1.Implementation of eye movement tracking system based on camshift algorithm.
Chun-Rui HUANG ; Xue-Quan LV ; Ji ZHAO ; Qiu-Shi REN ; Xin-Yu CHAI
Chinese Journal of Medical Instrumentation 2009;33(4):239-242
In this article, the implementation of eye movement tracking system includes three procedures: hardware acquisition, data extraction and overall analysis. The system is based on Camshift algorithm with an eye tracking module added, developed on VC++ 6.0. The system can track the eye movement effectively in simulated phosphene evaluation experiment based on prosthetic vision.
Algorithms
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Analysis of Variance
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Eye Movements
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physiology
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Prosthesis Design
2.Correlation of gene expression related to amount of ginseng saponin in 15 tissues and 6 kinds of ginseng saponin biosynthesis.
Kang-yu WANG ; Mei-ping ZHANG ; Chuang LI ; Shi-cui JIANG ; Rui YIN ; Chun-yu SUN ; Yi WANG
China Journal of Chinese Materia Medica 2015;40(16):3168-3173
Fifteen tissues of 4-year-old fruit repining stage Jilin ginseng were chosen as materials, six kinds of monomer saponins (ginsenosides Rg1, Re, Rb1, Rc, Rb2 and Rd) content in 15 tissues was measured by HPLC and vanillin-sulfuric acid method. The relative expression of FPS, SQS, SQE, OSC, β-AS and P450 genes in 15 tissues was analyzed by real-time PCR. The correlations between ginseng saponin content in 15 tissues of Jilin ginseng and biosynthetic pathway -related genes were obtained. The results showed that was a synergistic increase and decrease trend of positive linear correlation among six kinds of monomer saponin content, and there was a significantly (P < 0.01) positive correlation between monomer saponin content and total saponins content. Monomer saponin content and 6 kinds of enzyme gene correlation were different. Biosynthesis of ginseng total saponins and monomer saponin were regulated by six kinds of participation ginsenoside biosynthesis enzyme genes, the expression of these six kinds of genes in different tissues of ginseng showed collaborative increase and decrease trend, and regulated biosynthesis of ginseng ginsenoside by group coordinative manner.
Drugs, Chinese Herbal
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analysis
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Gene Expression Profiling
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Panax
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chemistry
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genetics
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metabolism
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Plant Proteins
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genetics
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metabolism
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Plant Structures
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chemistry
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genetics
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metabolism
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Plants, Medicinal
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chemistry
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genetics
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metabolism
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Saponins
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analysis
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metabolism
3.Construction and identification of recombinant baculovirus vector to coexpress GDNF and EGFP gene
Yan-chun, CHEN ; Jun, WANG ; Shi-li, WANG ; Chang-ping, CAI ; Biao, LI ; Yi-fan, ZHANG ; Rui, GUO
Journal of Shanghai Jiaotong University(Medical Science) 2009;29(7):821-824
Objective To construct a novel enhanced green fluorescent protein (EGFP) and glial cell line-derived neurotrophic factor (GDNF) recombinant baculovirus. Methods The target gene(EGFP and GDNF) was cloned into baculovirus transfer vector pFastBacDual, pFB-EGFP-GDNF was constructed and restriction enzyme analysis was conducted. pFB-EGFP-GDNF was transposited with baculovirus shuttle vector (Bacmid) into DH10Bac competent cells, and recombination baculovirus vector Bacmid-EGFP-GDNF was constructed. The plasmid was extracted and PCR was performed for identification. Bacmid-EGFP-GDNF was transfected with Sf9 insect cell package virus by liposomal transfection method. Immunofluorescent staining was employed to detect the expression of EGFP and GDNF protein in St9 cells. Results The target gene fragment was correctly cloned into pFastBaeDual vector, and recombinant Bacmid was constructed. Bacmid-EGFP-GDNF was successfully transfected, and higher virus titer was obtained. The coexpression of GDNF and EGFP protein in Sf9 cells was identified by immunofluorescent staining. Conclusion The recombinant baculovirus Bacmid-EGFP-GDNF can be successfully constructed, and the protein of EGFP and GDNF is coexpressed in St9 cells, which paves a way for the research of GDNF gene therapy.
