'cold pork with sauce' seemed to be the major source of infection, causing the outbreak of diarrhea in Chongzhou. The sources of infection of the Dayi outbreak might be complicated whereas PFGE showed a discriminatory and reproducible laboratory tool in the epidemiologic investigation on outbreaks of diarrhea.
Bacteriophage Typing ; China ; epidemiology ; Disease Outbreaks ; Dysentery, Bacillary ; epidemiology ; microbiology ; Electrophoresis, Gel, Pulsed-Field ; Food Microbiology ; Foodborne Diseases ; epidemiology ; microbiology ; Humans ; Shigella ; classification ; isolation & purification
7.Analysis of etiological surveillance results of Shigella spp between 2009 and 2010 in Henan province.
Yu-jiao MU ; Jia-yong ZHAO ; Qi LUO ; Li-li HUANG ; Sheng-li XIA
Chinese Journal of Preventive Medicine 2012;46(4):334-337
OBJECTIVETo explore the etiologic characteristics of bacillary dysentery found in Henan province, between year 2009 and 2010.
METHODSIn order to explore the distribution of bacterial types, drug susceptibility and the virulence gene carrier situation, 482 strains of Shigella isolated in Henan province between 2009 and 2010 were pathogen-detected and analyzed by serotype screening, anti microbial sensitivity test and PCR methods.
RESULTSThe 482 isolated strains were confirmed to be Shigella by both morphological and biochemical tests. The Shigella strains were divided into 13 serotypes in 2 groups, namely Shigella flexneri (B group) accounting for 72.0% (347/482) and Shigella sonnei (D group), accounting for 28.0% (135/482). The detection rate of Serotype F2a, as the dominant type of Shigella flexneri, decreased from 43.4% (106/245) in 2009 to 33.8% (80/237) in 2010; while the detection rate of Shigella sonnei increased from 13.1% (32/245) to 43.5% (103/237) in the same period. The results of microbial sensitivity tests carried out in year 2009 and 2010, both showed that over 98% of the 185 studied strains were resistant to ampicillin (AMP), trimethoprim-pyrimidine (TMP), tetracycline (TE), streptomycin (S) and nalidixic acid (NA).182 strains were recruited in the virulence factors detection, 67.6% (123/182) of which carried Shigella Enterotoxin 1B (set1B), Shigella Enterotoxin 2 (set2), invasive plasmid antigen H (ipaH) or invasion-related virulence factors (ial) and 24.2% (44/182) of which carried 3 virulence factors mentioned above.
CONCLUSIONThe prevalent serotypes of Shigella in Henan province have changed in recent years. The isolated strains showed high resistance to common antibacterial drugs and generally carried virulence factors.
China ; epidemiology ; Dysentery, Bacillary ; epidemiology ; microbiology ; prevention & control ; Female ; Humans ; Male ; Microbial Sensitivity Tests ; Population Surveillance ; Prevalence ; Serotyping ; Shiga Toxins ; genetics ; Shigella ; genetics ; isolation & purification
8.The 23S rRNA gene PCR-RFLP used for characterization of porcine intestinal spirochete isolates.
Journal of Veterinary Science 2006;7(3):277-280
Using three reference strains of Brachyspira hyodysenteriae (B204, B234, B169), one B. pilosicoli (P43/6/78), one B. murdochii (56-150), one B. intermedia (PWS/A), one B. innocens (B256) and ten Korean isolates, PCR-RFLP analysis of DNA encoding 23S rRNA was performed to establish a rapid and accurate method for characterizing porcine intestinal spirochetes. Consequently, B. hyodysenteriae and B. pilosicoli revealed different restriction patterns; however, the other three species shared the same pattern. These findings are not consistent with a prior report. Differences in 23S rRNA gene sequences, between two B. murdochii strains, 56-150 and 155-20, were observed. These results indicate that 23S rRNA PCR-RFLP could be used as an identification method for pathogenic Brachyspira spp. (B. hyodysenteriae and B. pilosicoli) as well as an epidemiological tool for characterizing spirochetes isolated from swine.
Animals
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DNA, Bacterial/genetics
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Dysentery, Bacillary/diagnosis/microbiology/*veterinary
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Korea
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Phylogeny
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Polymerase Chain Reaction/methods/*veterinary
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Polymorphism, Restriction Fragment Length
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RNA, Ribosomal, 23S/chemistry/*genetics
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Spirochaetales/*genetics/*isolation&purification
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Spirochaetales Infections/diagnosis/microbiology/*veterinary
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Swine
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Swine Diseases/diagnosis/*microbiology
9.Detection of class I integron and its relation to antimicrobial resistance of Shigella flexneri in children.
