2.Diagnostic Value of Flow Cytometric DNA Analysis in the Evaluation of Effusions.
Korean Journal of Cytopathology 1997;8(1):20-26
The specificity of cytologic examination in effusions is high but the sensitivity is low. Therefore, various ancillary methods for the detection of malignant cells in effusions have been proposed. The presence of an aneuploid cell population is generally considered diagnostic of malignancy. The purpose of this study is to determine whether the routine use of flow cytometry adds to standard cytologic evaluation in effusions. We did flow cytometric DNA analysis in 76 effusions(28 malignant and 48 benign fluids). All the 48 benign effusions were diploid. There were 12(42.9%) aneuploid and 16(67.1%) diploid malignant effusions. Based on these results flow cytometric DNA analysis had a sensitivity of 42.9% and a specificity of 100%. These results suggest that flow cytometric DNA analysis may be a useful adjunct to conventional cytology, but its principal limitation is its relatively low sensitivity.
Aneuploidy
;
Diploidy
;
DNA*
;
Flow Cytometry
;
Sensitivity and Specificity
3.Role of Chromosome Changes in Crocodylus Evolution and Diversity.
Kornsorn SRIKULNATH ; Watcharaporn THAPANA ; Narongrit MUANGMAI
Genomics & Informatics 2015;13(4):102-111
The karyotypes of most species of crocodilians were studied using conventional and molecular cytogenetics. These provided an important contribution of chromosomal rearrangements for the evolutionary processes of Crocodylia and Sauropsida (birds and reptiles). The karyotypic features of crocodilians contain small diploid chromosome numbers (30~42), with little interspecific variation of the chromosome arm number (fundamental number) among crocodiles (56~60). This suggested that centric fusion and/or fission events occurred in the lineage, leading to crocodilian evolution and diversity. The chromosome numbers of Alligator, Caiman, Melanosuchus, Paleosuchus, Gavialis, Tomistoma, Mecistops, and Osteolaemus were stable within each genus, whereas those of Crocodylus (crocodylians) varied within the taxa. This agreed with molecular phylogeny that suggested a highly recent radiation of Crocodylus species. Karyotype analysis also suggests the direction of molecular phylogenetic placement among Crocodylus species and their migration from the Indo-Pacific to Africa and The New World. Crocodylus species originated from an ancestor in the Indo-Pacific around 9~16 million years ago (MYA) in the mid-Miocene, with a rapid radiation and dispersion into Africa 8~12 MYA. This was followed by a trans-Atlantic dispersion to the New World between 4~8 MYA in the Pliocene. The chromosomes provided a better understanding of crocodilian evolution and diversity, which will be useful for further study of the genome evolution in Crocodylia.
Africa
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Alligators and Crocodiles
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Arm
;
Cytogenetics
;
Diploidy
;
Genome
;
Karyotype
;
Mya
;
Phylogeny
4.Flow Cytometric Analysis of DNA in Meningiomas.
Yong Gu CHONG ; Heung Sob CHONG ; Ki Chan LEE ; Jeong Wha CHU ; Yang Sok CHAE
Journal of Korean Neurosurgical Society 1991;20(4):199-207
The Flow cytometric analysis of DNA in tumors have been reported to reflect the cellular activities and proliferative rates. Currently, it has been used to predict the prognosis and responsiveness of tumors to various modality of therapy. The author analyzed thirty seven meningiomas(7 syncytial, 9 transitional, 6 fibroblastic, 9 angioblastic, 6 atypical) using paraffinembeddede tissues. The ploidy pattern and relative value(%) in the GO/GI, S, and G2/M phases were calculated for each specimen. In our series, All were diploid types except 6 meningiomas(2 syncytial, 2 angioblastic, 2 atypical). Diploidy with weak tetraploidy(upto 10%) was found in 8 cases(40% of atypical, 33% of fibrobiastic and transitional) but not in syncytial meningioma. Diploidy with strong teraploigy(10-25%) was found in 1 transitional, 1 angioblastic meningioma. There was wide variation in 4C values even in the same subgroups of meningiomas. The distribution of P. I values is even and lower especially in fibroblastic meningiomas. On the contrary, the distribution of P. I values is relatively uneven and highly variable in other types of meningiomas & even in the same subgroups of meningiomas except fibroblastic meningioma. The prediction of recurrences in operated cases remained further investigation due to lack of long-term follow-up.
Diploidy
;
DNA*
;
Fibroblasts
;
Flow Cytometry
;
Meningioma*
;
Ploidies
;
Prognosis
;
Recurrence
5.Prognostic significance of DNA ploidy in carcinoma of prostate: relationship between DNA ploidy, granular differentiation, and stage.
