1.Advances in epigenetic regulation of Chinese hamster ovary cells.
Lulu YANG ; Miao ZHANG ; Xi ZHANG ; Xiaoyin WANG ; Tianyun WANG ; Yanlong JIA
Chinese Journal of Biotechnology 2023;39(1):149-158
Chinese hamster ovary (CHO) cells play an irreplaceable role in biopharmaceuticals because the cells can be adapted to grow in suspension cultures and are capable of producing high quality biologics exhibiting human-like post-translational modifications. However, gene expression regulation such as transgene silencing and epigenetic modifications may reduce the recombinant protein production due to the decrease of expression stability of CHO cells. This paper summarized the role of epigenetic modifications in CHO cells, including DNA methylation, histone modification and miRNA, as well as their effects on gene expression regulation.
Cricetinae
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Animals
;
Humans
;
Cricetulus
;
CHO Cells
;
Epigenesis, Genetic/genetics*
;
DNA Methylation
;
Gene Expression Regulation
;
Recombinant Proteins/genetics*
2.Construction of recombinant adenovirus expressing EGFRvIII extracellular domain gene and preparation of single domain antibody.
Huimin ZHANG ; Jiaqi XU ; Yi CHENG ; Shan FU ; Yanlong LIU ; Yujing HU ; Yanan DU ; Fuxiang BAO
Chinese Journal of Biotechnology 2022;38(9):3551-3562
The aim of this study was to construct a recombinant adenovirus expressing extracellular domain gene of human epidermal growth factor receptor variant Ⅲ (EGFRvIII ECD), and to prepare single domain antibody targeting EGFRvIII ECD by immunizing camels and constructing phage display antibody library. Total RNA was extracted from human prostate cancer cell line PC-3 cells and reversely transcribed into cDNA. EGFRvIII ECD gene was amplified using cDNA as template, and ligated into pAdTrack-CMV plasmid vector and transformed into E. coli BJ5183 competent cells containing pAdEasy-1 plasmid for homologous recombination. The recombinant adenovirus expressing EGFRvIII ECD was obtained through transfecting the plasmid into HEK293A cells. The recombinant adenovirus was used to immunize Bactrian camel to construct EGFRvIII ECD specific single domain antibody library. The single domain antibody was obtained by screening the library with EGFRvIII protein and the antibody was expressed, purified and identified. The results showed that recombinant adenovirus expressing EGFRvIII ECD was obtained. The capacity of EGFRvIII specific phage single domain antibody library was 1.4×109. After three rounds of enrichment and screening, thirty-one positive clones binding to EGFRvIII ECD were obtained by phage-ELISA, and the recombinant single domain antibody E14 with highest OD450 value was expressed and purified. The recombinant E14 antibody can react with EGFRvIII ECD with high affinity in ELISA assessment. The results indicated that the EGFRvIII specific single domain antibody library with high capacity and diversity was constructed and the single domain antibody with binding activity to EGFRvIII was obtained by screening the library. This study may facilitate the diagnosis and treatment of EGFRvIII targeted malignant tumors in the future.
Adenoviridae/genetics*
;
DNA, Complementary
;
ErbB Receptors
;
Escherichia coli/genetics*
;
Genetic Vectors/genetics*
;
Humans
;
RNA
;
Recombinant Proteins/metabolism*
;
Single-Domain Antibodies
3.A rapid and accurate method for herpesviral gnome editing.
Aijun SUN ; Xiangru WANG ; Shuaikang YANG ; Ying LIU ; Gaiping ZHANG ; Guoqing ZHUANG
Chinese Journal of Biotechnology 2021;37(4):1376-1384
To rapidly and accurately manipulate genome such as gene deletion, insertion and site mutation, the whole genome of a very virulent strain Md5 of Marek's disease virus (MDV) was inserted into bacterial artificial chromosome (BAC) through homogeneous recombination. The recombinant DNA was electroporated into DH10B competent cells and identified by PCR and restriction fragment length polymorphism analysis. An infectious clone of Md5BAC was obtained following transfection into chicken embryo fibroblast (CEF) cells. Furthermore, a lorf10 deletion mutant was constructed by two step Red-mediated homologous recombination. To confirm the specific role of gene deletion, the lorf10 was reinserted into the original site of MDV genome to make a revertant strain. All the constructs were rescued by transfection into CEF cells, respectively. The successful packaging of recombinant viruses was confirmed by indirect immunofluorescence assay. The results of growth kinetics assay and plaques area measurement showed that the lorf10 is dispensable for MDV propagation in vitro. Overall, this study successfully constructed an infectious BAC clone of MDV and demonstrated its application in genome manipulation; the knowledge gained from our study could be further applied to other hepesviruses.
