1.Distribution of tap1 and tap2 loci allelic and genotypic frequencies in Chinese Hans.
Wu SHEN ; Tong SHEN ; Biao YIN ; Jie-Wei ZHENG ; Da-Zhuang LIU ; Ming-Liang FENG
Journal of Experimental Hematology 2009;17(3):777-781
This study was aimed to investigate the distribution and implication of tap1 (transporter associated with antigen processing) and tap2 loci allelic and genotypic frequencies. The distribution of tap1 and tap2 loci allelic and genotypic frequencies in 339 random samples of healthy Chinese Hans was analyzed by TaqMan PCR. Several genetic information about power of discrimination, cumulative DP, polymorphism information content, expected heterozygosity and observed heterozygosity were calculated. The results indicated that 5 tap1 alleles (tap1*0101, 020101, 020102, 0301 and 0401) and 4 tap2 alleles (tap2*0101, 0102, 0103 and 0201) were detected in all samples. 8 tap1 genotypes were found which account for 53.3% of the theoretic genotype and 6 tap2 genotypes were found which account for 60% of the theoretic genotype. The genotyping results of tap1 and tap2 both conform to the Hardy-Weinberg expectations (p > 0.05). Tap1*0101 (79.79%) and tap2*0101 (82.74%) are the most common alleles in Chinese Hans. It is concluded that tap1*0101 and tap2*0101 are most common alleles in Chinese Hans, tap1 and tap2 loci carry some power of individual discrimination and polymorphism information content. These two locl can be used for the research in the fields of human genetics, linkage analysis of genetic disease genes, paternity test and individual identification and so on.
ATP-Binding Cassette Sub-Family B Member 2
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ATP-Binding Cassette Transporters
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genetics
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ATP-Binding Cassette, Sub-Family B, Member 3
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Alleles
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Asian Continental Ancestry Group
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genetics
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Gene Frequency
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Genotype
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Haplotypes
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Humans
2.Advances in the studies on human platelet alloantigen--review.
Hui HUANG ; Ming-Liang FENG ; Da-Zhuang LIU
Journal of Experimental Hematology 2006;14(6):1262-1268
Human platelet alloantigens (HPA) are specific antigens carried by platelet glycoproteins, which genes showing single nucleotide polymorphism. HPA can induce alloantibodies bringing about alloimmune response. They play important roles in post-transfusion refractoriness to platelets, post-transfusion thrombocytopenic purpura, fetomaternal alloimmune thrombocytopenia, and graft-versus-host disease. Because of their side effects in clinical blood-transfusion, there were a great deal of studies on HPA during last few decades. This review focuses on the nomenclature of HPA, the polymorphisms of platelet glycoproteins, HPA typing of the serological and molecular technology, as well as the mechanism of alloimmunization to HPA and correlated diseases.
Antigens, Human Platelet
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classification
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immunology
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Humans
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Isoantibodies
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immunology
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Platelet Membrane Glycoproteins
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genetics
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Polymorphism, Single Nucleotide
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Transfusion Reaction
3.Polymorphism of the human platelet alloantigens HPA-3 and HPA-9w in the Chinese Han population.
Hui HUANG ; Ming-liang FENG ; Tong SHEN ; Wei SHEN ; Biao YIN ; Da-zhuang LIU
Chinese Journal of Medical Genetics 2007;24(5):586-588
OBJECTIVETo study the polymorphism of human platelet alloantigens HPA-3 and HPA-9w in the Chinese Han population.
METHODSA total of 1000 unrelated Chinese Han blood donors from different provinces of China were genotyped for HPA-3 and HPA-9w using PCR-sequence specific primer assay.
RESULTSGene frequencies of 1000 Chinese Hans for HPA-3a and HPA-3b were 0.5935 and 0.4065 respectively, and all of them were HPA-9a positive. The distributions of HPA-3, HPA-9w of Chinese Hans which detected by chi-square criterion fit Hardy-Weinberg equilibrium. There were significant differences of the HPA-3 alleles gene frequency between Guangdong province and other five investigated provinces which included Shanxi, Heilongjiang, Zhejiang, Yunnan and Jiangsu. In comparison to other ethnic groups, no significant differences were observed in the distributions of HPA-3 except the Vietnamese and Australian.
CONCLUSIONThe results show that the chance of HPA-3 incompatibility were 0.3661 in random transfusion, and also provide a basis for researching on alloimmune thrombocytopenia and HPA-matched transfusion.
