1.Cryptosporidium hominis Infection Diagnosed by Real-Time PCR-RFLP.
Hyeng Il CHEUN ; Kyungjin KIM ; Sejoung YOON ; Won Ja LEE ; Woo Yoon PARK ; Seobo SIM ; Jae Ran YU
The Korean Journal of Parasitology 2013;51(3):353-355
There are approximately 20 known species of the genus Cryptosporidium, and among these, 8 infect immunocompetent or immunocompromised humans. C. hominis and C. parvum most commonly infect humans. Differentiating between them is important for evaluating potential sources of infection. We report here the development of a simple and accurate real-time PCR-based restriction fragment length polymorphism (RFLP) method to distinguish between C. parvum and C. hominis. Using the CP2 gene as the target, we found that both Cryptosporidium species yielded 224 bp products. In the subsequent RFLP method using TaqI, 2 bands (99 and 125 bp) specific to C. hominis were detected. Using this method, we detected C. hominis infection in 1 of 21 patients with diarrhea, suggesting that this method could facilitate the detection of C. hominis infections.
Child
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Cryptosporidiosis/*diagnosis/*parasitology
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Cryptosporidium/*classification/*genetics
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Female
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Genotype
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Humans
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Polymerase Chain Reaction/methods
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Polymorphism, Restriction Fragment Length
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Sensitivity and Specificity
2.Detection of cryptosporidium infection among AIDS patients in Guangdong and Yunnan.
Xiao-hua LE ; Hui WANG ; Ji-zhou GOU ; Xin-chun CHEN ; Gui-lin YANG ; Qian-ting YANG ; Xiao-he LI ; Bo-ping ZHOU ; Hui-qin LI ; Wei-ping CAI
Chinese Journal of Experimental and Clinical Virology 2008;22(5):339-341
OBJECTIVETo investigate the infection of Cryptosporidium and its epidemiological characteristics in AIDS patients of Southern China.
METHODSStool samples colleted from AIDS confirmed patients. The samples were detected for oocyst of Cryptosporidium by acid fast bacteria stain and indirect fluorescent antibody stain respectively, CD4 count was detected by Flow Cytometry.
RESULTS212 samples of fresh stool obtained from the AIDS patients who live in Guangdong and Yunnan province. The total infection rate of Cryptosporidium in AIDS patients was 4.25% (9/212), the infectious rate of oocyst in the group of 50- 59-years-old was significantly higher than those in 30-39 (P < 0.01); the infectious rate of oocyst in patients with antiretroviral therapy (ART) was also significantly lower (P = 0.0000); we found the patients coinfected with Cryptosporidium with CD4 count all below 100 cells/microl. However, there were no any difference between the infectious rate to the patient's gender, areas and stool shape.
CONCLUSIONAIDS patients infected by Cryptosporidium are not rare in southern China, and the infectious rate was lower than western country. Patients received ART could decrease the infectious rate of Cryptosporidium, Cryptosporidium always happen in patient whose CD4 count was very low (< 100 cells/microl).
AIDS-Related Opportunistic Infections ; parasitology ; Acquired Immunodeficiency Syndrome ; complications ; parasitology ; Animals ; Antigens, Protozoan ; CD4 Lymphocyte Count ; China ; Cryptosporidiosis ; diagnosis ; etiology ; immunology ; parasitology ; Cryptosporidium ; chemistry ; isolation & purification ; Feces ; parasitology ; Flow Cytometry ; HIV Infections ; parasitology ; Humans ; Oocysts ; Staining and Labeling
3.Internal Amplification Control for a Cryptosporidium Diagnostic PCR: Construction and Clinical Evaluation.
Yousry HAWASH ; M M GHONAIM ; Ayman S AL-HAZMI
The Korean Journal of Parasitology 2015;53(2):147-154
Various constituents in clinical specimens, particularly feces, can inhibit the PCR assay and lead to false-negative results. To ensure that negative results of a diagnostic PCR assay are true, it should be properly monitored by an inhibition control. In this study, a cloning vector harboring a modified target DNA sequence (approximately375 bp) was constructed to be used as a competitive internal amplification control (IAC) for a conventional PCR assay that detects approximately550 bp of the Cryptosporidium oocyst wall protein (COWP) gene sequence in human feces. Modification of the native PCR target was carried out using a new approach comprising inverse PCR and restriction digestion techniques. IAC was included in the assay, with the estimated optimum concentration of 1 fg per reaction, as duplex PCR. When applied on fecal samples spiked with variable oocysts counts, approximately2 oocysts were theoretically enough for detection. When applied on 25 Cryptosporidium-positive fecal samples of various infection intensities, both targets were clearly detected with minimal competition noticed in 2-3 samples. Importantly, both the analytical and the diagnostic sensitivities of the PCR assay were not altered with integration of IAC into the reactions. When tried on 180 randomly collected fecal samples, 159 were Cryptosporidium-negatives. Although the native target DNA was absent, the IAC amplicon was obviously detected on gel of all the Cryptosporidium-negative samples. These results imply that running of the diagnostic PCR, inspired with the previously developed DNA extraction protocol and the constructed IAC, represents a useful tool for Cryptosporidium detection in human feces.
Cryptosporidiosis/*diagnosis/*parasitology
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Cryptosporidium/genetics/*isolation & purification
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DNA Primers/genetics
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DNA, Protozoan/genetics
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Feces/parasitology
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Humans
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Polymerase Chain Reaction/methods/*standards
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Reference Standards
4.Comparative Sensitivity of PCR Primer Sets for Detection of Cryptosporidium parvum.
Jae Ran YU ; Soo Ung LEE ; Woo Yoon PARK
The Korean Journal of Parasitology 2009;47(3):293-297
Improved methods for detection of Cryptosporidium oocysts in environmental and clinical samples are urgently needed to improve detection of cryptosporidiosis. We compared the sensitivity of 7 PCR primer sets for detection of Cryptosporidium parvum. Each target gene was amplified by PCR or nested PCR with serially diluted DNA extracted from purified C. parvum oocysts. The target genes included Cryptosporidium oocyst wall protein (COWP), small subunit ribosomal RNA (SSU rRNA), and random amplified polymorphic DNA. The detection limit of the PCR method ranged from 10(3) to 10(4) oocysts, and the nested PCR method was able to detect 10(0) to 10(2) oocysts. A second-round amplification of target genes showed that the nested primer set specific for the COWP gene proved to be the most sensitive one compared to the other primer sets tested in this study and would therefore be useful for the detection of C. parvum.
Animals
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Cryptosporidiosis/diagnosis/*parasitology
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Cryptosporidium parvum/genetics/*isolation & purification
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DNA Primers/*genetics
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DNA, Protozoan/diagnostic use/genetics
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Humans
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Polymerase Chain Reaction/*methods
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Sensitivity and Specificity