1.Selection of reference genes of Siraitia grosvenorii by real-time PCR.
Dong-ping TU ; Chang-ming MO ; Xiao-jun MA ; Huan ZHAO ; Qi TANG ; Jie HUANG ; Li-mei PAN ; Rong-chang WEI
China Journal of Chinese Materia Medica 2015;40(2):204-209
Siraitia grosvenorii is a traditional Chinese medicine also as edible food. This study selected six candidate reference genes by real-time quantitative PCR, the expression stability of the candidate reference genes in the different samples was analyzed by using the software and methods of geNorm, NormFinder, BestKeeper, Delta CT method and RefFinder, reference genes for S. grosvenorii were selected for the first time. The results showed that 18SrRNA expressed most stable in all samples, was the best reference gene in the genetic analysis. The study has a guiding role for the analysis of gene expression using qRT-PCR methods, providing a suitable reference genes to ensure the results in the study on differential expressed gene in synthesis and biological pathways, also other genes of S. grosvenorii.
Cucurbitaceae
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genetics
;
RNA, Ribosomal, 18S
;
genetics
;
Real-Time Polymerase Chain Reaction
;
methods
;
Reference Standards
2.Efficient genetic transformation and CRISPR/Cas9-mediated genome editing of watermelon assisted by genes encoding developmental regulators.
Wenbo PAN ; Zhentao CHENG ; Zhiguo HAN ; Hong YANG ; Wanggen ZHANG ; Huawei ZHANG
Journal of Zhejiang University. Science. B 2022;23(4):339-344
Cucurbitaceae is an important family of flowering plants containing multiple species of important food plants, such as melons, cucumbers, squashes, and pumpkins. However, a highly efficient genetic transformation system has not been established for most of these species (Nanasato and Tabei, 2020). Watermelon (Citrullus lanatus), an economically important and globally cultivated fruit crop, is a model species for fruit quality research due to its rich diversity of fruit size, shape, flavor, aroma, texture, peel and flesh color, and nutritional composition (Guo et al., 2019). Through pan-genome sequencing, many candidate loci associated with fruit quality traits have been identified (Guo et al., 2019). However, few of these loci have been validated. The major barrier is the low transformation efficiency of the species, with only few successful cases of genetic transformation reported so far (Tian et al., 2017; Feng et al., 2021; Wang JF et al., 2021; Wang YP et al., 2021). For example, Tian et al. (2017) obtained only 16 transgenic lines from about 960 cotyledon fragments, yielding a transformation efficiency of 1.67%. Therefore, efficient genetic transformation could not only facilitate the functional genomic studies in watermelon as well as other horticultural species, but also speed up the transgenic and genome-editing breeding.
CRISPR-Cas Systems
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Citrullus/genetics*
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Cucurbitaceae/genetics*
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Gene Editing
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Plant Breeding
;
Transformation, Genetic
3.Study on exogenous hormones inducing parthenocarpy fruit growth and development and quality of Siraitia grosvenorii.
Jie HUANG ; Dong-ping TU ; Xiao-jun MA ; Chang-ming MO ; Li-mei PAN ; Long-hua BAI ; Shi-xin FENG
China Journal of Chinese Materia Medica 2015;40(18):3567-3572
To explore the growth and development and analyze the quality of the parthenocarpy fruit induced by exogenous hormones of Siraitia grosvenorii. the horizontal and vertical diameter, volume of the fruit were respectively measured by morphological and the content of endogenous hormones were determined by ELISA. The size and seed and content of mogrosides of mature fruit were determined. The results showed that the fruit of parthenocarpy was seedless and its growth and development is similar to the diploid fruit by hand pollination and triploid fruit by hand pollination or hormones. But the absolute value of horizontal and vertical diameter, volume of parthenocarpy fruit was less than those of fruit by hand pollination, while triploid was opposite. The content of IAA, ABA and ratio of ABA/GA was obviously wavy. At 0-30 d the content of IAA and ABA of parthenocarpy fruit first reduced then increased, content of IAA and GA parthenocarpy fruit was higher than that of fruit by hand pollination. Mogrosides of parthenocarpy fruit was close to pollination fruit. Hormones can induce S. grosvenorii parthenocarpy to get seedless fruit and the fruit shape and size and quality is close to normal diploid fruit by hand pollination and better than triploid fruit by hormone or hand pollination.
Cucurbitaceae
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chemistry
;
drug effects
;
genetics
;
growth & development
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Diploidy
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Fruit
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chemistry
;
genetics
;
growth & development
;
Plant Growth Regulators
;
pharmacology
4.Extraction of total RNA and cloning of sgDHAR gene from Siraitia grosvenorii.