Alleles ; Antigens, Human Platelet ; genetics ; immunology ; Asian Continental Ancestry Group ; genetics ; China ; ethnology ; DNA ; genetics ; Ethnic Groups ; genetics ; Gene Frequency ; Genotype ; Histocompatibility ; genetics ; Humans ; Polymorphism, Genetic
4.Molecular study on CisAB and B(A) blood group in Chinese individuals.
Zhong-hui GUO ; Dong XIANG ; Zi-yan ZHU ; Xi LIU ; Jian-lian WANG ; He-ping CHEN ; Jia-min ZHANG ; Wei SHEN ; Chen WANG ; Da-zhuang LIU
Chinese Journal of Medical Genetics 2004;21(4):321-324
OBJECTIVEThis is a study on some ABO subgroup samples which show discordant results of serological and molecular blood typing, the aim is to clarify their true ABO type by means of nucleotide analysis on exons 6 and 7 of their ABO gene.
METHODSAbsorb-elution test and family investigation were conducted to study 7 samples which were involved in ABO grouping discrepancies. Duplex polymerase chain reaction-restriction fragment length polymorphism(PCR-RFLP) method was used to identify their ABO genotypes. PCR products of exons 6 and 7 were cloned and sequenced.
RESULTSAll the 7 ABO subgroup samples with the discordant results of serological and molecular blood typing were found to have the normal O gene. Four out of them were typed as ABsub by serology, they were all of the A*102/O genotype. Sequencing analysis found all their A gene having the nt467 (C-->T) and nt803 (G-->C) mutation by comparison with the A*101 allele, i.e. their real type should be CisAB/O. Three out of 7 were typed as AsubB by serology and as BO by genotype; and point mutation was detected in all of their B gene. One of them had the nt700 (C-->G) mutation, the other 2 unrelated individuals had the novel nt640 (A-->G) mutation in their B alleles.
CONCLUSIONThrough nucleotide analysis, 7 samples have been typed as AB subgroup in serology with the normal O gene, their real ABO type being CisAB in 4 cases and B(A) in 3 cases. At the same time, a kind of novel B (A)640 allele has been uncovered in this study.
ABO Blood-Group System ; genetics ; Asian Continental Ancestry Group ; genetics ; Blood Grouping and Crossmatching ; China ; Female ; Genotype ; Humans ; Male ; Mutation ; Polymerase Chain Reaction ; Polymorphism, Restriction Fragment Length
5.Ten years outcome observation of infants with hepatitis C virus mother to infant transmission.
Yu-qi YANG ; De-gui SUN ; Cai-yun LIU ; Jian-qiang SUN ; Lai WEI ; Zong-da MENG ; Hui ZHUANG
Chinese Journal of Hepatology 2003;11(9):559-560
OBJECTIVETo study the outcome of hepatitis C virus (HCV) vertical transmitted infants.
METHODSThirteen HCV vertical infected infants were followed up for 10 years. HCV antibody and HCV RNA in the blood samples from them were tested using second generation HCV antibody EIA kits and RT-PCR, respectively.
RESULTSAmong the 13 infants, one developed clinical hepatitis C, and serum HCV antibody and HCV RNA could be detected for 7 and 8 years, respectively. Three were subclinical hepatitis C, serum HCV antibody continued to be positive for 12 months (2 infants) and 24 months (1 infant), respectively, and serum HCV RNA turned to be negative at the 24th month (2 infants) and the 60th month (1 infant), respectively. Nine were HCV insidious infection, whose serum HCV antibody and HCV RNA turned to be negative in 12 months. During the eight to ten years, there was no infants with anti-HCV or HCV RNA positive again.
CONCLUSIONSIt is rarely happened that vertical transmitted HCV induce chronic HCV carrying state and chronic viral hepatitis, and most of the infected infants have good outcome.
Child ; Child, Preschool ; Female ; Hepatitis C ; transmission ; Hepatitis C Antibodies ; blood ; Humans ; Infant ; Infant, Newborn ; Infectious Disease Transmission, Vertical ; Pregnancy ; Time Factors
6.Progress in the study of animal hosts of hepatitis E.
Jian LIU ; Yan-feng CHEN ; Zheng-tai LI ; Da-hong TU ; Hua WU ; Yo-hong ZHU ; Hui ZHUANG
Chinese Journal of Epidemiology 2003;24(4):317-319
Animals
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China
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epidemiology
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Disease Reservoirs
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Hepatitis E
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epidemiology
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transmission
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Hepatitis E virus
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genetics
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isolation & purification
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Humans
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Rodentia
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virology
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Swine
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virology
7.Prevalence and risk factors of peripheral arterial disease in diabetic patients over 50 years old in China.