Animals
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Chick Embryo
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Chickens
;
Chromosomes, Artificial, Bacterial
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DNA, Recombinant
;
Herpesvirus 2, Gallid/genetics*
;
Marek Disease
4.Preparation of anti-hCG antibody-like molecule by using a RAD peptide display system.
Mengwen LIU ; Mei WANG ; Qiong WANG ; Huawei XIN
Chinese Journal of Biotechnology 2019;35(5):871-879
By using an RAD peptide display system derived from the ATPase domain of recombinase RadA of Pyrococcus furiosus, an anti-hCG antibody-like molecule was prepared by grafting an hCG-binding peptide to the RAD scaffold. After linking to sfGFP gene, a gene of hCG peptide-grafted RAD was synthesized and cloned into a bacterial expression vector (pET30a-RAD/hCGBP-sfGFP). The vector was transformed into Escherichia coli, and expression of the fusion protein was induced. After isolation and purification of the fusion protein, its binding affinity and specificity to hCG were determined by using a process of immunoabsorption followed by GFP fluorescence measurement. A comparison of hCG-binding activity with a similarly grafted single-domain antibody based on a universal scaffold was performed. The measurement of hCG-binding affinity and specificity revealed that the grafted RAD has an optimally high binding affinity and specificity to hCG, which are better than the grafted single-domain antibody. Moreover, the affinity and specificity of grafted RAD molecule are comparable to those of a commercial monoclonal antibody. In addition, the hCG-binding peptide-grafted RAD molecule has a relatively high biochemical stability, making it a good substitute for antibody with potential application.
Antibodies, Monoclonal
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chemistry
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isolation & purification
;
metabolism
;
Antibody Specificity
;
DNA-Binding Proteins
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genetics
;
metabolism
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Escherichia coli
;
genetics
;
Escherichia coli Proteins
;
metabolism
;
Humans
;
Peptides
;
Recombinant Fusion Proteins
;
genetics
;
metabolism
5.Preparation of a polyclonal antibody against human LYZL4 and its expression in the testis.
Peng HUANG ; Zhi-Fang YANG ; Yi-Xin XU ; Jian-Ying BAO ; Ning ZHANG ; Xiao-E CAO ; Wen-Shu LI
National Journal of Andrology 2017;23(1):3-10
Objective:
To prepare a polyclonal antibody against human lysozyme-like protein 4 (LYZL4) expressed in the prokaryotic system and identify the distribution of LYZL4 in the testis.
METHODS:
The full-length cDNA of LYZL4 was cloned into the pET32a plasmid and the expression of the recombinant LYZL4 (rLYZL4) was induced by IPTG. The rLYZL4 was purified by Ni-NTA and chitin affinity chromatography respectively and its bactericidal activity was observed by bilayer agar plate diffusion assay. The purified rLYZL4 was used as an immunogen to generate the polyclonal antibody, followed by examination of the antibody titer by ELISA and its specificity by Western blot. The distribution of LYZL4 in human tissue, sperm and seminal plasma was identified and its subcellular localization in the testis was determined by immunohistochemistry.
RESULTS:
rLYZL4 was expressed efficiently in the prokaryotic system and exhibited no bacteriolytic activity against M. lysodeikticus and E. coli. The anti-rLYZL4 polyclonal antibody could bind the recombinant protein with a high sensitivity and specificity. LYZL4 was identified in the testis, epididymis and sperm protein extracts and localized in the acrosomal region of round and elongating spermatids.
CONCLUSIONS
An anti-rLYZL4 polyclonal antibody was successfully prepared using the prokaryotic expression system. LYZL4 was detected in the acrosomal region of round and elongating spermatids, suggesting an association with the structure and function of the acrosome.
Acrosome
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immunology
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Animals
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Antibodies
;
analysis
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Blotting, Western
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DNA, Complementary
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Enzyme-Linked Immunosorbent Assay
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Epididymis
;
immunology
;
Escherichia coli
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Humans
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Immunohistochemistry
;
Male
;
Muramidase
;
genetics
;
immunology
;
Plasmids
;
Recombinant Proteins
;
genetics
;
Semen
;
immunology
;
Spermatozoa
;
immunology
;
Testis
;
immunology
6.Cloning, eukaryotic expressing and function analysis of Schistosoma japonicum apoptosis gene Sjcaspase3.
