1.Cloning and sequencing of the gene coding for diphtheria toxin from corynebacterium diphtheriae vaccine strain at IVAC
Journal of Preventive Medicine 2003;13(6):65-70
In this study, PCR technique was used with 2 primer pairs for amplifying DNA fragments at 5’ and 3’ of the gene encoding diphteria toxine of the strains Corynebacterium diphtheriae. After the cloning and sequencing, 2 separated fragments were joined to form a complete gene. The sequence of gene was translated into protein and the results were submitted into Gene Bank Database
Diphtheria Toxin
;
Genes
;
Corynebacterium diphtheriae
2.Identification and analysis of 2 Corynebacterium diphtheria strains in Guangdong Province.
Zhen Cui LI ; Mei Zhen LIU ; Yan Mei FANG ; Zi Jun GONG ; Xu Lin WANG ; Jing Diao CHEN ; Bo Sheng LI
Chinese Journal of Preventive Medicine 2022;56(4):427-432
Objective: To identify and analyze two strains of C. diphtheriae in Guangdong Province by combining whole genome sequencing with traditional detection methods. Methods: The C. diphtheriae was isolated from Guangzhou in 2010 and Zhuhai in 2020 respectively. Isolates were identified by API Coryne strips and MALDI-TOF-MS. Genomic DNA was sequenced by using Illumina. The assembly was performed for each strain using CLC software. J Species WS online tool was used for average nucleoside homology identification, then narKGHIJ and tox gene were detected by NCBI online analysis tool BLSATN. MEGA-X was used to build a wgSNP phylogenetic tree. Results: GD-Guangzhou-2010 was Belfanti and GD-Zuhai-2020 was Gravis. ANIb between GD-Guangzhou-2010 and C. belfantii was 99.61%. ANI between GD-Zhuhai-2020 and C. diphtheriae was 97.64%. BLASTN results showed that the nitrate reduction gene narKGHIJ and tox gene of GD-Guangzhou-2010 was negative, while GD-Zhuhai-2020 nitrate reduction gene narKGHIJ was positive. There were two obvious clades in wgSNP phylogenetic tree. The first clades included all Mitis and Gravis types strains as well as GD-Zhuhai-2020. The second clades contained all isolates of C.belfantii, C.diphtheriae subsp. lausannense and GD-guangzhou-2010. Conclusion: Two non-toxic C. diphtheriae strains are successfully isolated and identified. The phylogenetic tree suggests that GD-Guangzhou-2010 and GD-Zhuhai-2020 are located in two different evolutionary branches.
China/epidemiology*
;
Corynebacterium
;
Corynebacterium diphtheriae/genetics*
;
Diphtheria/microbiology*
;
Humans
;
Nitrates
;
Phylogeny
3.Analysis on identification and traceability of one non-toxigenic Corynebacterium diphtheriae from a patient with diabetic foot in Hainan province.
Xiao Jun ZHOU ; Cun Ren CHEN ; Xu Ming WANG ; Hua WU ; Tao HUANG ; Shao Ling WANG ; Lina NIU
Chinese Journal of Preventive Medicine 2022;56(8):1107-1111
There is a rare case of an elderly diabetic with diabetic foot infection at Hainan General Hospital in September 2021, which was diagnosed as Corynebacterium diphtheriae infection incidentally on routine culture with conventional methods and molecular biological approaches, to aid in diagnosis in clinical practice. Owing to smear staining, Albert staining and VITEK 2 system, automated identification systems viz matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) confirmed combing with 16S ribosomal RNA (16S rRNA) gene has been used for the taxonomic classification of bacteria. Otherwise, toxin gene tox was done for diphtheria toxin synthesis. The isolate was Gram-stain-positive, rod-like arrangement with irregular thickness, with characteristic metachromatic granules, ferment most sugars and homology of 16S rRNA analyses with C. diphtheriae NCTC11397T (MW682323.1) was greater than a 100% possibility, toxin gene tox was negative. The findings lay the foundation to clinical identify and trace of non-toxigenic C. diphtheriae. Moreover, this work provides insights into the non-toxigenic C.diphtheriae that contribute to recognized risk of non-toxigenic C.diphtheriae infections.
