1.Cyanobacteria based photosynthetic production of sucrose: development and prospect.
Xintong CHI ; Shanshan ZHANG ; Shaoming MAO ; Guodong LUAN ; Quan LUO ; Xuefeng LÜ
Chinese Journal of Biotechnology 2019;35(8):1411-1423
Biorefinery technologies provide promising solutions to achieve sustainable development facing energy and environment crisis, while abundant sugar feedstock is an essential basis for biorefinery industries. Photosynthetic production of sucrose with cyanobacteria is an alternative sugar feedstock supply route with great potentials. Driven by solar energy, cyanobacteria photosynthetic cell factory could directly convert carbon dioxide and water into sucrose, and such a process could simultaneously reduce carbon emissions and supply sugar feedstocks. Here we introduced the history and updated the state-of-the-art on development of cyanobacteria cell factories for photosynthetic production of sucrose, summarized the progress and problems on mechanisms of sucrose synthesis, metabolic engineering strategies and technology expansions, and finally forecasted the future development direction in this area.
Carbon Dioxide
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Cyanobacteria
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Metabolic Engineering
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Photosynthesis
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Sucrose
2.Advances of polymer-monomer production by cyanobacterial cell factory.
Meiwen QIAN ; Chunlin TAN ; Jun NI ; Fei TAO ; Ping XU
Chinese Journal of Biotechnology 2021;37(3):1017-1031
Cyanobacteria is one of the promising microbial chassis in synthetic biology, which serves as a typical host for light-driven production. With the gradual depletion of fossil resources and intensification of global warming, the research on cyanobacterial cell factory using CO2 as carbon resource is ushering in a new wave. For a long time, research focus on cyanobacterial cell factory has mainly been the production of energy products, such as liquid fuels and hydrogen. One of the critical bottlenecks occurring in cyanobacterial cell factory is the poor economic performance, which is mainly caused by the inherent inefficiency of cyanobacteria. The problem is particularly prominent for these extremely cost-sensitive energy products. As an indispensable basis for modern industry, polymer monomers belong to the bulk chemicals with high added value. Therefore, increasing attention has been focused on polymer monomers which are superior in overcoming the economic barrier in commercialization of cyanobacterial cell factories. Here, we systematically review the progress on the production of polymer monomers using cyanobacteria, including the strategies for improving production, and the related technologies for the application of this important microbial cell factory. Finally, we summarize several issues in cyanobacterial synthetic biology and proposed future developing trends in this field.
Cyanobacteria
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Macromolecular Substances
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Polymers
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Synthetic Biology
3.Advances in using adaptive laboratory evolution technology for engineering of photosynthetic cyanobacteria.
Jiawei GAO ; Xiaofei ZHU ; Tao SUN ; Lei CHEN ; Weiwen ZHANG
Chinese Journal of Biotechnology 2023;39(8):3075-3094
Cyanobacteria are the only prokaryotes capable of oxygenic photosynthesis, which have potential to serve as "autotrophic cell factories". However, the synthesis of biofuels and chemicals using cyanobacteria as chassis are suffered from poor stress tolerance and low yield, resulting in low economic feasibility for industrial production. Thus, it's urgent to construct new cyanobacterial chassis by means of synthetic biology. In recent years, adaptive laboratory evolution (ALE) has made great achievements in chassis engineering, including optimizing growth rate, increasing tolerance, enhancing substrate utilization and increasing product yield. ALE has also made some progress in improving the tolerance of cyanobacteria to high light intensity, heavy metal ions, high concentrations of salt and organic solvents. However, the engineering efficiency of ALE strategy in cyanobacteria is generally low, and the molecular mechanisms underpinning the tolerance to various stresses have not been fully elucidated. To this end, this review summarizes the ALE-associated technical strategies and their applications in cyanobacteria chassis engineering, following by discussing how to construct larger ALE mutation library, increase mutation frequency of strains and shorten evolution time. Moreover, exploration of the construction principles and strategies for constructing multi-stress tolerant cyanobacteria, and efficient analysis the mutant libraries of evolved strains as well as construction of strains with high yield and strong robustness are discussed, with the aim to facilitate the engineering of cyanobacteria chassis and the application of engineered cyanobacteria in the future.
Technology
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Photosynthesis/genetics*
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Cyanobacteria/genetics*
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Light
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Biofuels
4.Research for Seasonal Plankton Distribution of In-land Water in Gwang-ju Area.