4.Association between p53 gene codon 72 polymorphism and keloid in Chinese population.
Li YAN ; Xiao-yan LÜ ; Chun-mei WANG ; Rui CAO ; Yan-hua YIN ; Chun-shi JIA ; Qiang ZHUANG
Chinese Journal of Plastic Surgery 2007;23(5):428-430
OBJECTIVETo investigate the relationship between p53 gene codon 72 polymorphism and genetic predisposition to keloid in Chinese population.
METHODSPCR-based restriction fragment length polymorphism (PCR-RFLP) analysis was used to detect p53 gene codon 72 genotypes of 60 keloid samples and 102 whole blood samples from healthy controls in China.
RESULTSThere was no significant difference in the distribution of p53 gene codon 72 polymorphism between the keloid patients and the healthy controls (X2 = 2.910, P = 0.233), nor did the frequencies for Pro and Arg alleles (X2 = 0.882, P = 0.348), and there was no significant difference in the distribution of p53 gene codon 72 polymorphism in keloid patients and normal controls from China and Japan respectively (X2 = 3.942, P = 0.139; X2 = 3.260, P = 0.196). But the Arg/Arg genotype was significantly higher than the Pro/Pro genotype among the patients with keloid in shoulder and back (P < 0.01).
CONCLUSIONSThere was no significant association between the distribution of p53 gene codon 72 polymorphism and keloid in Chinese population, but Arg/Arg genotype may affect the formation of keloids in shoulder and back compared to others. Further research should be done to investigate the relationship between p53 gene codon 72 polymorphism and keloids in different sites.
Asian Continental Ancestry Group ; genetics ; Codon ; genetics ; Female ; Humans ; Keloid ; genetics ; Male ; Polymorphism, Restriction Fragment Length ; Tumor Suppressor Protein p53 ; genetics
5.Comparison of STR-PCR and FISH value for monitoring chimerism after sex-mismatched allogeneic hematopoietic stem cell transplantation.
You-Wen QIN ; Ying JIANG ; Xiao-Rui WANG ; Li-Ping WAN ; Shi-Ke YAN ; Chun WANG
Journal of Experimental Hematology 2009;17(4):1016-1020
This study was purposed to compare the significance of multiplex short tandem repeat polymerase chain reaction (STR-PCR) and fluorescent in situ hybridization (FISH) for monitoring chimerism after sex-mismatched allogeneic hematopoietic stem cell transplantation (allo-HSCT). The chimerism of bone marrow or peripheral blood cells from 38 patients was analyzed by STR-PCR and FISH on days 14, 28 and at 3 months after allo-HSCT. The results indicated that on day 14, the complete chimerism (CC) was detected in 14 of 30 cases by STR-PCR and in 8 of 30 cases by FISH (p > 0.05). On day 28, the CC was detected in 26 of 31 cases by STR-PCR and in 15 of 31 cases by FISH (p < 0.01). At 3 months, the CC was observed in 22 of 24 cases by STR-PCR and 17 of 24 cases by FISH (p > 0.05). 14 cases were found to have a graft rejection or relapse among 28 cases which were continuously monitored more than 3 months post the transplants. Donor cell decrease in 9 of 14 cases was proved by FISH alone. It is concluded that FISH is more sensitive than STR-PCR in early monitoring chimerism status of post-transplant and in predicting graft rejection or disease relapse.
Adolescent
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Adult
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Child
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Female
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Hematopoietic Stem Cell Transplantation
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methods
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Humans
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In Situ Hybridization, Fluorescence
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methods
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Male
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Microsatellite Repeats
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Middle Aged
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Polymerase Chain Reaction
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methods
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Transplantation Chimera
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Transplantation, Homologous
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Young Adult
6.Systematic review of randomized controlled trials of acupuncture for glaucoma.