Aged
;
Corynebacterium/genetics*
;
Corynebacterium diphtheriae/genetics*
;
Diabetes Mellitus
;
Diabetic Foot
;
Diphtheria/microbiology*
;
Humans
;
RNA, Ribosomal, 16S/genetics*
5.Amino acid exporters and metabolic modification of Corynebacterium glutamicum - a review.
Xiaomei ZHANG ; Yujie GAO ; Ling YANG ; Yi YANG ; Ping ZHENG ; Jibin SUN ; Jinsong SHI ; Zhenghong XU
Chinese Journal of Biotechnology 2020;36(11):2250-2259
Amino acids are important compounds with a wide range of applications in the food, medicine and chemical industries. Corynebacterium glutamicum is a powerful workhorse commonly used in industrial amino acid production, with the scale of more than one million tons. In addition to its efficient anabolism, the effective exporters also ensure the high amino acid production by C. glutamicum. In this review, the research progress of amino acid exporter of C. glutamicum is summarized, to provide the foundation for further improving amino acid production by C. glutamicum via metabolic engineering.
Amino Acids
;
Corynebacterium glutamicum/genetics*
;
Metabolic Engineering
6.Treatment of livestock carcasses in soil using Corynebacterium glutamicum and lysosomal application to livestock burial.
Eun Seon HONG ; Seung Hyuck BANG ; Yang Hoon KIM ; Jiho MIN
Environmental Health and Toxicology 2018;33(2):e2018009-
A method of rapidly decaying livestock carcasses is sought through Corine glutamicum, and furthermore, lysosomes are used to remove toxic microorganisms from livestock carcasses. The landfill was constructed on a laboratory scale. Optimized growth conditions of C. glutamicum that could quickly decay livestock carcasses were determined. Lysosomes were extracted from egg whites and used to treat contaminated soil to confirm their antimicrobial activities. Condition of C. glutamicum was activated, regardless both anaerobic and aerobic conditions, soil exists and, to be close to the optimum conditions as possible temperatures, moisture content was about 1/10 of the culture. Lysosomes were found to be effective in clearing soil contamination. C. glutamicum can accelerate the decay of livestock carcasses. A combination of C. glutamicum and lysomes could be used to treat soil contamination caused by decomposition of livestock.
Burial*
;
Corynebacterium glutamicum*
;
Corynebacterium*
;
Egg White
;
Livestock*
;
Lysosomes
;
Methods
;
Soil*
;
Waste Disposal Facilities
7.Treatment of livestock carcasses in soil using Corynebacterium glutamicum and lysosomal application to livestock burial
Eun Seon HONG ; Seung Hyuck BANG ; Yang Hoon KIM ; Jiho MIN
Environmental Health and Toxicology 2018;33(2):2018009-
A method of rapidly decaying livestock carcasses is sought through Corine glutamicum, and furthermore, lysosomes are used to remove toxic microorganisms from livestock carcasses. The landfill was constructed on a laboratory scale. Optimized growth conditions of C. glutamicum that could quickly decay livestock carcasses were determined. Lysosomes were extracted from egg whites and used to treat contaminated soil to confirm their antimicrobial activities. Condition of C. glutamicum was activated, regardless both anaerobic and aerobic conditions, soil exists and, to be close to the optimum conditions as possible temperatures, moisture content was about 1/10 of the culture. Lysosomes were found to be effective in clearing soil contamination. C. glutamicum can accelerate the decay of livestock carcasses. A combination of C. glutamicum and lysomes could be used to treat soil contamination caused by decomposition of livestock.
Burial
;
Corynebacterium glutamicum
;
Corynebacterium
;
Egg White
;
Livestock
;
Lysosomes
;
Methods
;
Soil
;
Waste Disposal Facilities
8.Recent advances in developing enabling technologies for Corynebacterium glutamicum metabolic engineering.