Korean Journal of Legal Medicine 2011;35(1):16-21
In the forensic practice, the reliability of diatom test as a supportive measure to diagnose drowning is still disputed, from trustworthy to worthless. Some of the reason for the controversy is low sensitivity of the test, possibility of postmortem contamination and the detection of diatom in the tissues of non-drowned body. However, there is a variation of the diatom flora by season and by locale and it is strongly correlated with the frequency of positive diatom test outcomes. Therefore, if there is a profile of the diatom flora at a site, it can be compared with the diatom genera found in tissues of the immersed bodies, and also the test result can be predicted or verified. On each season, at three aquatic locations where drowning victims are often found, the author collected water samples and examined the plankton species of the samples, including dominant species and total number of plankton by site and by season. The examination result showed 16 species of diatoms, 20 species of green algae, 6 species of cyanobacteria, and 6 species of other algae. There is an enormous difference of population of algae by site(39 cells ~ 37,180 cells), but conspicuous periodicity of types and numbers of algae is not noted by season and by depth.
Chlorophyta
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Cyanobacteria
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Diatoms
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Drowning
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Periodicity
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Plankton
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Seasons
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Water
5.Optimization of cultivation conditions in se-enriched Spirulina platensis.
Zhi HUANG ; Wen-Jie ZHENG ; Bao-Jiang GUO
Chinese Journal of Biotechnology 2002;18(3):373-376
Orthogonal combination design was adopted in examining the Spirulina platensis (S. platensis) yield and the influence of four factors (Se content, Se-adding method, S content and NaHCO3 content) on algae growth. The results showed that Se content, Se-adding method and NaHCO3 content were key factors in cultivation conditions of Se-enriched S. platensis with the optimal combination being Se at 300 mg/L, Se-adding amount equally divided into three times and NaHCO3 at 16.8 g/L. Algae yield had a remarkable correlation with OD560 and floating rate by linear regression analysis. There was a corresponding relationship between effects of the four factors on algae yield and on OD560, floating rate too. In conclusion, OD560 and floating rate could be served as yield-forming factors.
Bicarbonates
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analysis
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Culture Media
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Cyanobacteria
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growth & development
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Selenium
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analysis
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pharmacology
6.A new method for isolating gas vesicles from Microcystis for ultrasound contrast.
Rui XU ; Huan LONG ; Yinghui WANG ; Kaiyao HUANG
Chinese Journal of Biotechnology 2022;38(4):1589-1601
Gas vesicles are a unique class of gas-filled protein nanostructures which are commonly found in cyanobacteria and Halobacterium. The gas vesicles may scatter sound waves and generate harmonic signals, which enabled them to have the potential to become a novel ultrasound contrast agent. However, the current hypertonic cracking method for isolating gas vesicles contains tedious operational procedures and is of low yield, thus not suitable for large-scale application. To overcome these technical challenges, we developed a rapid and efficient method for isolating gas vesicles from Microcystis. The new H2O2-based method increased the yield by three times and shortened the operation time from 24 hours to 7 hours. The H2O2 method is not only suitable for isolation of gas vesicles from laboratory-cultured Microcystis, but also suitable for colonial Microcystis covered with gelatinous sheath. The gas vesicles isolated by H2O2 method showed good performance in ultrasound contrast imaging. In conclusion, this new method shows great potential for large-scale application due to its high efficiency and wide adaptability, and provides technical support for developing gas vesicles into a biosynthetic ultrasonic contrast agent.
Contrast Media
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Cyanobacteria
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Hydrogen Peroxide
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Microcystis
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Proteins/chemistry*
7.Regulation of pH on inflation and deflation of biosynthetic gas vesicles used as ultrasound molecular imaging probes.
Yuxiang GONG ; Huan LONG ; Kaiyao HUANG
Chinese Journal of Biotechnology 2023;39(10):4308-4321
Gas vesicles (GVs) are gas-filled protein nanostructures that can regulate the buoyancy of microorganisms such as cyanobacteria and archaea. Recent studies have shown that GVs have the potential to be used as ultrasound molecular imaging probes in disease diagnosis and treatment. However, the mechanism of the inflation and deflation of GVs remains unclear, which hampers the preservation of GVs and gas replacement. In the present study, the environmental pH value was found to be an important factor in regulating the inflation and deflation of GVs. It can not only regulate the inflation and deflation of GVs in vivo to make Microcystis sp. cells present distinct levitation state, but also regulate the inflation and deflation of purified GVs in vitro, and the regulation process is reversible. Our results may provide a technical support for the large-scale production and preservation of biosynthetic ultrasound molecular imaging probes, especially for gas replacement to meet different diagnostic and therapeutic needs, and would facilitate the application of biosynthetic ultrasound molecular imaging probes.