Tao WANG ; Yang HONG ; Hongxiao HAN ; Chao LV ; Bingguang JIA ; Xiaodan CAO ; Qian HAN ; Ke LU ; Hao LI ; Zhiqiang FU ; Jiaojiao LIN
Chinese Journal of Biotechnology 2016;32(7):889-900
For further research of the apoptosis mechanism of Schistosoma japonicum (S. japonicum). The cDNA encoding Sjcaspase3 of Schistosoma japonicum was amplified by polymerase chain reaction (PCR) technique, which contained 900 nucleotides and encoded 299 amino acids. The theory molecular weight and isoelectric point (PI) of the deduced protein is 33.5 kDa and 6.39, respectively. Real-time PCR was used to analyze the transcription profiles of Sjcaspase3 at different development stages of S. japonicum. The results showed that this gene was expressed in all stages of S. japonicum with the highest expression in 21d worms, and the level of gene transcription in 42 d female worms was higher than that of male worms. The recombinant plasmid pXJ40-FLAG-Sjcaspase3 was constructed and transfection into Hela cells successfully. Real-time PCR and Western blotting analysis showed Sjcaspase3 was successfully expressed in Hela cells. Enzyme activity analysis revealed that recombinant Sjcaspase3 possessed the activity to cut substrate DEVD. Flow cytometry proved that Sjcaspase3 could induce early apoptosis of Hela cells. The results provide the basis for proceeding further study on the biological function of Sjcaspase3 and better understand the apoptosis mechanism of S. japonicum.
Animals
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Apoptosis
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Blotting, Western
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Caspase 3
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genetics
;
metabolism
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Cloning, Molecular
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DNA, Complementary
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Female
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HeLa Cells
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Helminth Proteins
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genetics
;
metabolism
;
Humans
;
Male
;
Real-Time Polymerase Chain Reaction
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Recombinant Proteins
;
Schistosoma japonicum
7.Construction of a GFP-fused mouse PACRG baculovirus recombinant vector and expression of the fusion protein in Sf9 inset cells.
Jun-Pin LIU ; Hong-Tao LI ; Wei LI ; Hong LIU ; Ling ZHANG ; Jie MIN ; Ting ZHOU ; Lei ZHOU ; Zhi-Bing ZHANG
National Journal of Andrology 2016;22(7):591-595
ObjectiveTo construct a GFP-fused mouse Parkin co-regulated gene (PACRG) baculovirus recombinant PACRG/GFP-pFastBac1 vector and express the fusion protein in Sf9 insect cells.
METHODSFull-length mouse PACRG cDNA was amplified by PCR and cloned in frame to the vector pFastBac1 with eGFP (rpFBac-PACRG-GFP recombinant vector). The plasmid was transformed into DH10Bac cells to obtain the recombinant bacmid plasmid, the bacmid was transfected into Sf9 insect cells, and the expressed PACRG/GFP fusion protein was analyzed by Western blot and fluorescence microscopy.
RESULTSThe construction of the PACRG/GFP-pFastBac1 baculovirus plasmid was confirmed by sequencing and restriction enzyme digestion. Western blot showed the expression of the fusion protein carrying a green fluorescence in the Sf9 insect cells.
CONCLUSIONSConclusion: A PACRG/GFP-pFastBac1 recombinant baculovirus vector was successfully constructed and the fusion protein was highly expressed in the Sf9 insect cells. Our findings have provided a basis for further studies on the structure of the PACRG protein and regulation of spermatogenesis.
Animals ; Baculoviridae ; Blotting, Western ; DNA, Complementary ; Genetic Vectors ; Green Fluorescent Proteins ; biosynthesis ; Mice ; Plasmids ; Polymerase Chain Reaction ; Proteins ; genetics ; metabolism ; Recombinant Fusion Proteins ; biosynthesis ; Sf9 Cells ; Transfection
8.Expression of Arabidopsis thaliana thioesterase gene in Pichia pastoris.
Zhaocheng HAO ; Tengfei WANG ; Zhongkui LI ; Zikai HAO ; Kun DAI ; Ruiming WANG
Chinese Journal of Biotechnology 2015;31(1):115-122
Thioesterase catalyzes the hydrolysis of acyl-ACP and saturated fatty acyl chain. It plays a key role in the accumulation of medium chain fatty acids in vivo. In this study, to construct an engineering strain to produce MCFAs, the Arabidopsis acyl-ACP thioesterase gene AtFatA was amplified by PCR from cDNA of arabidopsis and double digested by EcoR I/Xba I, then linked to the plasmid digested with same enzymes to get the recombinant plasmid pPICZaA-AtFatA. We transformed the gene into Pichia pastoris GS115 by electroporation and screened positive colonies by YPD medium with Zeocin. Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) results showed that the recombinant enzyme had a molecular of 45 kDa band which was consistent with the predicted molecular mass and we constructed the expression system of gene AtFatA in fungus for the first time. Under shake-flask conditions, Gas Chromatograph-Mass Spectrometer-computer results indicated that recombinant strain produced 51% more extracellular free MCFAs than the wild and its yield reached 28.7% of all extracellular fatty acids. This figure is 10% higher than the control group. The result provides a new way to produce MCFAs.