Kyu Seung LEE ; Sung Won LEE ; Sang Eun LEE ; Si Whang KIM
Korean Journal of Urology 1991;32(6):907-914
Flow cytometry was used to measure the DNA content in archived paraffin-embedded human prostatic cancer tissue for 93 patients with known outcomes that presented between 1980 and 1988 Of these. 25 patients had clinically localized lesions, while 68 patients presented with advanced diseases. Fifty seven tumors (61%) contained a aneuploid stem line. The Frequency of aneuploid in creased with advancing stage and most tumors confined to the prostate gland were diploid. The degree of glandular differentiation was characterized by the Gleason sum. One-third of tumors with a Gleason sum of 2 to 4 were aneuploid. whereas 78% of tumors with a Gleason sum of 8 to 10 were aneuploid. Among aneuploid tumors. 11% were localized carcinomas. 89% were advanced status. When tumors were classified according to both DNA ploidy and degree of glandular differentiation. the subgroups of tumors with the highest and lowest degree of malignant potential became apparent. Only 27% of diploid tumors with Gleason sum of 2 to 4 were advanced tumors. but 100% of aneuploid tumors with Gleason sum of 8 to 10 were advanced tumors. The influence of DNA ploidy on survival was examined with Kaplan-Meier method and the generalized Wilcoxon test. Overall, patients with diploid tumors had a survival advantage over patients with aneuploid tumors(p<0.05) However. when adjusted for stage, glandular differentiation, the difference in survival curves for aneuploid and diploid was not significant(p>0.05). But, in patients of Stage D with intermediate grade tumors, the survival difference between diploid and aneuploid tumors were obvious. In conclusion, flow cytometry can be expected to become a valuable adjunct to clinical staging and morphologic grading (Gleason sum) in the assessment of the malignant potentials of prostatic cancer.
Aneuploidy
;
Diploidy
;
DNA*
;
Flow Cytometry
;
Humans
;
Ploidies*
;
Prostate*
;
Prostatic Neoplasms
6.Prognostic Significance of DNA Content and S-Phase Fraction in Gastric Carcinomas.
Sukyung HWANG ; Junho LEE ; Sunghoon NOH ; Kangyoung LEE ; Seungho CHOI ; Jinsik MIN
Journal of the Korean Surgical Society 2000;59(5):602-608
PURPOSE: DNA flow cytometry is a simple and easy method to assess the DNA content and the cell-cycle distribution of a tumor cell. The prognostic significance of the DNA content and the S-phase fraction in a gastric carcinoma has been controversial. The purpose of this study was to evaluate the prognostic significance of the nuclear DNA content and the S-phase fraction in patients with a gastric carcinoma. METHODS: Between May 1995 and March 1996, 94 patients who were underwent a gastric resection for a gastric carcinoma were evaluated with DNA flow cytometry. Of them, 88 patients underwent a gastric resection with curative intent. The relationship of variable clinicopathological factors and of recurrence pattern to survival and nuclear DNA content were assessed. RESULTS: The mean age was 55 years. 55 patients (58.5%) exbitied diploidy and 39 patients (41.5%) aneuploidy. There was no relationship between the clinicopathological factors and either the ploidy pattern or the S-phase fraction. Though the recurrence and its pattern were not different between the two ploidy group (p=0.860, 0.137), diploidy tended to recur locoregionally and aneuploidy hematogenously. CONCLUSION: The ploidy pattern was a significant prognostic factor in gastric carcinomas, but should be interpreted carefully.
Aneuploidy
;
Diploidy
;
DNA*
;
Flow Cytometry
;
Humans
;
Ploidies
;
Prognosis
;
Recurrence
7.Flow cytometric DNA ploidy analysis in prostatic adenocarcinoma: a comparison with clinical stage, histopathological grade and prognostic significance.
Jun CHEON ; Yang Seok CHAE ; Jae Heung CHO
Korean Journal of Urology 1992;33(3):436-442
Recent studies suggest the flow cytometric DNA ploidy analysis may be useful in defining the biologic behavior and prognosis in prostatic adenocarcinoma. Flow cytometric nuclear DNA ploidy analysis was used to study the relationship between DNA ploidy, clinical stage and histopathological grade in thirty two patients with prostatic adenocarcinomas diagnosed from 1987 to 1990. The incidence of aneuploidy in the total population was 18 of 32 (56.3%). The frequency of aneuploidy increased with advancing stage and 63.2% of carcinomas with distant metastases were aneuploidy. Aneuploidy was more frequent in high Gleason sum carcinomas than in low. The incidence of aneuploidy in carcinomas with high Gleason grade (Gleason sum 8 to 10) was 77.8%. comparing to 33.3% in low Gleason grade (Gleason sum 2 to 4). When carcinomas classified according to both DNA ploidy and degree of glandular differentiation, then subgroups with the highest and lowest degree of malignant potential became apparent. None of diploid tumors with low Gleason grade (Gleason sum 2 to 4) formed metastasis, but 71.4% of aneuploidy tumors with high Gleason grade (Gleason sum 8 to 10) formed metastases. The influence of DNA ploidy on survival was examined with Kaplan-Meier method and the generalized Wilcoxon test. Overall, the patients with diploid tumor had a survival advantage over patients with aneuploid tumor (p<0.05). In patients with stage C and D, there was increasing tendency of survival in diploid group. In conclusion flow cytometric determination of DNA ploidy in prostatic adenocarcinoma is correlated strongly with clinical stage and Gleason sum and can be expected to be a valuable adjunct b clinical stage and histopathological grade in the assessment of malignant potential of prostatic adenocarcinoma.