Hui YU ; Xiao-hong WANG ; Ying-zi YE ; Jian-chang XUE ; Qi-rong ZHU
Chinese Journal of Pediatrics 2006;44(9):680-683
OBJECTIVETo investigate class I integron of Shigella flexneri, its prevalence in children, and its relation to bacterial resistance to antimicrobial agents.
METHODSTotally 51 strains of Shigella flexneri were isolated from fecal samples of children suffering from bacterial diarrhea seen between June 2004 and November 2004 at Children's Hospital of Fudan University. Polymerase chain reaction (PCR) was employed to amplify various integron markers, including intI1, gene cassette region and 3' conserved region of class I intrgron; susceptibility of Shigella flexneri strains to 7 antimicrobial agents was determined by K-B (Kriby-Bauer) method.
RESULTSForty-six strains of Shigella flexneri had intI gene with a positive rate of 90.2% (46/51); 24 strains of Shigella flexneri were positive for qacEDelta1-sul1, the positive rate was 47.1% (24/51); proportion of the isolates positive for all the three regions of class I integron was 43.1% (22/51); 46 strains of intI positive Shigella flexneri were all positive for ant (3'')-I. Among 46 strains of intI positive isolates, proportions of the isolates positive and negative for qacEDelta1-sul1 were 47.8% (22/46) and 52.2% (24/46), respectively. In the class I integron positive Shigella flexneri, the resistance rates of ampicillin (chi(2) = 10.13, P < 0.01) and chloramphenicol (chi(2) = 19.97, P < 0.01) were significantly higher than those in the class I integron-negative group.
CONCLUSIONSClass I integron was detected in 90.2% of Shigella flexneri in children; carriage of class I integron is related to antimicrobial resistance of Shigella flexneri.
Anti-Bacterial Agents ; pharmacology ; Child ; DNA, Bacterial ; genetics ; Diarrhea ; microbiology ; Drug Resistance, Bacterial ; genetics ; Dysentery, Bacillary ; drug therapy ; microbiology ; Feces ; microbiology ; Humans ; Integrons ; drug effects ; genetics ; Polymerase Chain Reaction ; Retrospective Studies ; Shigella flexneri ; drug effects ; genetics ; isolation & purification
10.Quinolone-resistant Shigella flexneri Isolated in a Patient Who Travelled to India.
You La JEON ; You Sun NAM ; Gayoung LIM ; Sun Young CHO ; Yun Tae KIM ; Ji Hyun JANG ; Junyoung KIM ; Misun PARK ; Hee Joo LEE
Annals of Laboratory Medicine 2012;32(5):366-369
We report a recent case in which ciprofloxacin-resistant Shigella flexneri was isolated from a 23-yr-old female patient with a history of travel to India. Prior to her admission to our internal medicine department, she experienced symptoms of high fever and generalized weakness from continuous watery diarrhea that developed midway during the trip. S. flexneri was isolated from the stool culture. Despite initial treatment with ciprofloxacin, the stool cultures continued to show S. flexneri growth. In the susceptibility test for antibiotics of the quinolone family, the isolate showed resistance to ciprofloxacin (minimum inhibitory concentration [MIC], 8 microg/mL), norfloxacin (MIC, 32 microg/mL), ofloxacin (MIC, 8 microg/mL), nalidixic acid (MIC, 256 microg/mL), and intermediate resistance to levofloxacin (MIC, 4 microg/mL). In molecular studies for quinolone resistance related genes, plasmid borne-quinolone resistance genes such as qnrA, qnrB, qnrS, aac(6')-Ib-cr, qepA, and oqxAB were not detected. Two mutations were observed in gyrA (248C-->T, 259G-->A) and 1 mutation in parC (239G-->T). The molecular characteristics of the isolated S. flexneri showed that the isolate was more similar to the strains isolated from the dysentery outbreak in India than those isolated from Korea.
Anti-Bacterial Agents/pharmacology
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Bacterial Proteins/genetics/metabolism
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Drug Resistance, Bacterial/drug effects
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Dysentery, Bacillary/microbiology
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Feces/microbiology
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Female
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Humans
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India
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Mutation
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Quinolones/*pharmacology
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Shigella flexneri/drug effects/*isolation & purification/metabolism
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Travel
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Young Adult