1.GSTM1 Tissue Genotype as a Recurrence Predictor in Non-muscle Invasive Bladder Cancer.
Yun Sok HA ; Chunri YAN ; Pildu JEONG ; Won Tae KIM ; Seok Joong YUN ; Isaac YI KIM ; Sung Kwon MOON ; Wun Jae KIM
Journal of Korean Medical Science 2011;26(2):231-236
Tissue genotyping is more useful approach than using blood genomic DNA, which can reflect the effects of the somatic mutations in cancer. Although polymorphisms in glutathione S-transferase (GST) have been associated with the risk of bladder cancer (BC) development, few reports provide information about the prognosis of BC. We investigated glutathione S-transferase mu (GSTM1) and glutathione S-transferase theta (GSTT1) genotypes using genomic DNA from primary 165 BC tissue samples to assess the association with disease prognosis. DNA samples from tumor were analyzed by multiplex polymerase chain reaction (PCR). The results were compared with clinicopathological parameters. The prognostic significance of the GSTs was evaluated by Kaplan-Meier and multivariate Cox regression model. Kaplan-Meier estimates revealed significant differences in time to tumor recurrence according to the GSTM1 tissue genotype (P = 0.038) in non-muscle invasive bladder cancer (NMIBC). Multivariate Cox regression analysis also revealed that the tissue GSTM1 genotype (hazards ratio [HR]: 0.377, P = 0.031) was an independent predictor of bladder tumor recurrence in NMIBC. This identification of GSTM1 tissue genotype as a prognosticator for determining recurrence in NMIBC should prove highly useful in a clinical setting.
Aged
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*Genotype
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Glutathione Transferase/*genetics
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Humans
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Isoenzymes/*genetics
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Kaplan-Meier Estimate
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Middle Aged
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Prognosis
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Proportional Hazards Models
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Recurrence
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Tumor Markers, Biological/metabolism
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Urinary Bladder Neoplasms/diagnosis/*genetics/pathology/*prevention & control
2.Metabolic Pathway Signatures Associated with Urinary Metabolite Biomarkers Differentiate Bladder Cancer Patients from Healthy Controls.
Won Tae KIM ; Seok Joong YUN ; Chunri YAN ; Pildu JEONG ; Ye Hwan KIM ; Il Seok LEE ; Ho Won KANG ; Sunghyouk PARK ; Sung Kwon MOON ; Yung Hyun CHOI ; Young Deuk CHOI ; Isaac Yi KIM ; Jayoung KIM ; Wun Jae KIM
Yonsei Medical Journal 2016;57(4):865-871
PURPOSE: Our previous high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry study identified bladder cancer (BCA)-specific urine metabolites, including carnitine, acylcarnitines, and melatonin. The objective of the current study was to determine which metabolic pathways are perturbed in BCA, based on our previously identified urinary metabolome. MATERIALS AND METHODS: A total of 135 primary BCA samples and 26 control tissue samples from healthy volunteers were analyzed. The association between specific urinary metabolites and their related encoding genes was analyzed. RESULTS: Significant alterations in the carnitine-acylcarnitine and tryptophan metabolic pathways were detected in urine specimens from BCA patients compared to those of healthy controls. The expression of eight genes involved in the carnitine-acylcarnitine metabolic pathway (CPT1A, CPT1B, CPT1C, CPT2, SLC25A20, and CRAT) or tryptophan metabolism (TPH1 and IDO1) was assessed by RT-PCR in our BCA cohort (n=135). CPT1B, CPT1C, SLC25A20, CRAT, TPH1, and IOD1 were significantly downregulated in tumor tissues compared to normal bladder tissues (p<0.05 all) of patients with non-muscle invasive BCA, whereas CPT1B, CPT1C, CRAT, and TPH1 were downregulated in those with muscle invasive BCA (p<0.05), with no changes in IDO1 expression. CONCLUSION: Alterations in the expression of genes associated with the carnitine-acylcarnitine and tryptophan metabolic pathways, which were the most perturbed pathways in BCA, were determined.