Cyanobacteria
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Proteins/chemistry*
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Nanostructures/chemistry*
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Molecular Imaging
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Hydrogen-Ion Concentration
8.Analysis of Oropharyngeal Microbiota between the Patients with Bronchial Asthma and the Non-Asthmatic Persons.
Hien Thanh DANG ; Song Ah KIM ; Hee Kuk PARK ; Jong Wook SHIN ; Sang Gue PARK ; Wonyong KIM
Journal of Bacteriology and Virology 2013;43(4):270-278
Bronchial asthma can be triggered by microbial agents in the oropharynx. This study was designed to identify the differences in microbiota of oropharynx of bronchial asthmatic patients in contrast to normal controls. In order to resolve the qualitative and quantitative diversity of the 16S rRNA gene present in the oropharynx microbiota of 4 patients and 4 controls, we compared microbial communities using Sanger sequencing and 376 sequences of 16S rRNA gene were analyzed. Of the total microbial diversity detected in the oropharynx in asthmatic patients 45.6% comprised members of the Firmicutes. In contrast, Proteobacteria (44.0%) dominated the oropharyngeal microbiota in the normal control group. Members of the Bacteroidetes, Fusobacteria, Actinobacteria, TM7, Cyanobacteria and unclassified bacteria were present in both groups. In conclusion, the difference in the microbiota of the oropharynx between patients and normal individuals could trigger symptomatic attacks in bronchial asthma.
Actinobacteria
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Asthma*
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Bacteria
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Bacteroidetes
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Cyanobacteria
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Fusobacteria
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Genes, rRNA
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Humans
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Metagenome
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Microbiota*
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Oropharynx
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Proteobacteria
9.Engineering photosynthetic cyanobacterial chassis: a review.
Qin WU ; Lei CHEN ; Jiangxin WANG ; Weiwen ZHANG
Chinese Journal of Biotechnology 2013;29(8):1086-1099
Photosynthetic cyanobacteria possess a series of good properties, such as their abilities to capture solar energy for CO2 fixation, low nutritional requirements for growth, high growth rate, and relatively simple genetic background. Due to the high oil price and increased concern of the global warming in recent years, cyanobacteria have attracted widespread attention because they can serve as an 'autotrophic microbial factory' for producing renewable biofuels and fine chemicals directly from CO2. Particularly, significant progress has been made in applying synthetic biology techniques and strategies to construct and optimize cyanobacteria chassis. In this article, we critically summarized recent advances in developing new methods to optimize cyanobacteria chassis, improving cyanobacteria photosynthetic efficiency, and in constructing cyanobacteria chassis tolerant to products or environmental stresses. In addition, various industrial applications of cyanobacteria chassis are also discussed.
Biofuels
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Cyanobacteria
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genetics
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physiology
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Genetic Engineering
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methods
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Photosynthesis
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Synthetic Biology
;
methods
10.Progress in structure and CO2-concentrating mechanism of carboxysomes.
Chinese Journal of Biotechnology 2014;30(8):1164-1171
Carboxysomes are extremely efficient microcompartments committed to CO2 fixation due to tailored CO2-concentrating mechanism (CCM). In cyanobacteria and some chemoautotrophs, carboxysomes as organelle-like microbodies encapsulate ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) and carbonic anhydrase (CA). Together with active inorganic carbon uptake transporters, carboxysomes accumulate HCO3(-) in the cytoplasm, leading to high efficiency of carbon fixation. Based on the elucidation of structures and functionalities, heterologous production of carboxysomes has been achieved so far. In fact, the genes encoding either vacant carboxysome shell or only interior components have been characterized. This review summarizes the discovery along with types, showcases molecular structures and roles of carboxysomes in CCM, and presents their broad applications in metabolic engineering.
Biological Transport
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Carbon
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metabolism
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Carbon Cycle
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Carbon Dioxide
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metabolism
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Cyanobacteria
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metabolism
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Metabolic Engineering