Rui GAO ; Chun-Hu SHI ; Jin-Hui TIAN ; Zhen KANG
Chinese Acupuncture & Moxibustion 2011;31(12):1142-1145
OBJECTIVETo assess the efficacy of acupuncture for glaucoma.
METHODSThe search was conducted through database to identify randomized controlled trials of acupuncture for glaucoma until September 2010. The quality assessment, data extraction and Meta-analysis were performed by Cochrane Handbook for Systematic Re views of Interventions.
RESULTSEight articles were included. Meta-analysis showed that acupuncture did not decrease intraocular pressure compared with eye drops [SMD = -0.1 66, 95% CI (-1.45, 0.13)]. However, acupuncture increased the effectiveness rate of treatment for glaucoma [OR = 4.45, 95% CI (1.96,10.09)]. Compared with placebo, acupuncture did not decrease intraocular pressure 20 min after acupuncture (P = 0.13) and 24 hours after acupuncture (P = 0.21). Nonetheless, acupuncture increased the effectiveness rate of treatment for glaucoma [OR = 45.00, 95% CI (9.73, 208.08)]. Compared with acupuncture, quantitative acupuncture manipulation increased the effectiveness rates of treatment for glaucoma [OR = 2.23, 95% CI (1.14, 4.36)].
CONCLUSIONAcupuncture therapy has potential to increase effectiveness rates of treatment for glaucoma. It lacks reliable evidence to prove that acupuncture decreases intraocular pressure. More trials with high quality are needed to estimate adverse effects and cost effectiveness of acupuncture therapy.
Acupuncture Therapy ; Glaucoma ; drug therapy ; therapy ; Humans ; Ophthalmic Solutions ; therapeutic use ; Randomized Controlled Trials as Topic ; Treatment Outcome
7.Three-dimensional finite element analysis on mechanical behavior of the bone remodeling and bone integration between the bone-implant interface after hip replacement.
Yong-Jiang LI ; Li-Cheng ZHANG ; Mei-Chao ZHANG ; Guo-Jing YANG ; Rui-Xin LIN ; Chun-Yuan CAI ; Shi-Zhen ZHONG
China Journal of Orthopaedics and Traumatology 2014;27(4):316-320
OBJECTIVETo discuss the primary stability of the fixed interface between the cementless prosthesis and femur, and its influence on bone ingrowth and secondary stability under the roughened surface and press fit of different prostheses by finite element analysis.
METHODS:A three-dimensional finite element module of total hip arthroplasty (THA) was developed with Mimics software. There was a collection of data when simulating hip arthroplasty. The frictional coefficient between the fixed interface was 0,0.15,0.40 and 1.00 representing the roughness of prosthesis surface. The press fit was 0, 0.01,0.05 and 0.10 mm according to the operation. The Vion Mises stress distribution and the contact pressure,friction stress and relative sliding displacement between the interface were analysed and compared when simulating the maneuver of climbing stairs.
RESULTSAt a fixed press fit of 0.05 mm,the contact pressure between the interface was 230 , 231, 222 and 275 MN under four different frictional coefficient (0,0. 15,0.40 and 1.00) with little change; the relative sliding displacement was 0.529, 0.129, 0.107 and 0.087 mm with a consistent and obvious decline. As the fixed frictional coefficient was 0.40,the contact pressure between the interface were 56.0,67.7 ,60.4 and 49.6 MN under four different press fit (0, 0.01, 0.05 and 0.10 mm) with a reduction; the relative sliding displacement was 0.064,0.062,0.043 and 0.042 mm with an obvious decline, and there was a maximal friction stress when press fit of 0.01 mm.
CONCLUSIONThere is a dynamic process of the bone remodeling and bone integration between the interface after hip replacement, determining the long-term outcome. The interface clearance and the frictional coefficient are the key factors of the bone integration.