Heng GUAN ; Yong-Jun LI ; Zhang-Rong XU ; Guang-Wei LI ; Xiao-Hui GUO ; Zhi-Min LIU ; Da-Jin ZOU ; Hui-Li XING ; Wei LIU ; Zheng-Yan SHENG ; Hao-Ming TIAN ; Da-Long ZHU ; De-Min YU ; Wei-Te ZHUANG ; Lu-Lu CHEN ; Jian-Ping WENG
Chinese Medical Sciences Journal 2007;22(2):83-88
OBJECTIVETo investigate the prevalence of peripheral arterial disease (PAD) in China type 2 diabetic patients and to demonstrate the relationships between putative risk factors and PAD.
METHODSIn total 1,397 type 2 diabetic patients aged 50 years and older were enrolled and determined ankle-brachial index (ABI) and brachial-ankle pulse wave velocity (baPWV) in 15 Class III Grade A hospitals in 7 major cities of China.
RESULTSMean patient age was 63.7 +/- 8.2 years and mean duration of diabetes mellitus was 9.39 +/- 7.4 years. Two hundreds and seventy-two (19.47%) patients were diagnosed as PAD by ABI < 0.9, 122 (18.37%) in male and 150 (20.46%) in female. PAD patients had a significantly longer duration of diabetes mellitus, higher hemoglobin A1c, and a significantly lower mean body mass index than non-PAD ones. Aging, smoking, and systolic blood pressure were found to be positively related with the prevalence of PAD. In terms of lipid profiles, no variable was found to relate with PAD. Notably, baPWV showed as the same significant guiding index for PAD, almost matched with ABI.
CONCLUSIONSPAD is a common complication in China type 2 diabetic patients. Therefore, PAD screening and treatment should be emphasized for diabetic patients with high risk factors.
Aged ; China ; epidemiology ; Diabetic Angiopathies ; epidemiology ; Female ; Humans ; Male ; Middle Aged ; Peripheral Vascular Diseases ; epidemiology ; Prevalence ; Risk Factors ; Urban Population ; statistics & numerical data
8.Study on the prevalence of snoring and obstructive sleep apnea-hypopnea syndrome in Guangxi, China.
Jian-hong LIU ; Cai-zhou WEI ; Lu-ying HUANG ; Wu WANG ; Zhi-jian LEI ; Da-hua LIANG ; Feng WANG ; Xiao-yuan WANG ; Kai LIU ; Xiu-juan HOU ; Xiao-jun TANG
Chinese Journal of Epidemiology 2007;28(2):115-118
OBJECTIVETo study the prevalence of snoring and obstructive sleep apnea-hypopnea syndrome (OSAHS) and its high risk factors in Guangxi Zhuang Autonomous Region.
METHODSFrom January 2003 to March 2005, a total number of 11,163 persons aged > or =14 years Zhuang minority living in Guangxi (from Guinan, Guizhong and Guibei) were surveyed. Questionnaire was administered to draw information. Polysomnography(PSG) and in-home polygraphy were performed on participants being studied and who had reported snoring.
RESULTSAmong all the surveyed people, 2940reported snoring with a prevalence of 27.3%. 448 (320 males and 128 females) people reported OSAHS with prevalence as 4.3% (5.9% in males and 2.5% in females). From 14 to 60 year olds, the prevalence of snoring and OSAHS increased with age. Among those above 60 years of age, both the prevalencerates ofsnoring and OSAHS werereduced with age. Among all the study population, 260 (21.6%) had habitual OSAHS a nd 188 (10.8%) hadoccasional OSAHS. The high risk factors of OSAHS were: position during sleep, disease of nose, drinking alcohol, smoking, gender, body mass index (BMI) and age.
CONCLUSIONThe prevalence rates of snoring and OSAHS were 27.3% and 4.3% respectively. From 14 to 60 years of age, the prevalence rates of snoring and OSAHS were increasing with age while from 60 years of age on, the prevalence of snoring and OSAHS reduced with age. The prevalence rates of snoring and OSAHS in males were higher than females. The high risk factors of OSAHS were position during sleep,disease of nose, drinking, smoking,gender, BMI and age.
Adolescent ; Adult ; Aged ; China ; epidemiology ; Female ; Humans ; Male ; Middle Aged ; Prevalence ; Risk Factors ; Sleep Apnea, Obstructive ; epidemiology ; Snoring ; epidemiology
9.Epidemiologic surveillance for bacterial meningitis in 140 000 children under 5 years of age in Nanning district, Guangxi province.