Aged
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Biomarkers/metabolism
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Carcinoma, Transitional Cell/genetics/*metabolism/pathology
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Carnitine/*analogs & derivatives/genetics/metabolism
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Case-Control Studies
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Female
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Humans
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Male
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Metabolic Networks and Pathways/*physiology
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Middle Aged
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RNA, Messenger/metabolism
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Real-Time Polymerase Chain Reaction
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Urinary Bladder Neoplasms/genetics/*metabolism/pathology
3.Urinary Nucleic Acid TSPAN13-to-S100A9 Ratio as a Diagnostic Marker in Prostate Cancer.
Chunri YAN ; Ye Hwan KIM ; Ho Won KANG ; Sung Phil SEO ; Pildu JEONG ; Il Seok LEE ; Dongho KIM ; Jung Min KIM ; Yung Hyun CHOI ; Sung Kwon MOON ; Seok Joong YUN ; Wun Jae KIM
Journal of Korean Medical Science 2015;30(12):1784-1792
The potential use of urinary nucleic acids as diagnostic markers in prostate cancer (PCa) was evaluated. Ninety-five urine samples and 234 prostate tissue samples from patients with PCa and benign prostatic hyperplasia (BPH) were analyzed. Micro-array analysis was used to identify candidate genes, which were verified by the two-gene expression ratio and validated in tissue mRNA and urinary nucleic acid cohorts. Real-time quantitative polymerase chain reaction (qPCR) was used to measure urinary nucleic acid levels and tissue mRNA expression. The TSPAN13-to-S100A9 ratio was selected to determine the diagnostic value of urinary nucleic acids in PCa (P = 0.037) and shown to be significantly higher in PCa than in BPH in the mRNA and nucleic acid cohort analyses (P < 0.001 and P = 0.013, respectively). Receiver operating characteristic (ROC) analysis showed that the area under the ROC curve was 0.898 and 0.676 in tissue mRNA cohort and urinary nucleic acid cohort, respectively. The TSPAN13-to-S100A9 ratio showed a strong potential as a diagnostic marker for PCa. The present results suggest that the analysis of urine supernatant can be used as a simple diagnostic method for PCa that can be adapted to the clinical setting in the future.
Aged
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Aged, 80 and over
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Biomarkers, Tumor/*genetics/*urine
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Calgranulin B/*genetics
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Cohort Studies
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Humans
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Male
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Middle Aged
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Nucleic Acids/*genetics/*urine
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Oligonucleotide Array Sequence Analysis
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Prostate/metabolism
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Prostatic Hyperplasia/diagnosis/genetics/urine
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Prostatic Neoplasms/diagnosis/*genetics/*urine
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RNA, Messenger/genetics/metabolism
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RNA, Neoplasm/genetics/metabolism
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ROC Curve
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Real-Time Polymerase Chain Reaction
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Tetraspanins/*genetics
4.CDC6 mRNA Expression Is Associated with the Aggressiveness of Prostate Cancer.
Ye Hwan KIM ; Young Joon BYUN ; Won Tae KIM ; Pildu JEONG ; Chunri YAN ; Ho Won KANG ; Yong June KIM ; Sang Cheol LEE ; Sung Kwon MOON ; Yung Hyun CHOI ; Seok Joong YUN ; Wun Jae KIM
Journal of Korean Medical Science 2018;33(47):e303-
BACKGROUND: Cell division cycle 6 (CDC6) is an essential regulator of DNA replication and plays important roles in the activation and maintenance of the checkpoint mechanisms in the cell cycle. CDC6 has been associated with oncogenic activities in human cancers; however, the clinical significance of CDC6 in prostate cancer (PCa) remains unclear. Therefore, we investigated whether the CDC6 mRNA expression level is a diagnostic and prognostic marker in PCa. METHODS: The study subjects included 121 PCa patients and 66 age-matched benign prostatic hyperplasia (BPH) patients. CDC6 expression was evaluated using real-time polymerase chain reaction and immunohistochemical (IH) staining, and then compared according to the clinicopathological characteristics of PCa. RESULTS: CDC6 mRNA expression was significantly higher in PCa tissues than in BPH control tissues (P = 0.005). In addition, CDC6 expression was significantly higher in patients with elevated prostate-specific antigen (PSA) levels (> 20 ng/mL), a high Gleason score, and advanced stage than in those with low PSA levels, a low Gleason score, and earlier stage, respectively. Multivariate logistic regression analysis showed that high expression of CDC6 was significantly associated with advanced stage (≥ T3b) (odds ratio [OR], 3.005; confidence interval [CI], 1.212–7.450; P = 0.018) and metastasis (OR, 4.192; CI, 1.079–16.286; P = 0.038). Intense IH staining for CDC6 was significantly associated with a high Gleason score and advanced tumor stage including lymph node metastasis stage (linear-by-linear association, P = 0.044 and P = 0.003, respectively). CONCLUSION: CDC6 expression is associated with aggressive clinicopathological characteristics in PCa. CDC6 may be a potential diagnostic and prognostic marker in PCa patients.