Arabidopsis
;
genetics
;
Arabidopsis Proteins
;
biosynthesis
;
DNA, Complementary
;
Electrophoresis, Polyacrylamide Gel
;
Electroporation
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Pichia
;
metabolism
;
Plasmids
;
Polymerase Chain Reaction
;
Recombinant Proteins
;
biosynthesis
;
Thiolester Hydrolases
;
biosynthesis
;
Transformation, Genetic
9.Prokaryotic expression of vp3 gene of Muscovy duck parvovirus, and its antiserum preparation for detection of virus multiplication.
Yu HUANG ; Yumin ZHU ; Shijuan DONG ; Ruisong YU ; Yuanshu ZHANG ; Zhen LI
Chinese Journal of Biotechnology 2015;31(1):65-74
New epidemic broke out in recent year which was suspected to be caused by variant Muscovy duck parvovirus (MDPV). For this reason, new MDPV detection methods are needed for the new virus strains. In this study, a pair of primers were designed according to the full-length genome of MDPV strain SAAS-SHNH, which were identified in 2012, and were used to amplify the vp3 gene of MDPV by polymerase chain reaction. After being sequenced, the vp3 gene was subcloned into the prokaryotic expression vector PET28a. The recombinant plasmid was transformed into E. coli BL21 and induced with IPTG. SDS-PAGE and Western blotting analysis showed the MDPV vp3 gene was successfully expressed. After being purified by Ni2+ affinity chromatography system, the recombinant protein was used as antigen to immunize rabbits to obtain antiserum. Western blotting analysis showed that the acquired antiserum could react specifically with VP3 protein of J3D6 strain and MDPV vaccine strain. The antiserum could also be used for detection of cultured MDPV from primary duck embryo fibroblasts by immune fluorescence assay (IFA). It could be concluded that the VP3 protein and its antibody prepared in the research could be used for detection of VP3 antiserum and antigen respectively.
Animals
;
Blotting, Western
;
DNA Primers
;
Ducks
;
virology
;
Electrophoresis, Polyacrylamide Gel
;
Immune Sera
;
biosynthesis
;
Parvovirus
;
Polymerase Chain Reaction
;
Rabbits
;
Recombinant Proteins
;
genetics
;
Viral Proteins
;
genetics
10.Construction of an integration vector carrying hygromycin B resistance gene and its genetic transformation in Rhizopus oryzae.
Min ZHANG ; Shaotong JIANG ; Juan ZHENG ; Zhi ZHENG ; Xingjiang LI ; Lijun PAN ; Shuizhong LUO
Chinese Journal of Biotechnology 2015;31(8):1203-1218
To construct a system of genetic transformation suitable for Rhizopus oryzae, we constructed a single-exchange vector pBS-hygro carrying hygromycin B resistance gene (hph) as its selective marker using gene splicing by overlap extension PCR (SOE PCR) technique. We introduced this recombinant vector into Rhizopus oryzae AS 3.819 by PEG/CaCl2-mediated transformation of protoplast, electroporation of protoplast and germinated spores; and we studied the effects of hydrolysis time, field strength and spore germination time on transformation frequency. We conducted quantitative real-time PCR (qPCR) assay to determine the gene copy number of ldhA integrated in the genome of R. oryzae transformants and its effect on the stability of transformants. We successfully achieved R. oryzae transformants integrated with pBS-hygro-ldhA vector. The optimal hydrolysis time for protoplast production was 140 min, and the optimal field strength of electroporation pulse for protoplast was 13 kV/cm. The optimal germination time of spores for electroporation was 2.5 h, and the optimal field strength of electroporation pulse was 14 kV/cm. The transformation frequency of method based on germinated spores was generally higher than the methods based on protoplast. The qPCR test results suggested that transformants with high copy number of integration in a certain range were relatively stable. Our results provided basis and support for metabolic regulation and genetic engineering breeding of R. oryzae.
DNA, Recombinant
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Electroporation
;
Genetic Engineering
;
Genetic Vectors
;
Hygromycin B
;
Protoplasts
;
Real-Time Polymerase Chain Reaction
;
Rhizopus
;
genetics
;
Transformation, Genetic

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