Bai-qing DONG ; Zhen-zhu TANG ; Mei LIN ; Cui-yun LI ; Dong-mei TAN ; Da-bin LIANG ; He-zhuang LIAO ; Xian-zhi LIU ; Yi QUAN ; Jin-song FANG ; Xing-hua WU ; Wei-wen QIN ; P E KILGORE ; W A KENNEDY ; Zhi-yi XU ; J D CLEMENS
Chinese Journal of Epidemiology 2004;25(5):391-395
OBJECTIVETo characterize the incidence, epidemiologic features, etiologic agents and sequelae of bacterial meningitis in children under 5 years of age in Nanning, Guangxi.
METHODSA population-based surveillance was conducted to evaluate children with signs and symptoms of meningitis. All hospitals, township health centers and village clinics in the surveillance area were structured to participate in the case referral and evaluation. Cerebrospinal fluid (CSF) and blood specimens were obtained and processed using standardized microbiologic methods.
RESULTSDuring the 26-month surveillance period, among the children under 5 years old, a total of 1272 cases who met the screening criteria of meningitis were studied. 265 of 1272 cases were identified as clinically diagnosed meningitis, with an incidence rate of 86.36 per 100 000 population. The annual incidence rate under the 38 cases of confirmed bacterial meningitis appeared to be 12.38/100 000. Staphylococcus species accounted for the largest proportion of laboratory-confirmed bacterial meningitis, followed by E. coli and S. pneumoniae. The highest attack rate occurred in neonates < 1 month, followed by children aged 1 - 12 months in the confirmed patients. Meningitis caused by Sp and Hi mainly occurred in children aged 1 - 12 months. All cases of meningitis due to Hi and Sp were children aged 1 - 24 months. 13.16% and 0.00% of the cases survived with complications and sequelae, and the case-fatality rate was 18.42%. 40 bacterial isolates were identified from 1193 blood cultures and 23 from 1211 cerebrospinal fluid samples, but no Neisseria meningitidis was found.
CONCLUSIONMeningitis due to Hi was first confirmed in Guangxi with the incidence of 0.98 per 100 000 population. The annual incidence rate of confirmed bacterial meningitis was 12.38 per 100 000, which was considered an important public health problem in children. Staphylococci was the predominant pathogen in confirmed bacterial meningitis.
Child, Preschool ; China ; epidemiology ; Female ; Humans ; Incidence ; Infant ; Infant, Newborn ; Male ; Meningitis, Bacterial ; epidemiology ; microbiology ; Meningitis, Escherichia coli ; epidemiology ; Meningitis, Haemophilus ; epidemiology ; Population Surveillance ; Staphylococcal Infections ; epidemiology
10.Application of cluster randomization method on typhoid Vi vaccine trails.
Bai-qing DONG ; Jin YANG ; Zhen-zhu TANG ; Hong-hui YANG ; Jun ZENG ; Jie ZHANG ; Ming-liu WANG ; Gui-chen LIANG ; Guo-ai SI ; Cui-yun LI ; Da-bin LIANG ; He-zhuang LIAO ; Rion Leon OCHIAI ; Ali MOHAMMAD ; Camilo J ACOSTA ; John CLEMENS
Chinese Journal of Epidemiology 2005;26(2):97-100
OBJECTIVETo describe the design and application of cluster randomized controlled method on typhoid Vi vaccine trial, and to assess the effect of implementation.
METHODSSimple size calculation of cluster-randomized trial was used to determine the sample size of the two groups and a vaccination campaign was conducted. The study group was given typhoid Vi vaccine and the control group was given meningococcal A vaccine.
RESULTSAccording to sample size calculation, a total sample of 96,121 participants was required and the study areas were divided into 108 clusters. In practice, 53 study clusters with 44,054 participants and 54 control clusters with 48,422 participants were stratified and matched according to size, location (urban or rural), characteristics (school, department, factory, demography) were randomized respectively. Confounding factors of two groups including age, sex, resident area, income, level of education were compared. It was found that the ratio of all confounding factors between the two groups were comparable and balanced.
CONCLUSIONConfounding factors can be better controlled between study group and the control group by applying cluster-randomized method on vaccine trail which enabled the intervention to be more scientifically evaluated; The implementation of cluster randomization trial was simple and easy to be accepted.
Adolescent ; Adult ; Child ; Child, Preschool ; China ; Cluster Analysis ; Female ; Humans ; Male ; Mass Vaccination ; organization & administration ; Middle Aged ; Polysaccharides, Bacterial ; immunology ; Typhoid Fever ; prevention & control ; Typhoid-Paratyphoid Vaccines ; immunology ; Vaccination