Cell Cycle
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DNA Replication
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Gene Expression
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Humans
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Logistic Models
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Lymph Nodes
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Neoplasm Grading
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Neoplasm Metastasis
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Passive Cutaneous Anaphylaxis
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Prostate*
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Prostate-Specific Antigen
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Prostatic Hyperplasia
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Prostatic Neoplasms*
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Real-Time Polymerase Chain Reaction
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RNA, Messenger*
5.Urinary MicroRNAs of Prostate Cancer: Virus-Encoded hsv1-miRH18 and hsv2-miR-H9-5p Could Be Valuable Diagnostic Markers.
Seok Joong YUN ; Pildu JEONG ; Ho Won KANG ; Ye Hwan KIM ; Eun Ah KIM ; Chunri YAN ; Young Ki CHOI ; Dongho KIM ; Jung Min KIM ; Seon Kyu KIM ; Seon Young KIM ; Sang Tae KIM ; Won Tae KIM ; Ok Jun LEE ; Gou Young KOH ; Sung Kwon MOON ; Isaac Yi KIM ; Jayoung KIM ; Yung Hyun CHOI ; Wun Jae KIM
International Neurourology Journal 2015;19(2):74-84
PURPOSE: MicroRNAs (miRNAs) in biological fluids are potential biomarkers for the diagnosis and assessment of urological diseases such as benign prostatic hyperplasia (BPH) and prostate cancer (PCa). The aim of the study was to identify and validate urinary cell-free miRNAs that can segregate patients with PCa from those with BPH. METHODS: In total, 1,052 urine, 150 serum, and 150 prostate tissue samples from patients with PCa or BPH were used in the study. A urine-based miRNA microarray analysis suggested the presence of differentially expressed urinary miRNAs in patients with PCa, and these were further validated in three independent PCa cohorts, using a quantitative reverse transcriptionpolymerase chain reaction analysis. RESULTS: The expression levels of hsa-miR-615-3p, hsv1-miR-H18, hsv2-miR-H9-5p, and hsa-miR-4316 were significantly higher in urine samples of patients with PCa than in those of BPH controls. In particular, herpes simplex virus (hsv)-derived hsv1-miR-H18 and hsv2-miR-H9-5p showed better diagnostic performance than did the serum prostate-specific antigen (PSA) test for patients in the PSA gray zone. Furthermore, a combination of urinary hsv2-miR-H9-5p with serum PSA showed high sensitivity and specificity, providing a potential clinical benefit by reducing unnecessary biopsies. CONCLUSIONS: Our findings showed that hsv-encoded hsv1-miR-H18 and hsv2-miR-H9-5p are significantly associated with PCa and can facilitate early diagnosis of PCa for patients within the serum PSA gray zone.