Arthroplasty, Replacement, Hip ; Biomechanical Phenomena ; Bone Remodeling ; Bone and Bones ; chemistry ; physiopathology ; surgery ; Elasticity ; Finite Element Analysis ; Humans ; Models, Biological ; Stress, Mechanical
8.HPLC fingerprint of liuwei dihuang soft capsule.
Wei SHI ; Jia-Chun LI ; Su-De YANG ; Yun LI ; Rui-Ting JIN ; Xian-Ling SUN ; Zhen-Zhong WANG ; Yu-An BI ; Wei XIAO
China Journal of Chinese Materia Medica 2014;39(23):4625-4628
In order to establish HPLC fingerprint of Liuwei Dihuang soft capsule, and to provide certain reference for an quality control of it, the HPLC method was performed on an Agilent C18 (4.6 mm x 250 mm, 5 μm) column with acetonitrile-0.02% trifluoroacetic acid as mobile phase, gradient elution volume flow of 1.0 mL x min(-1), column temperature was 30 degrees C, detection wavelength: 0-60 min, 238 nm, 60-70 min, 210 nm. The software for chromatographic fingerprint was applied to analysis different batches of Liuwei Dihuang soft capsule samples. Sixteen mutual peaks were selected as the fingerprint peaks in 12 samples with loganin as the reference peak, and all of the detected peaks were separated effectively. Cluster analysis (HCA) and similarity analysis (SA) were done based on data of 12 samples clustering analysis of 12 batches of samples were divided into 2 categories. Including 7 for the first class, the rest was second, similarities calculated by SA were all above 0.92, indicating a good similarity between the reference and twelve batches of samples, also, the analysis results of HCA and SA basically the same. This method is simple with good precision, repeatability and stability, and provides the basis for Liuwei Dihuang soft capsule quality control.
Capsules
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analysis
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Chromatography, High Pressure Liquid
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methods
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Drugs, Chinese Herbal
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analysis
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Quality Control
9.Applications of lipidomics in disease biomarkers discovery
Lei SHI ; Rui-Chen GUO ; Chun-Min WEI
The Chinese Journal of Clinical Pharmacology 2014;(11):1041-1044
To clarify the lipid′s effects on diagnosis and treatment of dis-eases and to enhance the ability to predict the disease risks in advance, lipidomics focuses on the structures and functions of lipids and their me-tabolites.Common analytical methods include direct mass spectrometers ( shotgun lipidomics) or chromatography-mass spectrometers and nuclear magnetic resonance.Lipidomics plays an important role in early diagnosis of disease, biomarker discoveries, new drug development and system study.This article reviewed the applications of lipidomics in biomarkers discovery and the technical approaches in lipidome analysis.
10.Diagnosis and differential diagnosis of urachal carcinoma by computed tomography
Shi-Jun ZHAO ; Ling-Xia JIANG ; Jing-Rui DAI ; Chun-Wu ZHOU
Chinese Journal of Oncology 2008;30(1):59-62
Objective To analyze CT imaging characteristics of urachal carcinoma. Methods CT findings of 18 pathologically proven urachal masses were retrospectively reviewed. Results Of these 18 cases, 15 were urachal carcinomas, while 3 were inflammatory masses. All 18 masses were situated in the midline of the Retzius space along the course of the urachns, and 17 of those in the juxtavesical portion of the urachus, and only 1 close to the umbilical end. The urachal carcinomas presented as mixed cystic-solid lesions(n=11)or completely solid masses (n=4). Calcification was radiologically visible in 6 cases, and presented as punctate, stippled, or curvilinear in the peripheral or central area of the lesions. Of the 3 inflammatory lesions, 1 infected urachal cyst looked like a thick-walled cystic lesion, 2 chronic inflammatory granulomas manifested as irregular soft tissue masses, and apparently infiltrated into the surrounding adipose tissue. Condusiou Urachal carcinoma has its own characteristics on the CT image, which is helpful in diagnosis.