Yu WANG ; Ping ZHENG ; Jibin SUN
Chinese Journal of Biotechnology 2021;37(5):1603-1618
Corynebacterium glutamicum is an important workhorse of industrial biotechnology, especially for amino acid bioindustry. This bacterium is being used to produce various amino acids at a level of over 6 million tons per year. In recent years, enabling technologies for C. glutamicum metabolic engineering have been developed and improved, which accelerated construction and optimization of microbial cell factoriers, expanding spectra of substrates and products, and facilitated basic researches on C. glutamicum. With these technologies, C. glutamicum has become one of the ideal microbial chasses. This review summarizes recent key technological developments of enabling technologies for C. glutamicum metabolic engineering and focuses on establishment and applications of CRISPR-based genome editing, gene expression regulation, adaptive laboratory evolution, and biosensor technologies.
Amino Acids
;
Biotechnology
;
Corynebacterium glutamicum/genetics*
;
Gene Editing
;
Metabolic Engineering
9.Advances and prospects in metabolic engineering for the production of amino acids.
Qian MA ; Li XIA ; Miao TAN ; Quanwei SUN ; Mengya YANG ; Ying ZHANG ; Ning CHEN
Chinese Journal of Biotechnology 2021;37(5):1677-1696
Fermentative production of amino acids is one of the pillars of the fermentation industry in China. Recently, with the fast development of metabolic engineering and synthetic biology technologies, the metabolic engineering for production of amino acids has been flourishing. Conventional forward metabolic engineering, reversed metabolic engineering based on omics data and in silico simulation, and evolutionary metabolic engineering mimicking the natural evolution, have shown increasingly promising applications. A series of highly efficient and robust amino acids-producing strains have been developed and applied in the industrial production of amino acids. The increasingly fierce market competition has put forward new requirements for strain breeding and selection, such as developing high value-added amino acids, dynamic regulation of cellular metabolism, and adapting to the requirements of new process. This review summarizes the advances and prospects in metabolic engineering for the production of amino acids.
Amino Acids
;
China
;
Corynebacterium glutamicum/genetics*
;
Metabolic Engineering
;
Synthetic Biology
10.Secretory production of xylanase in Corynebacterium glutamicum using its endogenous elements.
Wei ZHANG ; Xiuxia LIU ; Yankun YANG ; Zhonghu BAI
Chinese Journal of Biotechnology 2019;35(3):425-434
We constructed bicistronic expression system containing AH6 promoter, 5' UTR and its fore 38 bp sequence from Corynebacterium glutamicum, followed by a conserved Shine-Dalgarno (SD) sequence for xylanase expression. The two major secretory pathways signal peptide in C. glutamicum, Tat (CgR0949) and Sec (CspB) dependent signal peptide were added before xylanase for its secretion. Fed-batch cultivation was done in a 5 L jar for high-level xylanase secretion. The enzyme properties of the purified xylanase were then studied, including the effect of temperature and pH on its activity. The xylanase could be secreted into the culture supernatant when the Sec-dependent signal peptide CspB was used, but none was detected when CgR0949 was used. The secretory production level of xylanase in a flask was 486.2 U/mL and become 1 648.7 U/mL when in a 5 L jar, which was 3.4 fold as in the flask. The optimal pH and temperature of xylanase were pH 4.5 and 45 ℃, respectively. Its activity was 80% of initial activity after pretreatment at 4 ℃ for 24 h at pH 4-11, 95% after incubation below 50 ℃ for 15 min, and 20% when the temperature above 60 ℃. The xylanase could be efficiently secreted into the culture medium by C. glutamicum using its own genetic elements, and the secretion level could be improved through large-scale fed-batch cultivation. This bicistronic expression system can provide a useful tool for heterologous proteins secretion in C. glutamicum. In addition, the catalyze activity of xylanase could be further improved by enzyme properties study.
Corynebacterium glutamicum
;
Promoter Regions, Genetic
;
Protein Sorting Signals
;
Protein Transport