1.Comparison of two urinary protein preparation methods: nitrocellulose membrane preservation and acetone precipitation.
Xiaorong WANG ; Xundou LI ; Lulu JIA ; Youhe GAO
Chinese Journal of Biotechnology 2014;30(6):982-989
Nitrocellulose membrane based urinary protein preservation method is simple, fast and economic, but its advantage over the traditionally used acetone precipitation method is still unclear. In this work, we prepared urinary proteins by the two methods by LC-MS/MS. Then we used protein spectra counts to assess the reproducibility of the two methods. Proteins identified by the two methods were almost the same in number, spectral count distribution and distribution of coefficients of variation value. In conclusion, nitrocellulose membrane method is generally the same as acetone precipitation method. It can be used for large scale preservation of clinical urine samples.
Acetone
;
Chromatography, Liquid
;
Collodion
;
Humans
;
Mass Spectrometry
;
Proteins
;
isolation & purification
;
Reproducibility of Results
;
Tandem Mass Spectrometry
;
Urine
;
chemistry
2.Development of a colloidal gold-based immunochromatographic strip for rapid detection of Rice stripe virus.
De-Qing HUANG ; Rui CHEN ; Ya-Qin WANG ; Jian HONG ; Xue-Ping ZHOU ; Jian-Xiang WU
Journal of Zhejiang University. Science. B 2019;20(4):343-354
Rice stripe virus (RSV) causes dramatic losses in rice production worldwide. In this study, two monoclonal antibodies (MAbs) 16E6 and 11C1 against RSV and a colloidal gold-based immunochromatographic strip were developed for specific, sensitive, and rapid detection of RSV in rice plant and planthopper samples. The MAb 16E6 was conjugated with colloidal gold and the MAb 11C1 was coated on the test line of the nitrocellulose membrane of the test strip. The specificity of the test strip was confirmed by a positive reaction to RSV-infected rice plants and small brown planthopper (SBPH), and negative reactions to five other rice viruses, healthy rice plants, four other vectors of five rice viruses, and non-viruliferous SBPH. Sensitivity analyses showed that the test strip could detect the virus in RSV-infected rice plant tissue crude extracts diluted to 1:20 480 (w/v, g/mL), and in individual viruliferous SBPH homogenate diluted to 1:2560 (individual SPBH/μL). The validity of the developed strip was further confirmed by tests using field-collected rice and SBPH samples. This newly developed test strip is a low-cost, fast, and easy-to-use tool for on-site detection of RSV infection during field epidemiological studies and paddy field surveys, and thus can benefit decision-making for RSV management in the field.
Antibodies, Monoclonal/chemistry*
;
China
;
Chromatography, Affinity/methods*
;
Collodion/chemistry*
;
Colloids/chemistry*
;
Gold Colloid/chemistry*
;
Materials Testing
;
Membranes, Artificial
;
Oryza/virology*
;
Plant Diseases/virology*
;
Reproducibility of Results
;
Sensitivity and Specificity
;
Species Specificity
;
Tenuivirus/isolation & purification*
3.Elution of urinary proteins preserved on nitrocellulose membrane with heating.
Chinese Journal of Biotechnology 2015;31(9):1387-1392
The preservation of urinary proteins on a membrane plays a vital role in biomarker research, and the efficient elution of proteins preserved on nitrocellulose membrane (NC membrane) determines the application of this method. During the heating elution procedure, we raised the temperature to reduce the intense vortexing time, and kept gentle rotating while precipitation to prevent nitrocellulose reformation. We also used SDS-PAGE and LC-MS/MS to analyze the urinary proteins prepared by heating elution procedure, intense vortexing elution procedure and acetone precipitation method. There was no degradation of proteins prepared by heating elution procedure. Compared with proteins prepared by heating elution method and acetone precipitation method, the overlapping rates of the proteins was almost the same (92.6% versus 96.8%) and the ratios of CV values (< 20%) of the proteins were both high (85.2% and 94.4%). The heating elution procedure achieved good technical reproducibility, and was much simpler and more efficient than the previous one. It can facilitate the application of the preservation of urinary proteins on membrane.
Acetone
;
Biomarkers
;
urine
;
Chromatography, Liquid
;
Collodion
;
Electrophoresis, Polyacrylamide Gel
;
Hot Temperature
;
Humans
;
Proteins
;
isolation & purification
;
Reproducibility of Results
;
Tandem Mass Spectrometry
;
Urine
;
chemistry