Biomarkers
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Biopsy
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Cohort Studies
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Diagnosis
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Early Diagnosis
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Herpes Simplex
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Humans
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Microarray Analysis
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MicroRNAs*
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Passive Cutaneous Anaphylaxis
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Prostate
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Prostate-Specific Antigen
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Prostatic Hyperplasia
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Prostatic Neoplasms*
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Sensitivity and Specificity
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Simplexvirus
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Urologic Diseases
6.Erratum: Increased Expression of Herpes Virus-Encoded hsv1-miR-H18 and hsv2-miR-H9-5p in Cancer-Containing Prostate Tissue Compared to That in Benign Prostate Hyperplasia Tissue.
Seok Joong YUN ; Pildu JEONG ; Ho Won KANG ; Helen Ki SHINN ; Ye Hwan KIM ; Chunri YAN ; Young Ki CHOI ; Dongho KIM ; Dong Hee RYU ; Yun Sok HA ; Tae Hwan KIM ; Tae Gyun KWON ; Jung Min KIM ; Sang Heon SUH ; Seon Kyu KIM ; Seon Young KIM ; Sang Tae KIM ; Won Tae KIM ; Ok Jun LEE ; Sung Kwon MOON ; Nam Hyung KIM ; Isaac Yi KIM ; Jayoung KIM ; Hee Jae CHA ; Yung Hyun CHOI ; Eun Jong CHA ; Wun Jae KIM
International Neurourology Journal 2016;20(4):374-374
In this article, a part of fund and grant supports was omitted unintentionally.
7.Increased Expression of Herpes Virus-Encoded hsv1-miR-H18 and hsv2-miR-H9-5p in Cancer-Containing Prostate Tissue Compared to That in Benign Prostate Hyperplasia Tissue.
Seok Joong YUN ; Pildu JEONG ; Ho Won KANG ; Helen Ki SHINN ; Ye Hwan KIM ; Chunri YAN ; Young Ki CHOI ; Dongho KIM ; Dong Hee RYU ; Yun Sok HA ; Tae Hwan KIM ; Tae Gyun KWON ; Jung Min KIM ; Sang Heon SUH ; Seon Kyu KIM ; Seon Young KIM ; Sang Tae KIM ; Won Tae KIM ; Ok Jun LEE ; Sung Kwon MOON ; Nam Hyung KIM ; Isaac Yi KIM ; Jayoung KIM ; Hee Jae CHA ; Yung Hyun CHOI ; Eun Jong CHA ; Wun Jae KIM
International Neurourology Journal 2016;20(2):122-130
PURPOSE: Previously, we reported the presence of virus-encoded microRNAs (miRNAs) in the urine of prostate cancer (CaP) patients. In this study, we investigated the expression of two herpes virus-encoded miRNAs in prostate tissue. METHODS: A total of 175 tissue samples from noncancerous benign prostatic hyperplasia (BPH), 248 tissue samples from patients with CaP and BPH, and 50 samples from noncancerous surrounding tissues from these same patients were analyzed for the expression of two herpes virus-encoded miRNAs by real-time polymerase chain reaction (PCR) and immunocytochemistry using nanoparticles as molecular beacons. RESULTS: Real-time reverse transcription-PCR results revealed significantly higher expression of hsv1-miR-H18 and hsv2-miRH9- 5p in surrounding noncancerous and CaP tissues than that in BPH tissue (each comparison, P<0.001). Of note, these miRNA were expressed equivalently in the CaP tissues and surrounding noncancerous tissues. Moreover, immunocytochemistry clearly demonstrated a significant enrichment of both hsv1-miR-H18 and hsv2-miR-H9 beacon-labeled cells in CaP and surrounding noncancerous tissue compared to that in BPH tissue (each comparison, P<0.05 for hsv1-miR-H18 and hsv2- miR-H9). CONCLUSIONS: These results suggest that increased expression of hsv1-miR-H18 and hsv2-miR-H95p might be associated with tumorigenesis in the prostate. Further studies will be required to elucidate the role of these miRNAs with respect to CaP and herpes viral infections.
Carcinogenesis
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Herpesviridae
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Humans
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Hyperplasia*
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Immunohistochemistry
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MicroRNAs
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Nanoparticles
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Prostate*
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Prostatic Hyperplasia
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Prostatic Neoplasms
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Real-Time Polymerase Chain Reaction