The educational equity includes the educational rights equity and opportunity equality. Nowadays, real non-equality phenomena exist in our country including in the field of higher education because of many influential factors that affect the educational equity. In the article the author makes the philosophical thinking about the equity and efficiency in higher education through the analysis of these non-equality phenomena, and puts forward that we must hold the principle that efficiency is first, and equity should be stressed at the same time under the condition of insufficient education resource. Meanwhile the educational equity should be enhanced according to the system arrangement and policy adjustment.