Adenocarcinoma*
;
Aneuploidy
;
Diploidy
;
DNA*
;
Humans
;
Incidence
;
Neoplasm Metastasis
;
Ploidies*
;
Prognosis
8.A DNA Ploidy Study Using Image Analysis in melanocytic Skin Lesions.
Gil Ju YI ; Dong Jun KIM ; Chil Hwan OH
Korean Journal of Dermatology 1997;35(6):1059-1065
BACKGROUND: In the cutaneou; neoplasms, especially melanocytic skin lesions, the degree of the nuclear atypia such as the hyp rchromatism, pleomorphism, and giantism is a very impor tant factor when determining the differntial diagnosis between the malignant. and the benign turnors and the prognosis. OBJECTIVE: So we measured and cornpared the nuclear atypia of the malignant melanoma, and acquired and congenital melanocytic nevi(AMN and CMN) using the computerized image analysis (IA). METHODS: Five micron sections were cut from each paraffin block. The sections were Feulgen-stained and image analysis was perforrned with an AIC image analysis system. In each case, 50 lymphocytes nuclei fnim the sarne specimen slide were measured as an internal diploid control. Each 100 cells of the MM, CMN and AMN were measured and are referred to in this report as the upper part and the lower part. The morphological parameters such as mean nuclear area, coefficient of variation(CV) of the nuclear area, roundness of the nucleus and CV of the roundness were measured. For the nuclear content, mean ploidy, CV of the mean ploidy ind 2c Deviation Index(2cI3I) were calculated and then the DNA histograms were produced. RESULTS: Nuclear area, CV of the nuclear area, mean ploidy, CV of the mean ploidy and 2cDI were found to be significantly reat.er for rnalignant melanoma than for CMN and AMN. The nuclear area of AMN is significantly lar ger than that of CMN and there were no significant differences between the uper and the lower parts of three melanocytic lesions in any of the measured parameters. CONCLUSION: The results of o ir study suggest that the IA of the melanocytic cells might reflect the biologic behavior rnore sensitively than do clinical or histologic criteria, therefore important information for differentiating thi benign and the malignant melanocytic lesions may be obtained by the DNA profile and morphomi try on Feulgen stained tissue specirnens using IA.
Diagnosis
;
Diploidy
;
DNA*
;
Lymphocytes
;
Melanoma
;
Paraffin
;
Ploidies*
;
Prognosis
;
Skin*
9.Karyotype analysis and its systematic implications of Pterocypsela formosana and P. elata.
Daigui ZHANG ; Xiaoqi XIANG ; Jieying ZHU ; Gongxi CHEN ; Tao DENG ; Yongxin CHEN
China Journal of Chinese Materia Medica 2012;37(11):1527-1531
Pterocypsela is a very important traditional Chinese medicine from the tribe Cichorieae of Asteraceae. Mitotic chromosome numbers and karyotypes are reported for P. formosana and P. elata from Hunan and Hubei province, China. The former is new and the latter provide confirmation of previous reference. All P. taxa are diploidy with 2n = 18 and their basic number is tentatively suggested as x = 9. Karyotype of Pterocypsela is 2A and P. formosana with a karyotype formula of 2n = 2x = 18 = 4m + 14sm, and 2n = 2x = 18 = 2m + 8sm +8st for P. elata. It is the first time to report the AI value for Pterocypsela in this paper. Cytological data of chromosomal numbers and karyotypes were used to discuss the close relationships of the Pterocypsela genus and the taxonomy of the medicinal plants.
Asteraceae
;
classification
;
cytology
;
genetics
;
Chromosomes, Plant
;
genetics
;
Diploidy
;
Karyotyping
10.Chromosome characteristics of three Coptis species.
Gang XIANG ; Tihua FU ; Qiaojia FAN
China Journal of Chinese Materia Medica 2010;35(11):1367-1371
In the present paper, three Coptis species, collected from Sichuan and Chongqing, China, were used for karyotypic analyses. The results indicated that both C. chinensis and C. omeinensis were diploid with chromosome 2n = 2x = 18, and C. deltoidea was an autotriploid with chromosomes 2n = 3x = 27, which explained why this species was morphologically so isolated from other species and its sterile and narrow distributing regions. The relationship between C. chinensis and C. omeinensis based on chromosome data was discussed. The probable origin of C. deltoidea was also suggested.
China
;
Chromosomes, Plant
;
genetics
;
Coptis
;
genetics
;
Diploidy
;
Karyotyping