Rong-Chang WEI ; Huan ZHAO ; Xiao-Jun MA ; Ke MI ; Chang-Ming MO ; Li-Mei PAN ; Long-Hua BAI ; Qi TANG
Acta Pharmaceutica Sinica 2014;49(1):115-123
Total RNA was isolated from Siraitia grosvenorii fruit by the method of modified Trizol, according to S. grosvenorii fruit characteristics of rich phenols, polysaccharide, oil and proteins. The OD260/280, OD260/230, RNA integrity (RIN) and yield of the total RNA with this method were 2.01, 2.02, 9.50 and 260 mirog.g-1, respectively. The open reading frame (ORF) of dehydroascorbate reductase (DHAR), named as SgDHAR, was cloned by rapid amplification of cDNA ends (RACE) and RT-PCR method from S. grosvenorii. The GenBank accession number for this gene is KC907731. The SgDHAR gene contains a full-length cDNA of 1,252 bp including ORF of 819 bp and encodes a predicted protein of 272 amino acids. The molecular mass is 30.217 7 kD and the isoelectric point is 8.76. Homology comparison showed that it shared 87% nucleotide sequence homology with Cucumis sativus. Expression patterns using qRT-PCR analysis showed that SgDHAR was mainly expressed in fruit and stem, followed by flower, and was lowest in root, while the expression level was 6.83 times in triploid. T than that in diploid. Therefore, SgDHAR gene may be involved in abortion of triploid seedless S. grosvenorii.
Amino Acid Sequence
;
Base Sequence
;
Cloning, Molecular
;
Cucurbitaceae
;
chemistry
;
genetics
;
DNA, Complementary
;
genetics
;
Flowers
;
chemistry
;
genetics
;
Fruit
;
chemistry
;
genetics
;
Molecular Conformation
;
Open Reading Frames
;
Oxidoreductases
;
genetics
;
metabolism
;
Phylogeny
;
Plant Roots
;
chemistry
;
genetics
;
Plant Stems
;
chemistry
;
genetics
;
Plants, Medicinal
;
chemistry
;
genetics
;
Protein Structure, Secondary
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RNA, Plant
5.An oriental melon 9-lipoxygenase gene CmLOX09 response to stresses, hormones, and signal substances.
Li-Jun JU ; Chong ZHANG ; Jing-Jing LIAO ; Yue-Peng LI ; Hong-Yan QI
Journal of Zhejiang University. Science. B 2018;19(8):596-609
In plants, lipoxygenases (LOXs) play a crucial role in biotic and abiotic stresses. In our previous study, five 13-LOX genes of oriental melon were regulated by abiotic stress but it is unclear whether the 9-LOX is involved in biotic and abiotic stresses. The promoter analysis revealed that CmLOX09 (type of 9-LOX) has hormone elements, signal substances, and stress elements. We analyzed the expression of CmLOX09 and its downstream genes-CmHPL and CmAOS-in the leaves of four-leaf stage seedlings of the oriental melon cultivar "Yumeiren" under wound, hormone, and signal substances. CmLOX09, CmHPL, and CmAOS were all induced by wounding. CmLOX09 was induced by auxin (indole acetic acid, IAA) and gibberellins (GA3); however, CmHPL and CmAOS showed differential responses to IAA and GA3. CmLOX09, CmHPL, and CmAOS were all induced by hydrogen peroxide (H2O2) and methyl jasmonate (MeJA), while being inhibited by abscisic acid (ABA) and salicylic acid (SA). CmLOX09, CmHPL, and CmAOS were all induced by the powdery mildew pathogen Podosphaera xanthii. The content of 2-hexynol and 2-hexenal in leaves after MeJA treatment was significantly higher than that in the control. After infection with P. xanthii, the diseased leaves of the oriental melon were divided into four levels-levels 1, 2, 3, and 4. The content of jasmonic acid (JA) in the leaves of levels 1 and 3 was significantly higher than that in the level 0 leaves. In summary, the results suggested that CmLOX09 might play a positive role in the response to MeJA through the hydroperoxide lyase (HPL) pathway to produce C6 alcohols and aldehydes, and in the response to P. xanthii through the allene oxide synthase (AOS) pathway to form JA.
Abscisic Acid
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Acetates/chemistry*
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Aldehyde-Lyases/metabolism*
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Aldehydes/chemistry*
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Cucurbitaceae/genetics*
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Cyclopentanes/chemistry*
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Cytochrome P-450 Enzyme System/metabolism*
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Gene Expression Profiling
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Gene Expression Regulation, Plant
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Hormones/metabolism*
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Hydrogen Peroxide/metabolism*
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Intramolecular Oxidoreductases/metabolism*
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Lipoxygenase/metabolism*
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Oxylipins/chemistry*
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Plant Leaves/genetics*
;
Plant Proteins/metabolism*
;
Promoter Regions, Genetic
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Salicylic Acid/chemistry*
;
Seedlings/metabolism*
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Signal Transduction
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Stress, Physiological
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Transgenes