1.Study on the reactions of azo compounds with acyl halides mediated by Sm/TiCl4.
Journal of Zhejiang University. Science. B 2006;7(3):198-201
Amides can be obtained in good to excellent yield by Sm/TiCl(4) mediated reductive cleavage of N=N bond in azo compounds and successive acylation in one pot. It offers an alternative method for the synthesis of amides from very simple starting materials directly.
Azo Compounds
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chemistry
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Chlorine Compounds
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chemistry
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Combinatorial Chemistry Techniques
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methods
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Halogens
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chemistry
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Samarium
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chemistry
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Titanium
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chemistry
2.Applications of chemical genetics in biomedical research.
Qingchuan JING ; Jing ZHAO ; Baoxiang ZHAO ; Shangli ZHANG ; Junying MIAO
Journal of Biomedical Engineering 2009;26(2):448-451
Chemical genetics is the science which takes the small molecular compounds as tools to solve the genetics problems or to disturb/adjust normal biological process so as to find out protein functions. Because the small molecules have the diverse chemical characters and the ability to identify the target proteins, they also can be filtrated on the basis of phenotype. So the methods of chemical genetics have been applied in almost all of the researches on biology and medicine. In this paper, the methods to acquire small molecular compounds are introduced. The enormous progress achieved in the field of combinatorial chemistry, which has allowed the rapid production of a large number of chemically diverse molecules, is an important prerequisite to make chemical libraries available to academic researchers. And the applications of the compounds in early embryo development, cell differentiation, on-set and course of disease are discussed, too. The application of small molecules has an enormous impact on our understanding of cell biology. There are many examples where small molecules, in combination with genetic screens, have facilitated the dissection of complex cellular processes.
Combinatorial Chemistry Techniques
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Genetic Techniques
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Genetics
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trends
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Humans
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Molecular Probe Techniques
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Small Molecule Libraries
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chemistry
3.The research progress of dynamic combinatorial chemistry.
Wei HE ; Peng-Wei SHE ; Zheng FANG ; Kai GUO
Acta Pharmaceutica Sinica 2013;48(6):814-823
As a novel branch of combinational chemistry, dynamic combinatorial chemistry (DCC) can be viewed as a technique which combines library synthesis and screening in one pot. By addition of molecular target, ligangds, which show binding affinity or strong interaction with the molecular target, can be amplified an young but rapidly growing branch of combinatorial chemistry, has been widely used in organic chemistry, biochemistry, material fields. Ligands in the library can be amplified, since synthesis of the library is screened by a molecular target. Therefore, these structures could be identified easily. Consequently DCC has been widely used in the lead discovery, material chemistry and other fields. On the basis of the principle and method of DCC, this review emphasizes the three factors of DCC, including molecular targets (bio-enzyme, lectin, nucleic acid, organic molecule, inorganic molecule); reaction (disulphide chemistry, ammoniation reduction reaction, hydrazone chemistry, etc.) and analytical method. Meanwhile, limitation, current situation and future development of DCC were also discussed in this paper.
Combinatorial Chemistry Techniques
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methods
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Enzymes
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chemistry
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Lectins
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chemistry
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Nucleic Acids
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chemistry
5.Application of efficient synthetic techniques in drug research.
Yu ZHOU ; Lei ZHANG ; Zeng LI ; Hong LIU
Acta Pharmaceutica Sinica 2013;48(7):1014-1030
Compound libraries and chemical synthesis play important roles in drug discovery and development, and efficient synthetic techniques can greatly facilitate the drug research. This review highlights the application of some efficient synthetic techniques in drug research including microwave chemistry, click chemistry, combinatorial chemistry, cascade reactions and multicomponent reactions, as well as the construction of diverse and drug-like compound libraries.
Click Chemistry
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Combinatorial Chemistry Techniques
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methods
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Drug Discovery
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methods
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Microwaves
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Pharmaceutical Preparations
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chemical synthesis
6.Application of mass spectrometry to combinatorial chemistry.
Acta Pharmaceutica Sinica 2004;39(7):571-576
7.Genesis, development and application prospect of antibody library: a review.
Chinese Journal of Biotechnology 2011;27(5):690-697
Antibodies are immunoglobulins specifically introduced by immunity response of high animals, with the responsibility for recognising and cleaning out specific antigens. Antibody is not only a powerful weapon against pathogen invasion in the organism, but also a tool for specific molecular recognition used in basic scientific research. The diversity of antibody molecules resulted in the concept of antibody library; each individual animal is a natural antibody library. In the post-genome era, in order to fit various "omics", especially for proteomics requirement of high throughput technology, some gene engineering antibody libraries and antibody alternative libraries have been constructed based on phage display technology. Yet, more and more in vitro display systems such as ribosome display, mRNA display have been used for antibody library study, and that present more advantages than phage display. This mini review outlines the genesis, development and application prospect of antibody libraries according to the published reviews and research articles, and offers up to date development and application prospect of antibody library technology.
Animals
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Antibodies
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genetics
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physiology
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Antibody Diversity
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genetics
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Antibody Specificity
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Combinatorial Chemistry Techniques
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Gene Library
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Humans
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Peptide Library
8.Optimization of technological conditions for one-pot synthesis of (S)-alpha-cyano-3-phenoxybenzyl acetate in organic media.
Ting-Zhou ZHANG ; Li-Rong YANG ; Zi-Qiang ZHU
Journal of Zhejiang University. Science. B 2005;6(3):175-181
Optically active form of alpha-cyano-3-phenoxybenzyl (CPB) alcohol, building block of pyrethroid insecticides, was synthesized as its acetate by the combination of anion-exchange resin (D301)-catalyzed transcyanation between m-phenoxybenzaldehyde (m-PBA) and acetone cyanohydrin (AC), and lipase (from Alcaligenes sp.)-catalyzed enantioselective transesterification of the resulting cyanohydrin with vinyl acetate. Through optimizing technological conditions, the catalyzing efficiency was improved considerably compared to methods previously reported. Concentrations of CPB acetate were determined by gas chromatograph. The enantio excess (e.e.) values of CPB acetate were measured by NMR (nuclear magnetic resonance) method. Effects of solvents and temperatures on this reaction were studied. Cyclohexane was shown to be the best solvent among the three tested solvents. 55 degrees C was the optimal temperature for higher degree of conversion. External diffusion limitation was excluded by raising the rotational speed to 220 r/min. However, internal diffusion could not be ignored, since the catalyst (lipase) was an immobilized enzyme and its particle dimension was not made small enough. The reaction rate was substantially accelerated when the reactant (m-PBA) concentration was as high as 249 mmol/L, but decreased when the initial concentration of m-PBA reached to 277 mmol/L. It was also found that the catalyzing capability of recovered lipase was high enough to use several batches. Study of the mole ratio of AC to m-PBA showed that 2:1 was the best choice. The strategy of adding base catalyst D301 was found to be an important factor in improving the degree of conversion of the reaction from 20% to 80%. The highest degree of conversion of the reaction has reached up to 80%.
Alcaligenes
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enzymology
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Benzaldehydes
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chemistry
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Combinatorial Chemistry Techniques
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methods
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Lipase
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chemistry
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Nitriles
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chemistry
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Organic Chemicals
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chemistry
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Phenyl Ethers
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chemical synthesis
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Technology, Pharmaceutical
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methods
9.Fmoc solid-phase synthesis of cyclopeptide FIK.
Junjun ZHANG ; Wei SHI ; Wuling CHEN
Chinese Journal of Biotechnology 2008;24(3):468-472
We study the techniques of synthesis of disulfide bond-bearing cyclopeptides FIK. This experimentation with the material of Fmoc-aa use Solid-Phase synthesis after condensation by HBTU/HOBt/DIEA to synthesize linear peptide, then cyclopeptide was synthesized by creation of intramolecular disulfide bond by means of 12 oxidation of bis cysteine sulfhydryl of the linear peptide. The crude production was cleaved from the resin together with all protecting group and identified and separated by MALDI-MS and RP-HPLC. The peptide yield was 18%, after purification the purity was more than 97%. It was identified on MALDI-MS and Ellman reagent detection. This method is effective, simple, rapid and obtained good yield, and it's fit for the large-scale production.
Amino Acids
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chemistry
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Combinatorial Chemistry Techniques
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methods
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Disulfides
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chemistry
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Fluorenes
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chemistry
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Molecular Structure
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Peptides, Cyclic
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chemical synthesis
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chemistry
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Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
10.Application of NMR technique in the discovery and pharmacological studies of active substances from natural products.
Zhao-xia MIAO ; Ying-hong WANG
Acta Pharmaceutica Sinica 2013;48(9):1383-1389
The application of HPLC-NMR-MS hyphenated technique in the structural identification of trace substances from complex mixtures and the identification of endogenous and exogenous substances in the establishment process of metabolic profiling have become effective analytical tools in pharmaceutical chemistry, pharmacological and pharmacokinetic studies of active substances from natural products. Metabolomics method based on NMR technology can accurately portray metabolic phenotypes with the characteristics of diseases and a variety of disease-related pathways, and it can greatly enrich and supplement the traditional disease evaluation methods. So it can be used for pharmacological studies of active substances from natural products, such as toxicological studies, the dose optimization, active substances screening and pharmacodynamic evaluation. Hyphenated technique associated with metabolomics method based on NMR technology will accelerate the speed of the discovery of active substances from natural products, and improve the efficiency of their pharmacological evaluation.
Biological Products
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chemistry
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pharmacology
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Chemistry, Pharmaceutical
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Chromatography, High Pressure Liquid
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Combinatorial Chemistry Techniques
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Magnetic Resonance Spectroscopy
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Mass Spectrometry
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Metabolomics
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methods
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Molecular Structure